RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, humanhuman

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-204ENST00000577549 USP17L20D6RJB6 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 SKIP12755 728 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 USP17L24Q0WX57 530 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 FUT2Q10981 343 aa6.64□□□□□ -1.35
DHX40-204ENST00000577549 MKRN1Q9UHC7 482 aaKnown RBP6.64□□□□□ -1.35
DHX40-204ENST00000577549 EIF4G2P78344 907 aaKnown RBP eCLIP6.63□□□□□ -1.35
DHX40-204ENST00000577549 KCNH2Q12809 1159 aa6.63□□□□□ -1.35
DHX40-204ENST00000577549 PTK7Q13308 1070 aa6.63□□□□□ -1.35
DHX40-204ENST00000577549 C8orf37Q96NL8 207 aa6.63□□□□□ -1.35
DHX40-204ENST00000577549 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
DHX40-204ENST00000577549 ANO2Q9NQ90 1003 aa6.63□□□□□ -1.35
DHX40-204ENST00000577549 PPP1R1BQ9UD71 204 aaPredicted RBP6.63□□□□□ -1.35
DHX40-204ENST00000577549 USP46P62068 366 aa6.63□□□□□ -1.35
DHX40-204ENST00000577549 C7P10643 843 aa6.63□□□□□ -1.35
DHX40-204ENST00000577549 LGR5O75473 907 aa6.62□□□□□ -1.35
DHX40-204ENST00000577549 NCOA4Q13772 614 aa6.62□□□□□ -1.35
DHX40-204ENST00000577549 DRC1Q96MC2 740 aa6.62□□□□□ -1.35
DHX40-204ENST00000577549 TRIM6-TRIM34B2RNG4 842 aa6.62□□□□□ -1.35
DHX40-204ENST00000577549 NBPF26B4DH59 902 aa6.62□□□□□ -1.35
DHX40-204ENST00000577549 RASA1P20936 1047 aa6.62□□□□□ -1.35
DHX40-204ENST00000577549 SREK1Q8WXA9 508 aaKnown RBP6.62□□□□□ -1.35
DHX40-204ENST00000577549 FAM196BA6NMK8 535 aa6.61□□□□□ -1.35
DHX40-204ENST00000577549 RECKO95980 971 aa6.61□□□□□ -1.35
DHX40-204ENST00000577549 ATP2B4P23634 1241 aa6.61□□□□□ -1.35
DHX40-204ENST00000577549 ZNF211Q13398 564 aaPredicted RBP6.61□□□□□ -1.35
DHX40-204ENST00000577549 VAMP1P23763 118 aa6.6□□□□□ -1.35
DHX40-204ENST00000577549 NR1H3Q13133 447 aa6.6□□□□□ -1.35
DHX40-204ENST00000577549 ZNF594Q96JF6 807 aaPredicted RBP6.6□□□□□ -1.35
DHX40-204ENST00000577549 LHX6Q9UPM6 363 aa6.6□□□□□ -1.35
DHX40-204ENST00000577549 TSGA10IPQ3SY00 556 aa6.6□□□□□ -1.35
DHX40-204ENST00000577549 SWT1Q5T5J6 900 aaKnown RBP6.6□□□□□ -1.35
DHX40-204ENST00000577549 CLP1Q92989 425 aaKnown RBP6.6□□□□□ -1.35
DHX40-204ENST00000577549 PPM1GO15355 546 aaPredicted RBP6.59□□□□□ -1.35
DHX40-204ENST00000577549 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
DHX40-204ENST00000577549 PLEKHM2Q8IWE5 1019 aa6.59□□□□□ -1.35
DHX40-204ENST00000577549 NFATC2IPQ8NCF5 419 aa6.59□□□□□ -1.35
DHX40-204ENST00000577549 FAM200AQ8TCP9 573 aa6.59□□□□□ -1.35
DHX40-204ENST00000577549 ABL1P00519 1130 aa6.59□□□□□ -1.35
DHX40-204ENST00000577549 CLDN10P78369 228 aa6.59□□□□□ -1.35
DHX40-204ENST00000577549 DPYDQ12882 1025 aa6.59□□□□□ -1.35
DHX40-204ENST00000577549 PPP1R3GB7ZBB8 358 aa6.58□□□□□ -1.36
DHX40-204ENST00000577549 PRMT3O60678 531 aa6.58□□□□□ -1.36
DHX40-204ENST00000577549 MTMR3Q13615 1198 aa6.58□□□□□ -1.36
DHX40-204ENST00000577549 C9orf131Q5VYM1 1079 aa6.58□□□□□ -1.36
DHX40-204ENST00000577549 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
DHX40-204ENST00000577549 BCL2L12Q9HB09 334 aa6.58□□□□□ -1.36
DHX40-204ENST00000577549 PACS2Q86VP3 889 aa6.58□□□□□ -1.36
DHX40-204ENST00000577549 ZBBXA8MT70 800 aa6.57□□□□□ -1.36
DHX40-204ENST00000577549 EIF5BO60841 1220 aaKnown RBP6.57□□□□□ -1.36
DHX40-204ENST00000577549 TSNAXIP1Q2TAA8 658 aa6.57□□□□□ -1.36
DHX40-204ENST00000577549 H3BRB1 525 aa6.57□□□□□ -1.36
DHX40-204ENST00000577549 ZC3H6P61129 1189 aaKnown RBP6.57□□□□□ -1.36
DHX40-204ENST00000577549 GPR153Q6NV75 609 aa6.57□□□□□ -1.36
DHX40-204ENST00000577549 CAPN12Q6ZSI9 719 aa6.57□□□□□ -1.36
DHX40-204ENST00000577549 ANKMY2Q8IV38 441 aa6.57□□□□□ -1.36
DHX40-204ENST00000577549 TUT1Q9H6E5 874 aaKnown RBP6.57□□□□□ -1.36
DHX40-204ENST00000577549 ARHGEF11O15085 1522 aa6.57□□□□□ -1.36
DHX40-204ENST00000577549 NAALADL2Q58DX5 795 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 PNMA1Q8ND90 353 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 PRIMPOLQ96LW4 560 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 KIAA1024Q9UPX6 916 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 HAX1O00165 279 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 ECM1Q16610 540 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 PUS10Q3MIT2 529 aaKnown RBP6.56□□□□□ -1.36
DHX40-204ENST00000577549 LARP1Q6PKG0 1096 aaKnown RBP6.56□□□□□ -1.36
DHX40-204ENST00000577549 OGFOD1Q8N543 542 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 GAS2L2Q8NHY3 880 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 SEPT9Q9UHD8 586 aaPredicted RBP6.56□□□□□ -1.36
DHX40-204ENST00000577549 LAMC3Q9Y6N6 1575 aa6.56□□□□□ -1.36
DHX40-204ENST00000577549 KIAA1468Q9P260 1216 aa6.55□□□□□ -1.36
DHX40-204ENST00000577549 MAP10Q9P2G4 905 aa6.55□□□□□ -1.36
DHX40-204ENST00000577549 HOXB3P14651 431 aaPredicted RBP6.55□□□□□ -1.36
DHX40-204ENST00000577549 PTPREP23469 700 aa6.55□□□□□ -1.36
DHX40-204ENST00000577549 RSF1Q96T23 1441 aaPredicted RBP6.55□□□□□ -1.36
DHX40-204ENST00000577549 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
DHX40-204ENST00000577549 OCSTAMPQ9BR26 566 aa6.54□□□□□ -1.36
DHX40-204ENST00000577549 BACH2Q9BYV9 841 aa6.54□□□□□ -1.36
DHX40-204ENST00000577549 CEP126Q9P2H0 1117 aa6.54□□□□□ -1.36
DHX40-204ENST00000577549 METRNQ9UJH8 293 aa6.54□□□□□ -1.36
DHX40-204ENST00000577549 OCLNQ16625 522 aa6.54□□□□□ -1.36
DHX40-204ENST00000577549 CDCA7Q9BWT1 371 aaPredicted RBP6.54□□□□□ -1.36
DHX40-204ENST00000577549 FKBPLQ9UIM3 349 aa6.54□□□□□ -1.36
DHX40-204ENST00000577549 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
DHX40-204ENST00000577549 DKK1O94907 266 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 PLPP7Q8NBV4 271 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 SEPT3Q9UH03 358 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 WDR62O43379 1518 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 CFHP08603 1231 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 MAPK1P28482 360 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 GIMAP6Q6P9H5 292 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 PHTF2Q8N3S3 785 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 UBXN4Q92575 508 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.53□□□□□ -1.36
DHX40-204ENST00000577549 PPP4R3BQ5MIZ7 849 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 LYPD8Q6UX82 237 aa6.53□□□□□ -1.36
DHX40-204ENST00000577549 CANXP27824 592 aaKnown RBP6.52□□□□□ -1.37
DHX40-204ENST00000577549 RNF19BQ6ZMZ0 732 aa6.52□□□□□ -1.37
DHX40-204ENST00000577549 RETREG3Q86VR2 466 aa6.52□□□□□ -1.37
DHX40-204ENST00000577549 C1orf216Q8TAB5 229 aa6.52□□□□□ -1.37
DHX40-204ENST00000577549 MKNK1Q9BUB5 465 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms