RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 POLR3AO14802 1390 aaPredicted RBP14.52□□□□□ -0.08
SUPT6H-204ENST00000577939 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.08
SUPT6H-204ENST00000577939 EP400Q96L91 3159 aa14.52□□□□□ -0.08
SUPT6H-204ENST00000577939 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.09
SUPT6H-204ENST00000577939 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
SUPT6H-204ENST00000577939 AKAP12Q02952 1782 aa14.52□□□□□ -0.09
SUPT6H-204ENST00000577939 BRD4O60885 1362 aaPredicted RBP14.51□□□□□ -0.09
SUPT6H-204ENST00000577939 EVC2Q86UK5 1308 aa14.51□□□□□ -0.09
SUPT6H-204ENST00000577939 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
SUPT6H-204ENST00000577939 UNC5CLQ8IV45 518 aa14.5□□□□□ -0.09
SUPT6H-204ENST00000577939 GLI3P10071 1580 aa14.5□□□□□ -0.09
SUPT6H-204ENST00000577939 NRKQ7Z2Y5 1582 aa14.49□□□□□ -0.09
SUPT6H-204ENST00000577939 BRWD3Q6RI45 1802 aa14.48□□□□□ -0.09
SUPT6H-204ENST00000577939 SBNO2Q9Y2G9 1366 aa14.47□□□□□ -0.09
SUPT6H-204ENST00000577939 ACEP12821 1306 aa14.47□□□□□ -0.09
SUPT6H-204ENST00000577939 PLEKHG3A1L390 1219 aa14.47□□□□□ -0.09
SUPT6H-204ENST00000577939 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
SUPT6H-204ENST00000577939 MON2Q7Z3U7 1717 aa14.46□□□□□ -0.09
SUPT6H-204ENST00000577939 CABLES1Q8TDN4 633 aa14.46□□□□□ -0.09
SUPT6H-204ENST00000577939 GJD4Q96KN9 370 aaPredicted RBP14.46□□□□□ -0.09
SUPT6H-204ENST00000577939 CCDC9Q9Y3X0 531 aaKnown RBP14.45□□□□□ -0.1
SUPT6H-204ENST00000577939 USP6P35125 1406 aa14.44□□□□□ -0.1
SUPT6H-204ENST00000577939 VPS72Q15906 364 aa14.44□□□□□ -0.1
SUPT6H-204ENST00000577939 UPF1Q92900 1129 aaKnown RBP eCLIP14.44□□□□□ -0.1
SUPT6H-204ENST00000577939 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
SUPT6H-204ENST00000577939 PRDM11Q9NQV5 511 aa14.44□□□□□ -0.1
SUPT6H-204ENST00000577939 PIK3C2AO00443 1686 aa14.44□□□□□ -0.1
SUPT6H-204ENST00000577939 NBPF8Q3BBV2 869 aa14.43□□□□□ -0.1
SUPT6H-204ENST00000577939 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
SUPT6H-204ENST00000577939 ABTB2Q8N961 1025 aa14.41□□□□□ -0.1
SUPT6H-204ENST00000577939 USP54Q70EL1 1684 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 LMO7Q8WWI1 1683 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 KIAA0232Q92628 1395 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 A0A0G2JS52 829 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 MYT1Q01538 1121 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 NLRP13Q86W25 1043 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 BTG4Q9NY30 223 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 SLIT3O75094 1523 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 USP19O94966 1318 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 CLSPNQ9HAW4 1339 aa14.4□□□□□ -0.1
SUPT6H-204ENST00000577939 THSD7AQ9UPZ6 1657 aa14.39□□□□□ -0.11
SUPT6H-204ENST00000577939 CPDO75976 1380 aa14.39□□□□□ -0.11
SUPT6H-204ENST00000577939 RGPD1P0DJD0 1748 aa14.39□□□□□ -0.11
SUPT6H-204ENST00000577939 FAM83GA6ND36 823 aa14.38□□□□□ -0.11
SUPT6H-204ENST00000577939 ABCC6O95255 1503 aa14.37□□□□□ -0.11
SUPT6H-204ENST00000577939 WNK3Q9BYP7 1800 aa14.37□□□□□ -0.11
SUPT6H-204ENST00000577939 CCDC125Q86Z20 511 aa14.37□□□□□ -0.11
SUPT6H-204ENST00000577939 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
SUPT6H-204ENST00000577939 CABP1Q9NZU7 370 aa14.37□□□□□ -0.11
SUPT6H-204ENST00000577939 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
SUPT6H-204ENST00000577939 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
SUPT6H-204ENST00000577939 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
SUPT6H-204ENST00000577939 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
SUPT6H-204ENST00000577939 LTN1O94822 1766 aa14.35□□□□□ -0.11
SUPT6H-204ENST00000577939 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
SUPT6H-204ENST00000577939 SEPT12Q8IYM1 358 aa14.35□□□□□ -0.11
SUPT6H-204ENST00000577939 SSH2Q76I76 1423 aa14.34□□□□□ -0.11
SUPT6H-204ENST00000577939 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
SUPT6H-204ENST00000577939 SF3B2Q13435 895 aaKnown RBP14.34□□□□□ -0.11
SUPT6H-204ENST00000577939 PARP4Q9UKK3 1724 aaKnown RBP14.34□□□□□ -0.11
SUPT6H-204ENST00000577939 SPATA31A5Q5VU36 1347 aa14.34□□□□□ -0.11
SUPT6H-204ENST00000577939 SPATA31A7Q8IWB4 1347 aa14.34□□□□□ -0.11
SUPT6H-204ENST00000577939 CPSF1Q10570 1443 aaKnown RBP14.33□□□□□ -0.11
SUPT6H-204ENST00000577939 NLRP6P59044 892 aa14.33□□□□□ -0.12
SUPT6H-204ENST00000577939 KRT27Q7Z3Y8 459 aa14.33□□□□□ -0.12
SUPT6H-204ENST00000577939 HDGFL2Q7Z4V5 671 aaPredicted RBP14.33□□□□□ -0.12
SUPT6H-204ENST00000577939 TIMELESSQ9UNS1 1208 aa14.33□□□□□ -0.12
SUPT6H-204ENST00000577939 COL5A2P05997 1499 aaPredicted RBP14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 RGPD5Q99666 1765 aa14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 EVA1CP58658 441 aa14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 CHRNA2Q15822 529 aa14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 KCNH5Q8NCM2 988 aa14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 STRN4Q9NRL3 753 aa14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
SUPT6H-204ENST00000577939 ONECUT3O60422 494 aaPredicted RBP14.31□□□□□ -0.12
SUPT6H-204ENST00000577939 GCP02774 474 aa14.31□□□□□ -0.12
SUPT6H-204ENST00000577939 PUS7Q96PZ0 661 aaKnown RBP14.31□□□□□ -0.12
SUPT6H-204ENST00000577939 TERF2IPQ9NYB0 399 aa14.31□□□□□ -0.12
SUPT6H-204ENST00000577939 TTC21BQ7Z4L5 1316 aa14.31□□□□□ -0.12
SUPT6H-204ENST00000577939 COL18A1P39060 1754 aa14.31□□□□□ -0.12
SUPT6H-204ENST00000577939 USP47Q96K76 1375 aa14.31□□□□□ -0.12
SUPT6H-204ENST00000577939 FAM208AQ9UK61 1670 aaKnown RBP14.3□□□□□ -0.12
SUPT6H-204ENST00000577939 KIF20BQ96Q89 1820 aa14.3□□□□□ -0.12
SUPT6H-204ENST00000577939 TMC1Q8TDI8 760 aa14.3□□□□□ -0.12
SUPT6H-204ENST00000577939 SPATA31A1Q5TZJ5 1347 aa14.3□□□□□ -0.12
SUPT6H-204ENST00000577939 AATKQ6ZMQ8 1374 aa14.3□□□□□ -0.12
SUPT6H-204ENST00000577939 NFAT5O94916 1531 aa14.3□□□□□ -0.12
SUPT6H-204ENST00000577939 TNS1Q9HBL0 1735 aaKnown RBP14.29□□□□□ -0.12
SUPT6H-204ENST00000577939 CRB1P82279 1406 aa14.29□□□□□ -0.12
SUPT6H-204ENST00000577939 ZBTB7CA1YPR0 619 aa14.28□□□□□ -0.12
SUPT6H-204ENST00000577939 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
SUPT6H-204ENST00000577939 CD163L1Q9NR16 1453 aa14.28□□□□□ -0.12
SUPT6H-204ENST00000577939 LRRC37A3O60309 1634 aa14.27□□□□□ -0.12
SUPT6H-204ENST00000577939 A0A1W2PP64 1363 aa14.27□□□□□ -0.12
SUPT6H-204ENST00000577939 CDCA8Q53HL2 280 aa14.27□□□□□ -0.13
SUPT6H-204ENST00000577939 THRAP3Q9Y2W1 955 aaKnown RBP14.27□□□□□ -0.13
SUPT6H-204ENST00000577939 ST20-MTHFSA0A0A6YYL1 179 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms