RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TNNT2P45379 298 aaPredicted RBP24.91■■□□□ 1.58
PRKCA-203ENST00000578063 HNRNPUQ00839 825 aaKnown RBP eCLIP24.9■■□□□ 1.588e-8■■■■□ 25.4
PRKCA-203ENST00000578063 PHF8Q9UPP1 1060 aa24.9■■□□□ 1.58
PRKCA-203ENST00000578063 TTC21AQ8NDW8 1320 aa24.9■■□□□ 1.58
PRKCA-203ENST00000578063 SCAF1Q9H7N4 1312 aaKnown RBP24.9■■□□□ 1.58
PRKCA-203ENST00000578063 NME9Q86XW9 330 aa24.89■■□□□ 1.58
PRKCA-203ENST00000578063 ZNF335Q9H4Z2 1342 aaPredicted RBP24.88■■□□□ 1.57
PRKCA-203ENST00000578063 LRRC7Q96NW7 1537 aa24.87■■□□□ 1.57
PRKCA-203ENST00000578063 COG3Q96JB2 828 aa24.87■■□□□ 1.57
PRKCA-203ENST00000578063 MSH6P52701 1360 aa24.87■■□□□ 1.57
PRKCA-203ENST00000578063 ATF3P18847 181 aa24.86■■□□□ 1.57
PRKCA-203ENST00000578063 ESCO1Q5FWF5 840 aa24.86■■□□□ 1.57
PRKCA-203ENST00000578063 C1orf167Q5SNV9 1468 aa24.85■■□□□ 1.57
PRKCA-203ENST00000578063 MTHFSP49914 203 aa24.85■■□□□ 1.57
PRKCA-203ENST00000578063 WDR43Q15061 677 aaKnown RBP eCLIP24.85■■□□□ 1.57
PRKCA-203ENST00000578063 CFAP53Q96M91 514 aa24.85■■□□□ 1.57
PRKCA-203ENST00000578063 CADPS2Q86UW7 1296 aa24.84■■□□□ 1.57
PRKCA-203ENST00000578063 OVOS2A0A0J9YW53 1432 aa24.84■■□□□ 1.57
PRKCA-203ENST00000578063 OVOS2Q6IE36 1432 aa24.84■■□□□ 1.57
PRKCA-203ENST00000578063 MST1RQ04912 1400 aa24.83■■□□□ 1.57
PRKCA-203ENST00000578063 KIF1AQ12756 1690 aa24.83■■□□□ 1.57
PRKCA-203ENST00000578063 AATKQ6ZMQ8 1374 aa24.82■■□□□ 1.56
PRKCA-203ENST00000578063 BLMP54132 1417 aaPredicted RBP24.81■■□□□ 1.56
PRKCA-203ENST00000578063 XIRP1Q702N8 1843 aaKnown RBP24.81■■□□□ 1.56
PRKCA-203ENST00000578063 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
PRKCA-203ENST00000578063 ZRANB1Q9UGI0 708 aa24.8■■□□□ 1.56
PRKCA-203ENST00000578063 ZBED9Q6R2W3 1325 aa24.79■■□□□ 1.56
PRKCA-203ENST00000578063 SMG6Q86US8 1419 aaKnown RBP24.79■■□□□ 1.56
PRKCA-203ENST00000578063 ORAI2Q96SN7 254 aa24.78■■□□□ 1.56
PRKCA-203ENST00000578063 PIK3C2AO00443 1686 aa24.77■■□□□ 1.56
PRKCA-203ENST00000578063 ADAMTS8Q9UP79 889 aa24.77■■□□□ 1.56
PRKCA-203ENST00000578063 SHPRHQ149N8 1683 aa24.76■■□□□ 1.55
PRKCA-203ENST00000578063 PNPLA6Q8IY17 1366 aa24.76■■□□□ 1.55
PRKCA-203ENST00000578063 USP54Q70EL1 1684 aa24.76■■□□□ 1.55
PRKCA-203ENST00000578063 PSME1Q06323 249 aa24.75■■□□□ 1.55
PRKCA-203ENST00000578063 COL3A1P02461 1466 aaPredicted RBP24.75■■□□□ 1.55
PRKCA-203ENST00000578063 POLKQ9UBT6 870 aa24.74■■□□□ 1.55
PRKCA-203ENST00000578063 CDK12Q9NYV4 1490 aaPredicted RBP24.73■■□□□ 1.55
PRKCA-203ENST00000578063 PAK3O75914 559 aaPredicted RBP24.71■■□□□ 1.55
PRKCA-203ENST00000578063 FOXO3O43524 673 aa24.7■■□□□ 1.54
PRKCA-203ENST00000578063 ABTB2Q8N961 1025 aa24.7■■□□□ 1.54
PRKCA-203ENST00000578063 NLRP6P59044 892 aa24.69■■□□□ 1.54
PRKCA-203ENST00000578063 NUDCQ9Y266 331 aa24.69■■□□□ 1.54
PRKCA-203ENST00000578063 MAP2P11137 1827 aaKnown RBP24.68■■□□□ 1.54
PRKCA-203ENST00000578063 EMILIN1Q9Y6C2 1016 aa24.68■■□□□ 1.54
PRKCA-203ENST00000578063 FBLN1P23142 703 aa24.67■■□□□ 1.54
PRKCA-203ENST00000578063 TRPM3Q9HCF6 1732 aaPredicted RBP24.67■■□□□ 1.54
PRKCA-203ENST00000578063 DIAPH1O60610 1272 aaKnown RBP24.66■■□□□ 1.54
PRKCA-203ENST00000578063 PPM1GO15355 546 aaPredicted RBP24.66■■□□□ 1.54
PRKCA-203ENST00000578063 RRS1Q15050 365 aaKnown RBP24.66■■□□□ 1.54
PRKCA-203ENST00000578063 MARF1Q9Y4F3 1742 aaKnown RBP24.66■■□□□ 1.54
PRKCA-203ENST00000578063 NPHP3Q7Z494 1330 aa24.65■■□□□ 1.54
PRKCA-203ENST00000578063 KRT28Q7Z3Y7 464 aa24.65■■□□□ 1.54
PRKCA-203ENST00000578063 LTBP4Q8N2S1 1624 aa24.63■■□□□ 1.53
PRKCA-203ENST00000578063 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
PRKCA-203ENST00000578063 U2AF1L5P0DN76 240 aaPredicted RBP24.61■■□□□ 1.53
PRKCA-203ENST00000578063 U2AF1Q01081 240 aaKnown RBP eCLIP24.61■■□□□ 1.53
PRKCA-203ENST00000578063 XPCQ01831 940 aaPredicted RBP24.61■■□□□ 1.53
PRKCA-203ENST00000578063 NUTM2GQ5VZR2 741 aa24.61■■□□□ 1.53
PRKCA-203ENST00000578063 SBNO1A3KN83 1393 aa24.61■■□□□ 1.53
PRKCA-203ENST00000578063 BRINP3Q76B58 766 aa24.61■■□□□ 1.53
PRKCA-203ENST00000578063 KIF24Q5T7B8 1368 aa24.61■■□□□ 1.53
PRKCA-203ENST00000578063 U2SURPO15042 1029 aaKnown RBP24.59■■□□□ 1.53
PRKCA-203ENST00000578063 CCDC146Q8IYE0 955 aa24.59■■□□□ 1.53
PRKCA-203ENST00000578063 MAP3K19Q56UN5 1328 aa24.59■■□□□ 1.53
PRKCA-203ENST00000578063 SOX12O15370 315 aa24.58■■□□□ 1.53
PRKCA-203ENST00000578063 PXDNQ92626 1479 aa24.58■■□□□ 1.53
PRKCA-203ENST00000578063 FLT4P35916 1363 aa24.58■■□□□ 1.53
PRKCA-203ENST00000578063 NGEFQ8N5V2 710 aa24.58■■□□□ 1.52
PRKCA-203ENST00000578063 KCNH5Q8NCM2 988 aa24.58■■□□□ 1.52
PRKCA-203ENST00000578063 RUNDC1Q96C34 613 aa24.58■■□□□ 1.52
PRKCA-203ENST00000578063 ALS2Q96Q42 1657 aa24.58■■□□□ 1.52
PRKCA-203ENST00000578063 PEAK1Q9H792 1746 aa24.57■■□□□ 1.52
PRKCA-203ENST00000578063 SLIT3O75094 1523 aa24.57■■□□□ 1.52
PRKCA-203ENST00000578063 IL13P35225 146 aa24.56■■□□□ 1.52
PRKCA-203ENST00000578063 USP19O94966 1318 aa24.56■■□□□ 1.52
PRKCA-203ENST00000578063 NFAT5O94916 1531 aa24.56■■□□□ 1.52
PRKCA-203ENST00000578063 TNS3Q68CZ2 1445 aa24.55■■□□□ 1.52
PRKCA-203ENST00000578063 SENP3-EIF4A1A0A087X0R7 540 aa24.55■■□□□ 1.52
PRKCA-203ENST00000578063 PDE3BQ13370 1112 aa24.55■■□□□ 1.52
PRKCA-203ENST00000578063 PNNQ9H307 717 aaKnown RBP24.55■■□□□ 1.52
PRKCA-203ENST00000578063 RTL1A6NKG5 1358 aa24.54■■□□□ 1.52
PRKCA-203ENST00000578063 IQSEC2Q5JU85 1478 aa24.54■■□□□ 1.52
PRKCA-203ENST00000578063 APAF1O14727 1248 aa24.53■■□□□ 1.52
PRKCA-203ENST00000578063 LMOD2Q6P5Q4 547 aa24.53■■□□□ 1.52
PRKCA-203ENST00000578063 AMPHP49418 695 aa24.52■■□□□ 1.52
PRKCA-203ENST00000578063 DDX17Q92841 729 aaKnown RBP24.52■■□□□ 1.52
PRKCA-203ENST00000578063 SALL2Q9Y467 1007 aaPredicted RBP24.52■■□□□ 1.52
PRKCA-203ENST00000578063 FCHSD2O94868 740 aa24.51■■□□□ 1.51
PRKCA-203ENST00000578063 ARHGEF10O15013 1369 aa24.51■■□□□ 1.51
PRKCA-203ENST00000578063 EIF4A2Q14240 407 aaKnown RBP24.5■■□□□ 1.51
PRKCA-203ENST00000578063 SPATA31A3Q5VYP0 1347 aa24.5■■□□□ 1.51
PRKCA-203ENST00000578063 HSP90AB2PQ58FF8 381 aa24.49■■□□□ 1.51
PRKCA-203ENST00000578063 SOS2Q07890 1332 aaPredicted RBP24.49■■□□□ 1.51
PRKCA-203ENST00000578063 NCBP3Q53F19 620 aaKnown RBP24.49■■□□□ 1.51
PRKCA-203ENST00000578063 PLEKHF1Q96S99 279 aa24.49■■□□□ 1.51
PRKCA-203ENST00000578063 PHRF1Q9P1Y6 1649 aaKnown RBP24.48■■□□□ 1.51
PRKCA-203ENST00000578063 MAPK8IP3Q9UPT6 1336 aa24.48■■□□□ 1.51
PRKCA-203ENST00000578063 GCP02774 474 aa24.48■■□□□ 1.51
PRKCA-203ENST00000578063 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms