RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 ROCK2O75116 1388 aaKnown RBP10.53□□□□□ -0.72
CDH8-203ENST00000577390 C9orf78Q9NZ63 289 aaPredicted RBP10.52□□□□□ -0.72
CDH8-203ENST00000577390 GOLGA6L10A0A0M3HER8 536 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 PDILTQ8N807 584 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 PRIMPOLQ96LW4 560 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 PRDM2Q13029 1718 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 DCAF11Q8TEB1 546 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 CENPHQ9H3R5 247 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 SPATA24Q86W54 205 aa10.52□□□□□ -0.73
CDH8-203ENST00000577390 EIF3AQ14152 1382 aaKnown RBP10.51□□□□□ -0.73
CDH8-203ENST00000577390 INCENPQ9NQS7 918 aa10.51□□□□□ -0.73
CDH8-203ENST00000577390 USP8P40818 1118 aa10.51□□□□□ -0.73
CDH8-203ENST00000577390 ZNHIT6Q9NWK9 470 aaKnown RBP10.51□□□□□ -0.73
CDH8-203ENST00000577390 ABCC8Q09428 1581 aa10.51□□□□□ -0.73
CDH8-203ENST00000577390 MCM4P33991 863 aa10.5□□□□□ -0.73
CDH8-203ENST00000577390 PMFBP1Q8TBY8 1022 aa10.5□□□□□ -0.73
CDH8-203ENST00000577390 GOLGA6L7A0A1B0GV03 622 aa10.5□□□□□ -0.73
CDH8-203ENST00000577390 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
CDH8-203ENST00000577390 ARL1P40616 181 aaPredicted RBP10.5□□□□□ -0.73
CDH8-203ENST00000577390 PRKRIP1Q9H875 184 aaPredicted RBP10.5□□□□□ -0.73
CDH8-203ENST00000577390 VTI1AQ96AJ9 217 aa10.5□□□□□ -0.73
CDH8-203ENST00000577390 XBP1P17861 261 aa10.5□□□□□ -0.73
CDH8-203ENST00000577390 BIRC2Q13490 618 aa10.49□□□□□ -0.73
CDH8-203ENST00000577390 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
CDH8-203ENST00000577390 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
CDH8-203ENST00000577390 RALBP1Q15311 655 aa10.49□□□□□ -0.73
CDH8-203ENST00000577390 KIF21BO75037 1637 aa10.49□□□□□ -0.73
CDH8-203ENST00000577390 SMC1AQ14683 1233 aaKnown RBP10.49□□□□□ -0.73
CDH8-203ENST00000577390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDH8-203ENST00000577390 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
CDH8-203ENST00000577390 CFAP57Q96MR6 1250 aa10.49□□□□□ -0.73
CDH8-203ENST00000577390 ATP6V1DQ9Y5K8 247 aa10.49□□□□□ -0.73
CDH8-203ENST00000577390 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
CDH8-203ENST00000577390 TMF1P82094 1093 aa10.48□□□□□ -0.73
CDH8-203ENST00000577390 BICD2Q8TD16 824 aa10.48□□□□□ -0.73
CDH8-203ENST00000577390 ZSCAN29Q8IWY8 852 aaPredicted RBP10.48□□□□□ -0.73
CDH8-203ENST00000577390 EIF3JO75822 258 aaKnown RBP10.48□□□□□ -0.73
CDH8-203ENST00000577390 MAGEC2Q9UBF1 373 aaPredicted RBP10.48□□□□□ -0.73
CDH8-203ENST00000577390 CFDP1Q9UEE9 299 aaPredicted RBP10.48□□□□□ -0.73
CDH8-203ENST00000577390 NINLQ9Y2I6 1382 aa10.48□□□□□ -0.73
CDH8-203ENST00000577390 HSPA5P11021 654 aaKnown RBP10.48□□□□□ -0.73
CDH8-203ENST00000577390 ERC1Q8IUD2 1116 aa10.48□□□□□ -0.73
CDH8-203ENST00000577390 LEKR1Q6ZMV7 388 aa10.48□□□□□ -0.73
CDH8-203ENST00000577390 SEPT10Q9P0V9 454 aa10.48□□□□□ -0.73
CDH8-203ENST00000577390 CCDC91Q7Z6B0 441 aa10.48□□□□□ -0.73
CDH8-203ENST00000577390 EIF2S2P20042 333 aaKnown RBP10.47□□□□□ -0.73
CDH8-203ENST00000577390 SEPT6Q14141 434 aa10.47□□□□□ -0.73
CDH8-203ENST00000577390 MYCBPQ99417 103 aaPredicted RBP10.47□□□□□ -0.73
CDH8-203ENST00000577390 SH3BP5O60239 455 aa10.47□□□□□ -0.73
CDH8-203ENST00000577390 RWDD1Q9H446 243 aaPredicted RBP10.47□□□□□ -0.73
CDH8-203ENST00000577390 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDH8-203ENST00000577390 DZIP1Q86YF9 867 aaKnown RBP10.47□□□□□ -0.73
CDH8-203ENST00000577390 XPCQ01831 940 aaPredicted RBP10.47□□□□□ -0.73
CDH8-203ENST00000577390 TEFQ10587 303 aa10.47□□□□□ -0.73
CDH8-203ENST00000577390 OLFM4Q6UX06 510 aa10.47□□□□□ -0.73
CDH8-203ENST00000577390 GPATCH11Q8N954 259 aa10.47□□□□□ -0.73
CDH8-203ENST00000577390 ZNF354CQ86Y25 554 aa10.46□□□□□ -0.73
CDH8-203ENST00000577390 SLU7O95391 586 aaKnown RBP10.46□□□□□ -0.73
CDH8-203ENST00000577390 CT47B1P0C2W7 299 aaPredicted RBP10.46□□□□□ -0.74
CDH8-203ENST00000577390 ANO2Q9NQ90 1003 aa10.46□□□□□ -0.74
CDH8-203ENST00000577390 GABPB1Q06547 395 aaPredicted RBP10.46□□□□□ -0.74
CDH8-203ENST00000577390 RBM28Q9NW13 759 aaKnown RBP10.46□□□□□ -0.74
CDH8-203ENST00000577390 SLC3A2P08195 630 aaKnown RBP10.46□□□□□ -0.74
CDH8-203ENST00000577390 RALYLQ86SE5 291 aaKnown RBP10.46□□□□□ -0.74
CDH8-203ENST00000577390 KIF15Q9NS87 1388 aa10.46□□□□□ -0.74
CDH8-203ENST00000577390 TDO2P48775 406 aa10.45□□□□□ -0.74
CDH8-203ENST00000577390 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
CDH8-203ENST00000577390 SERPINA10Q9UK55 444 aa10.45□□□□□ -0.74
CDH8-203ENST00000577390 TANGO6Q9C0B7 1094 aa10.45□□□□□ -0.74
CDH8-203ENST00000577390 PANK2Q9BZ23 570 aa10.45□□□□□ -0.74
CDH8-203ENST00000577390 ARHGAP35Q9NRY4 1499 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 TXLNAP40222 546 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 PPP4R3AQ6IN85 833 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 KRT222Q8N1A0 295 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 EPB41L2O43491 1005 aaKnown RBP10.44□□□□□ -0.74
CDH8-203ENST00000577390 RAB3IL1Q8TBN0 382 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 WASHC4Q2M389 1173 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
CDH8-203ENST00000577390 CGNL1Q0VF96 1302 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 SLC26A8Q96RN1 970 aa10.44□□□□□ -0.74
CDH8-203ENST00000577390 ZNF76P36508 570 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 CAVIN1Q6NZI2 390 aaKnown RBP10.43□□□□□ -0.74
CDH8-203ENST00000577390 CCDC146Q8IYE0 955 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 IFT57Q9NWB7 429 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 GON4LQ3T8J9 2241 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 BMS1Q14692 1282 aaKnown RBP10.43□□□□□ -0.74
CDH8-203ENST00000577390 PPP1R9BQ96SB3 815 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 PSME1Q06323 249 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 KCNA4P22459 653 aa10.43□□□□□ -0.74
CDH8-203ENST00000577390 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 IFIT2P09913 472 aaKnown RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 ZKSCAN1P17029 563 aaPredicted RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 TXLNBQ8N3L3 684 aa10.42□□□□□ -0.74
CDH8-203ENST00000577390 FERP16591 822 aa10.42□□□□□ -0.74
CDH8-203ENST00000577390 VGFO15240 615 aaPredicted RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 NEUROD6Q96NK8 337 aa10.42□□□□□ -0.74
CDH8-203ENST00000577390 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
CDH8-203ENST00000577390 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms