RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
DDX42-204ENST00000577940 SLIT2O94813 1529 aa11.94□□□□□ -0.5
DDX42-204ENST00000577940 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
DDX42-204ENST00000577940 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
DDX42-204ENST00000577940 CENPJQ9HC77 1338 aaPredicted RBP11.93□□□□□ -0.5
DDX42-204ENST00000577940 TULP4Q9NRJ4 1543 aa11.93□□□□□ -0.5
DDX42-204ENST00000577940 ONECUT3O60422 494 aaPredicted RBP11.93□□□□□ -0.5
DDX42-204ENST00000577940 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
DDX42-204ENST00000577940 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
DDX42-204ENST00000577940 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
DDX42-204ENST00000577940 ADGRB2O60241 1585 aa11.92□□□□□ -0.5
DDX42-204ENST00000577940 DSG3P32926 999 aa11.92□□□□□ -0.5
DDX42-204ENST00000577940 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
DDX42-204ENST00000577940 BTG4Q9NY30 223 aa11.92□□□□□ -0.5
DDX42-204ENST00000577940 RALGAPBQ86X10 1494 aa11.91□□□□□ -0.5
DDX42-204ENST00000577940 PRDM11Q9NQV5 511 aa11.91□□□□□ -0.5
DDX42-204ENST00000577940 ACEP12821 1306 aa11.91□□□□□ -0.5
DDX42-204ENST00000577940 A0A0G2JS52 829 aa11.89□□□□□ -0.51
DDX42-204ENST00000577940 MYT1Q01538 1121 aa11.89□□□□□ -0.51
DDX42-204ENST00000577940 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
DDX42-204ENST00000577940 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
DDX42-204ENST00000577940 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
DDX42-204ENST00000577940 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
DDX42-204ENST00000577940 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
DDX42-204ENST00000577940 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
DDX42-204ENST00000577940 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
DDX42-204ENST00000577940 EVC2Q86UK5 1308 aa11.87□□□□□ -0.51
DDX42-204ENST00000577940 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
DDX42-204ENST00000577940 ATP7BP35670 1465 aa11.87□□□□□ -0.51
DDX42-204ENST00000577940 ROCK2O75116 1388 aaKnown RBP11.86□□□□□ -0.51
DDX42-204ENST00000577940 CAPN15O75808 1086 aa11.86□□□□□ -0.51
DDX42-204ENST00000577940 EVA1CP58658 441 aa11.86□□□□□ -0.51
DDX42-204ENST00000577940 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
DDX42-204ENST00000577940 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
DDX42-204ENST00000577940 USP32Q8NFA0 1604 aa11.86□□□□□ -0.51
DDX42-204ENST00000577940 CABP1Q9NZU7 370 aa11.86□□□□□ -0.51
DDX42-204ENST00000577940 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
DDX42-204ENST00000577940 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
DDX42-204ENST00000577940 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
DDX42-204ENST00000577940 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
DDX42-204ENST00000577940 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
DDX42-204ENST00000577940 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
DDX42-204ENST00000577940 BLMP54132 1417 aaPredicted RBP11.84□□□□□ -0.51
DDX42-204ENST00000577940 PPIP5K1Q6PFW1 1433 aa11.84□□□□□ -0.51
DDX42-204ENST00000577940 CHRNA2Q15822 529 aa11.84□□□□□ -0.51
DDX42-204ENST00000577940 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
DDX42-204ENST00000577940 GCP02774 474 aa11.83□□□□□ -0.52
DDX42-204ENST00000577940 STRN4Q9NRL3 753 aa11.83□□□□□ -0.52
DDX42-204ENST00000577940 NLRP6P59044 892 aa11.82□□□□□ -0.52
DDX42-204ENST00000577940 USP19O94966 1318 aa11.81□□□□□ -0.52
DDX42-204ENST00000577940 SPATA31A1Q5TZJ5 1347 aa11.81□□□□□ -0.52
DDX42-204ENST00000577940 KIAA1210Q9ULL0 1709 aa11.81□□□□□ -0.52
DDX42-204ENST00000577940 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
DDX42-204ENST00000577940 GLI3P10071 1580 aa11.81□□□□□ -0.52
DDX42-204ENST00000577940 CPDO75976 1380 aa11.81□□□□□ -0.52
DDX42-204ENST00000577940 BAG6P46379 1132 aa11.8□□□□□ -0.52
DDX42-204ENST00000577940 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
DDX42-204ENST00000577940 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
DDX42-204ENST00000577940 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
DDX42-204ENST00000577940 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
DDX42-204ENST00000577940 TCP11L2Q8N4U5 519 aa11.79□□□□□ -0.52
DDX42-204ENST00000577940 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.79□□□□□ -0.52
DDX42-204ENST00000577940 ARHGEF28Q8N1W1 1705 aaKnown RBP11.78□□□□□ -0.52
DDX42-204ENST00000577940 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
DDX42-204ENST00000577940 PDE3BQ13370 1112 aa11.78□□□□□ -0.52
DDX42-204ENST00000577940 DEFB132Q7Z7B7 95 aa11.78□□□□□ -0.52
DDX42-204ENST00000577940 KCNH5Q8NCM2 988 aa11.78□□□□□ -0.52
DDX42-204ENST00000577940 USP35Q9P2H5 1018 aa11.78□□□□□ -0.52
DDX42-204ENST00000577940 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
DDX42-204ENST00000577940 RGPD8O14715 1765 aaPredicted RBP11.78□□□□□ -0.52
DDX42-204ENST00000577940 TRPM3Q9HCF6 1732 aaPredicted RBP11.78□□□□□ -0.52
DDX42-204ENST00000577940 MARF1Q9Y4F3 1742 aaKnown RBP11.78□□□□□ -0.52
DDX42-204ENST00000577940 USP6P35125 1406 aa11.78□□□□□ -0.52
DDX42-204ENST00000577940 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.52
DDX42-204ENST00000577940 TTC21BQ7Z4L5 1316 aa11.77□□□□□ -0.53
DDX42-204ENST00000577940 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.53
DDX42-204ENST00000577940 ZBTB7CA1YPR0 619 aa11.77□□□□□ -0.53
DDX42-204ENST00000577940 C11orf95C9JLR9 678 aaPredicted RBP11.77□□□□□ -0.53
DDX42-204ENST00000577940 NWD2Q9ULI1 1742 aa11.77□□□□□ -0.53
DDX42-204ENST00000577940 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
DDX42-204ENST00000577940 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
DDX42-204ENST00000577940 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
DDX42-204ENST00000577940 AATKQ6ZMQ8 1374 aa11.75□□□□□ -0.53
DDX42-204ENST00000577940 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
DDX42-204ENST00000577940 TMC1Q8TDI8 760 aa11.75□□□□□ -0.53
DDX42-204ENST00000577940 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
DDX42-204ENST00000577940 SBNO2Q9Y2G9 1366 aa11.74□□□□□ -0.53
DDX42-204ENST00000577940 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
DDX42-204ENST00000577940 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
DDX42-204ENST00000577940 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
DDX42-204ENST00000577940 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
DDX42-204ENST00000577940 EN1Q05925 392 aaPredicted RBP11.73□□□□□ -0.53
DDX42-204ENST00000577940 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
DDX42-204ENST00000577940 ARHGEF25Q86VW2 580 aa11.73□□□□□ -0.53
DDX42-204ENST00000577940 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
DDX42-204ENST00000577940 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
DDX42-204ENST00000577940 TRIM37O94972 964 aa11.72□□□□□ -0.53
DDX42-204ENST00000577940 CDCA7Q9BWT1 371 aaPredicted RBP11.72□□□□□ -0.53
DDX42-204ENST00000577940 APBA3O96018 575 aa11.71□□□□□ -0.53
DDX42-204ENST00000577940 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms