RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 NGDNQ8NEJ9 315 aaKnown RBP29.12■■■□□ 2.25
SLC12A4-217ENST00000576462 ALS2Q96Q42 1657 aa29.09■■■□□ 2.25
SLC12A4-217ENST00000576462 NRAPQ86VF7 1730 aa29.08■■■□□ 2.25
SLC12A4-217ENST00000576462 COL14A1Q05707 1796 aaKnown RBP29.05■■■□□ 2.24
SLC12A4-217ENST00000576462 STAC3Q96MF2 364 aa29.03■■■□□ 2.24
SLC12A4-217ENST00000576462 NUDT16Q96DE0 195 aaKnown RBP29.02■■■□□ 2.24
SLC12A4-217ENST00000576462 PRDM11Q9NQV5 511 aa29.02■■■□□ 2.24
SLC12A4-217ENST00000576462 FAM182BQ5T319 152 aa29■■■□□ 2.23
SLC12A4-217ENST00000576462 ARHGEF28Q8N1W1 1705 aaKnown RBP29■■■□□ 2.23
SLC12A4-217ENST00000576462 SPATA31A5Q5VU36 1347 aa28.99■■■□□ 2.23
SLC12A4-217ENST00000576462 SPATA31A7Q8IWB4 1347 aa28.99■■■□□ 2.23
SLC12A4-217ENST00000576462 BAG6P46379 1132 aa28.99■■■□□ 2.23
SLC12A4-217ENST00000576462 ATP7BP35670 1465 aa28.98■■■□□ 2.23
SLC12A4-217ENST00000576462 CDK19Q9BWU1 502 aa28.97■■■□□ 2.23
SLC12A4-217ENST00000576462 CRYBG1Q9Y4K1 1723 aa28.97■■■□□ 2.23
SLC12A4-217ENST00000576462 CHRNA2Q15822 529 aa28.96■■■□□ 2.23
SLC12A4-217ENST00000576462 NUTM2GQ5VZR2 741 aa28.96■■■□□ 2.23
SLC12A4-217ENST00000576462 ITSN1Q15811 1721 aa28.95■■■□□ 2.23
SLC12A4-217ENST00000576462 PSDA5PKW4 1024 aaPredicted RBP28.95■■■□□ 2.22
SLC12A4-217ENST00000576462 KIAA0232Q92628 1395 aa28.95■■■□□ 2.22
SLC12A4-217ENST00000576462 HRCP23327 699 aa28.94■■■□□ 2.22
SLC12A4-217ENST00000576462 STRN4Q9NRL3 753 aa28.94■■■□□ 2.22
SLC12A4-217ENST00000576462 EN1Q05925 392 aaPredicted RBP28.93■■■□□ 2.22
SLC12A4-217ENST00000576462 ZC3H6P61129 1189 aaKnown RBP28.92■■■□□ 2.22
SLC12A4-217ENST00000576462 ACEP12821 1306 aa28.9■■■□□ 2.22
SLC12A4-217ENST00000576462 SPATA31A1Q5TZJ5 1347 aa28.89■■■□□ 2.21
SLC12A4-217ENST00000576462 PHRF1Q9P1Y6 1649 aaKnown RBP28.88■■■□□ 2.21
SLC12A4-217ENST00000576462 NBPF8Q3BBV2 869 aa28.88■■■□□ 2.21
SLC12A4-217ENST00000576462 THSD7AQ9UPZ6 1657 aa28.88■■■□□ 2.21
SLC12A4-217ENST00000576462 CCDC61Q9Y6R9 512 aa28.87■■■□□ 2.21
SLC12A4-217ENST00000576462 RGPD1P0DJD0 1748 aa28.86■■■□□ 2.21
SLC12A4-217ENST00000576462 USP35Q9P2H5 1018 aa28.86■■■□□ 2.21
SLC12A4-217ENST00000576462 POLR3AO14802 1390 aaPredicted RBP28.86■■■□□ 2.21
SLC12A4-217ENST00000576462 NBPF1Q3BBV0 1214 aa28.85■■■□□ 2.21
SLC12A4-217ENST00000576462 EVA1CP58658 441 aa28.84■■■□□ 2.21
SLC12A4-217ENST00000576462 ABTB2Q8N961 1025 aa28.83■■■□□ 2.21
SLC12A4-217ENST00000576462 TOPAZ1Q8N9V7 1692 aa28.83■■■□□ 2.21
SLC12A4-217ENST00000576462 PLEKHG3A1L390 1219 aa28.82■■■□□ 2.2
SLC12A4-217ENST00000576462 LRP5O75197 1615 aa28.82■■■□□ 2.2
SLC12A4-217ENST00000576462 TRIM37O94972 964 aa28.8■■■□□ 2.2
SLC12A4-217ENST00000576462 SRPK2P78362 688 aaKnown RBP28.8■■■□□ 2.2
SLC12A4-217ENST00000576462 R3HDM1Q15032 1099 aaKnown RBP28.8■■■□□ 2.2
SLC12A4-217ENST00000576462 EZH2Q15910 746 aaKnown RBP28.8■■■□□ 2.2
SLC12A4-217ENST00000576462 KIAA1210Q9ULL0 1709 aa28.79■■■□□ 2.2
SLC12A4-217ENST00000576462 FAM196AQ6ZSG2 479 aa28.78■■■□□ 2.2
SLC12A4-217ENST00000576462 SSH2Q76I76 1423 aa28.77■■■□□ 2.2
SLC12A4-217ENST00000576462 TNS1Q9HBL0 1735 aaKnown RBP28.77■■■□□ 2.2
SLC12A4-217ENST00000576462 NRKQ7Z2Y5 1582 aa28.76■■■□□ 2.19
SLC12A4-217ENST00000576462 LARP1Q6PKG0 1096 aaKnown RBP28.76■■■□□ 2.19
SLC12A4-217ENST00000576462 CABP2Q9NPB3 220 aa28.76■■■□□ 2.19
SLC12A4-217ENST00000576462 DISP2A7MBM2 1401 aa28.76■■■□□ 2.19
SLC12A4-217ENST00000576462 PDE3BQ13370 1112 aa28.75■■■□□ 2.19
SLC12A4-217ENST00000576462 PPIP5K1Q6PFW1 1433 aa28.75■■■□□ 2.19
SLC12A4-217ENST00000576462 CENPJQ9HC77 1338 aaPredicted RBP28.74■■■□□ 2.19
SLC12A4-217ENST00000576462 CAMTA1Q9Y6Y1 1673 aa28.74■■■□□ 2.19
SLC12A4-217ENST00000576462 APBA3O96018 575 aa28.73■■■□□ 2.19
SLC12A4-217ENST00000576462 BARGINQ6ZT62 677 aa28.73■■■□□ 2.19
SLC12A4-217ENST00000576462 USP19O94966 1318 aa28.72■■■□□ 2.19
SLC12A4-217ENST00000576462 NLRP13Q86W25 1043 aa28.72■■■□□ 2.19
SLC12A4-217ENST00000576462 CAMKK2Q96RR4 588 aa28.72■■■□□ 2.19
SLC12A4-217ENST00000576462 CPDO75976 1380 aa28.72■■■□□ 2.19
SLC12A4-217ENST00000576462 ZBTB7CA1YPR0 619 aa28.71■■■□□ 2.19
SLC12A4-217ENST00000576462 GCP02774 474 aa28.71■■■□□ 2.19
SLC12A4-217ENST00000576462 TCP11L2Q8N4U5 519 aa28.71■■■□□ 2.19
SLC12A4-217ENST00000576462 LMO7Q8WWI1 1683 aa28.67■■■□□ 2.18
SLC12A4-217ENST00000576462 CABP1Q9NZU7 370 aa28.67■■■□□ 2.18
SLC12A4-217ENST00000576462 QRICH2Q9H0J4 1663 aa28.64■■■□□ 2.18
SLC12A4-217ENST00000576462 NLRP6P59044 892 aa28.64■■■□□ 2.18
SLC12A4-217ENST00000576462 THRAP3Q9Y2W1 955 aaKnown RBP28.63■■■□□ 2.17
SLC12A4-217ENST00000576462 COL5A2P05997 1499 aaPredicted RBP28.63■■■□□ 2.17
SLC12A4-217ENST00000576462 PARD3Q8TEW0 1356 aa28.62■■■□□ 2.17
SLC12A4-217ENST00000576462 L3MBTL2Q969R5 705 aa28.61■■■□□ 2.17
SLC12A4-217ENST00000576462 USP6P35125 1406 aa28.6■■■□□ 2.17
SLC12A4-217ENST00000576462 BRD4O60885 1362 aaPredicted RBP28.6■■■□□ 2.17
SLC12A4-217ENST00000576462 CRB1P82279 1406 aa28.58■■■□□ 2.17
SLC12A4-217ENST00000576462 EVC2Q86UK5 1308 aa28.55■■■□□ 2.16
SLC12A4-217ENST00000576462 NBPF14Q5TI25 921 aa28.55■■■□□ 2.16
SLC12A4-217ENST00000576462 AATKQ6ZMQ8 1374 aa28.54■■■□□ 2.16
SLC12A4-217ENST00000576462 TOM1L2Q6ZVM7 507 aa28.54■■■□□ 2.16
SLC12A4-217ENST00000576462 SIN3AQ96ST3 1273 aa28.54■■■□□ 2.16
SLC12A4-217ENST00000576462 PARP4Q9UKK3 1724 aaKnown RBP28.54■■■□□ 2.16
SLC12A4-217ENST00000576462 RREB1Q92766 1687 aa28.54■■■□□ 2.16
SLC12A4-217ENST00000576462 SLIT3O75094 1523 aa28.53■■■□□ 2.16
SLC12A4-217ENST00000576462 NUP188Q5SRE5 1749 aa28.52■■■□□ 2.16
SLC12A4-217ENST00000576462 SOX12O15370 315 aa28.51■■■□□ 2.15
SLC12A4-217ENST00000576462 PIK3C2AO00443 1686 aa28.51■■■□□ 2.15
SLC12A4-217ENST00000576462 NEUROD1Q13562 356 aa28.5■■■□□ 2.15
SLC12A4-217ENST00000576462 DDB1Q16531 1140 aa28.5■■■□□ 2.15
SLC12A4-217ENST00000576462 AXIN2Q9Y2T1 843 aa28.49■■■□□ 2.15
SLC12A4-217ENST00000576462 OVOS2A0A0G2JMS6 1433 aa28.49■■■□□ 2.15
SLC12A4-217ENST00000576462 OVOS2A0A0J9YW53 1432 aa28.49■■■□□ 2.15
SLC12A4-217ENST00000576462 OVOS2Q6IE36 1432 aa28.49■■■□□ 2.15
SLC12A4-217ENST00000576462 ROCK2O75116 1388 aaKnown RBP28.48■■■□□ 2.15
SLC12A4-217ENST00000576462 TRPM1Q7Z4N2 1603 aa28.47■■■□□ 2.15
SLC12A4-217ENST00000576462 C11orf95C9JLR9 678 aaPredicted RBP28.47■■■□□ 2.15
SLC12A4-217ENST00000576462 TTC21BQ7Z4L5 1316 aa28.46■■■□□ 2.15
SLC12A4-217ENST00000576462 LRRC37A3O60309 1634 aa28.46■■■□□ 2.15
SLC12A4-217ENST00000576462 WDR17Q8IZU2 1322 aa28.45■■■□□ 2.15
SLC12A4-217ENST00000576462 ZNF692Q9BU19 519 aaPredicted RBP28.45■■■□□ 2.14
SLC12A4-217ENST00000576462 COL18A1P39060 1754 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms