RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 MYT1Q01538 1121 aa30.83■■■□□ 2.53
TSEN54-205ENST00000578415 COL14A1Q05707 1796 aaKnown RBP30.83■■■□□ 2.53
TSEN54-205ENST00000578415 NGDNQ8NEJ9 315 aaKnown RBP30.82■■■□□ 2.52
TSEN54-205ENST00000578415 STAC3Q96MF2 364 aa30.82■■■□□ 2.52
TSEN54-205ENST00000578415 CRYBG1Q9Y4K1 1723 aa30.8■■■□□ 2.52
TSEN54-205ENST00000578415 ATP7BP35670 1465 aa30.79■■■□□ 2.52
TSEN54-205ENST00000578415 SPATA31A5Q5VU36 1347 aa30.78■■■□□ 2.52
TSEN54-205ENST00000578415 SPATA31A7Q8IWB4 1347 aa30.78■■■□□ 2.52
TSEN54-205ENST00000578415 PAK3O75914 559 aaPredicted RBP30.78■■■□□ 2.52
TSEN54-205ENST00000578415 ARHGEF28Q8N1W1 1705 aaKnown RBP30.76■■■□□ 2.51
TSEN54-205ENST00000578415 NUDT16Q96DE0 195 aaKnown RBP30.75■■■□□ 2.51
TSEN54-205ENST00000578415 PRDM11Q9NQV5 511 aa30.75■■■□□ 2.51
TSEN54-205ENST00000578415 BAG6P46379 1132 aa30.74■■■□□ 2.51
TSEN54-205ENST00000578415 HRCP23327 699 aa30.72■■■□□ 2.51
TSEN54-205ENST00000578415 FAM182BQ5T319 152 aa30.72■■■□□ 2.51
TSEN54-205ENST00000578415 THSD7AQ9UPZ6 1657 aa30.71■■■□□ 2.51
TSEN54-205ENST00000578415 KIAA0232Q92628 1395 aa30.7■■■□□ 2.51
TSEN54-205ENST00000578415 ITSN1Q15811 1721 aa30.69■■■□□ 2.5
TSEN54-205ENST00000578415 CDK19Q9BWU1 502 aa30.68■■■□□ 2.5
TSEN54-205ENST00000578415 LRP5O75197 1615 aa30.68■■■□□ 2.5
TSEN54-205ENST00000578415 PSDA5PKW4 1024 aaPredicted RBP30.67■■■□□ 2.5
TSEN54-205ENST00000578415 CHRNA2Q15822 529 aa30.67■■■□□ 2.5
TSEN54-205ENST00000578415 EN1Q05925 392 aaPredicted RBP30.66■■■□□ 2.5
TSEN54-205ENST00000578415 SPATA31A1Q5TZJ5 1347 aa30.66■■■□□ 2.5
TSEN54-205ENST00000578415 POLR3AO14802 1390 aaPredicted RBP30.66■■■□□ 2.5
TSEN54-205ENST00000578415 PHRF1Q9P1Y6 1649 aaKnown RBP30.65■■■□□ 2.5
TSEN54-205ENST00000578415 NUTM2GQ5VZR2 741 aa30.64■■■□□ 2.5
TSEN54-205ENST00000578415 RGPD1P0DJD0 1748 aa30.63■■■□□ 2.49
TSEN54-205ENST00000578415 ACEP12821 1306 aa30.63■■■□□ 2.49
TSEN54-205ENST00000578415 DISP2A7MBM2 1401 aa30.63■■■□□ 2.49
TSEN54-205ENST00000578415 TOPAZ1Q8N9V7 1692 aa30.62■■■□□ 2.49
TSEN54-205ENST00000578415 ZC3H6P61129 1189 aaKnown RBP30.62■■■□□ 2.49
TSEN54-205ENST00000578415 NBPF8Q3BBV2 869 aa30.61■■■□□ 2.49
TSEN54-205ENST00000578415 STRN4Q9NRL3 753 aa30.61■■■□□ 2.49
TSEN54-205ENST00000578415 CCDC61Q9Y6R9 512 aa30.61■■■□□ 2.49
TSEN54-205ENST00000578415 PLEKHG3A1L390 1219 aa30.59■■■□□ 2.49
TSEN54-205ENST00000578415 TNS1Q9HBL0 1735 aaKnown RBP30.58■■■□□ 2.49
TSEN54-205ENST00000578415 NRKQ7Z2Y5 1582 aa30.55■■■□□ 2.48
TSEN54-205ENST00000578415 NBPF1Q3BBV0 1214 aa30.55■■■□□ 2.48
TSEN54-205ENST00000578415 KIAA1210Q9ULL0 1709 aa30.55■■■□□ 2.48
TSEN54-205ENST00000578415 SSH2Q76I76 1423 aa30.55■■■□□ 2.48
TSEN54-205ENST00000578415 EZH2Q15910 746 aaKnown RBP30.54■■■□□ 2.48
TSEN54-205ENST00000578415 R3HDM1Q15032 1099 aaKnown RBP30.53■■■□□ 2.48
TSEN54-205ENST00000578415 FAM196AQ6ZSG2 479 aa30.53■■■□□ 2.48
TSEN54-205ENST00000578415 USP35Q9P2H5 1018 aa30.53■■■□□ 2.48
TSEN54-205ENST00000578415 USP19O94966 1318 aa30.52■■■□□ 2.48
TSEN54-205ENST00000578415 TRIM37O94972 964 aa30.52■■■□□ 2.48
TSEN54-205ENST00000578415 BARGINQ6ZT62 677 aa30.52■■■□□ 2.48
TSEN54-205ENST00000578415 ABTB2Q8N961 1025 aa30.52■■■□□ 2.48
TSEN54-205ENST00000578415 CPDO75976 1380 aa30.52■■■□□ 2.48
TSEN54-205ENST00000578415 CAMTA1Q9Y6Y1 1673 aa30.52■■■□□ 2.48
TSEN54-205ENST00000578415 CAMKK2Q96RR4 588 aa30.51■■■□□ 2.47
TSEN54-205ENST00000578415 EVA1CP58658 441 aa30.5■■■□□ 2.47
TSEN54-205ENST00000578415 LARP1Q6PKG0 1096 aaKnown RBP30.49■■■□□ 2.47
TSEN54-205ENST00000578415 LMO7Q8WWI1 1683 aa30.49■■■□□ 2.47
TSEN54-205ENST00000578415 PPIP5K1Q6PFW1 1433 aa30.47■■■□□ 2.47
TSEN54-205ENST00000578415 SRPK2P78362 688 aaKnown RBP30.45■■■□□ 2.47
TSEN54-205ENST00000578415 TCP11L2Q8N4U5 519 aa30.45■■■□□ 2.47
TSEN54-205ENST00000578415 CENPJQ9HC77 1338 aaPredicted RBP30.45■■■□□ 2.46
TSEN54-205ENST00000578415 APBA3O96018 575 aa30.44■■■□□ 2.46
TSEN54-205ENST00000578415 GCP02774 474 aa30.44■■■□□ 2.46
TSEN54-205ENST00000578415 PDE3BQ13370 1112 aa30.44■■■□□ 2.46
TSEN54-205ENST00000578415 CABP2Q9NPB3 220 aa30.44■■■□□ 2.46
TSEN54-205ENST00000578415 NLRP13Q86W25 1043 aa30.43■■■□□ 2.46
TSEN54-205ENST00000578415 PARD3Q8TEW0 1356 aa30.42■■■□□ 2.46
TSEN54-205ENST00000578415 COL5A2P05997 1499 aaPredicted RBP30.39■■■□□ 2.46
TSEN54-205ENST00000578415 THRAP3Q9Y2W1 955 aaKnown RBP30.39■■■□□ 2.46
TSEN54-205ENST00000578415 BRD4O60885 1362 aaPredicted RBP30.39■■■□□ 2.45
TSEN54-205ENST00000578415 USP6P35125 1406 aa30.37■■■□□ 2.45
TSEN54-205ENST00000578415 CABP1Q9NZU7 370 aa30.36■■■□□ 2.45
TSEN54-205ENST00000578415 RREB1Q92766 1687 aa30.34■■■□□ 2.45
TSEN54-205ENST00000578415 QRICH2Q9H0J4 1663 aa30.33■■■□□ 2.45
TSEN54-205ENST00000578415 CRB1P82279 1406 aa30.33■■■□□ 2.45
TSEN54-205ENST00000578415 SLIT3O75094 1523 aa30.32■■■□□ 2.44
TSEN54-205ENST00000578415 PARP4Q9UKK3 1724 aaKnown RBP30.31■■■□□ 2.44
TSEN54-205ENST00000578415 NLRP6P59044 892 aa30.31■■■□□ 2.44
TSEN54-205ENST00000578415 AATKQ6ZMQ8 1374 aa30.3■■■□□ 2.44
TSEN54-205ENST00000578415 NUP188Q5SRE5 1749 aa30.3■■■□□ 2.44
TSEN54-205ENST00000578415 ZBTB7CA1YPR0 619 aa30.29■■■□□ 2.44
TSEN54-205ENST00000578415 L3MBTL2Q969R5 705 aa30.29■■■□□ 2.44
TSEN54-205ENST00000578415 NBPF14Q5TI25 921 aa30.25■■■□□ 2.43
TSEN54-205ENST00000578415 PIK3C2AO00443 1686 aa30.25■■■□□ 2.43
TSEN54-205ENST00000578415 PEAK1Q9H792 1746 aa30.25■■■□□ 2.43
TSEN54-205ENST00000578415 OVOS2A0A0G2JMS6 1433 aa30.24■■■□□ 2.43
TSEN54-205ENST00000578415 OVOS2A0A0J9YW53 1432 aa30.24■■■□□ 2.43
TSEN54-205ENST00000578415 OVOS2Q6IE36 1432 aa30.24■■■□□ 2.43
TSEN54-205ENST00000578415 EVC2Q86UK5 1308 aa30.23■■■□□ 2.43
TSEN54-205ENST00000578415 C11orf95C9JLR9 678 aaPredicted RBP30.23■■■□□ 2.43
TSEN54-205ENST00000578415 LRRC37A3O60309 1634 aa30.22■■■□□ 2.43
TSEN54-205ENST00000578415 AXIN2Q9Y2T1 843 aa30.22■■■□□ 2.43
TSEN54-205ENST00000578415 COL18A1P39060 1754 aa30.21■■■□□ 2.43
TSEN54-205ENST00000578415 TOM1L2Q6ZVM7 507 aa30.21■■■□□ 2.43
TSEN54-205ENST00000578415 TRPM1Q7Z4N2 1603 aa30.19■■■□□ 2.42
TSEN54-205ENST00000578415 DDB1Q16531 1140 aa30.19■■■□□ 2.42
TSEN54-205ENST00000578415 CPSF1Q10570 1443 aaKnown RBP30.19■■■□□ 2.42
TSEN54-205ENST00000578415 WDR17Q8IZU2 1322 aa30.19■■■□□ 2.42
TSEN54-205ENST00000578415 TTC21BQ7Z4L5 1316 aa30.18■■■□□ 2.42
TSEN54-205ENST00000578415 ARHGEF25Q86VW2 580 aa30.17■■■□□ 2.42
TSEN54-205ENST00000578415 SIN3AQ96ST3 1273 aa30.17■■■□□ 2.42
TSEN54-205ENST00000578415 PTF1AQ7RTS3 328 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms