RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 AHDC1Q5TGY3 1603 aaPredicted RBP15.86■□□□□ 0.13
ATP2A3-213ENST00000574202 USP6P35125 1406 aa15.86■□□□□ 0.13
ATP2A3-213ENST00000574202 CCER2I3L3R5 266 aa15.86■□□□□ 0.13
ATP2A3-213ENST00000574202 TRPM3Q9HCF6 1732 aaPredicted RBP15.85■□□□□ 0.13
ATP2A3-213ENST00000574202 UBAP1LF5GYI3 381 aa15.85■□□□□ 0.13
ATP2A3-213ENST00000574202 MYBBP1AQ9BQG0 1328 aaKnown RBP15.85■□□□□ 0.13
ATP2A3-213ENST00000574202 PXDNQ92626 1479 aa15.84■□□□□ 0.13
ATP2A3-213ENST00000574202 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
ATP2A3-213ENST00000574202 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.13
ATP2A3-213ENST00000574202 FYB1O15117 783 aa15.83■□□□□ 0.12
ATP2A3-213ENST00000574202 TOM1O60784 492 aa15.83■□□□□ 0.12
ATP2A3-213ENST00000574202 PSME1Q06323 249 aa15.83■□□□□ 0.12
ATP2A3-213ENST00000574202 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
ATP2A3-213ENST00000574202 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.12
ATP2A3-213ENST00000574202 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
ATP2A3-213ENST00000574202 SSH2Q76I76 1423 aa15.82■□□□□ 0.12
ATP2A3-213ENST00000574202 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
ATP2A3-213ENST00000574202 NME9Q86XW9 330 aa15.81■□□□□ 0.12
ATP2A3-213ENST00000574202 TTC21AQ8NDW8 1320 aa15.81■□□□□ 0.12
ATP2A3-213ENST00000574202 FOXO3O43524 673 aa15.8■□□□□ 0.12
ATP2A3-213ENST00000574202 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
ATP2A3-213ENST00000574202 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
ATP2A3-213ENST00000574202 PPP2R1AP30153 589 aa15.79■□□□□ 0.12
ATP2A3-213ENST00000574202 NLRP13Q86W25 1043 aa15.79■□□□□ 0.12
ATP2A3-213ENST00000574202 MRS2Q9HD23 443 aa15.79■□□□□ 0.12
ATP2A3-213ENST00000574202 ALS2Q96Q42 1657 aa15.79■□□□□ 0.12
ATP2A3-213ENST00000574202 SOS2Q07890 1332 aaPredicted RBP15.78■□□□□ 0.12
ATP2A3-213ENST00000574202 PHLPP1O60346 1717 aa15.78■□□□□ 0.12
ATP2A3-213ENST00000574202 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
ATP2A3-213ENST00000574202 PIP4K2BP78356 416 aa15.78■□□□□ 0.12
ATP2A3-213ENST00000574202 COG3Q96JB2 828 aa15.78■□□□□ 0.12
ATP2A3-213ENST00000574202 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.12
ATP2A3-213ENST00000574202 KRT28Q7Z3Y7 464 aa15.77■□□□□ 0.12
ATP2A3-213ENST00000574202 NPHP3Q7Z494 1330 aa15.76■□□□□ 0.11
ATP2A3-213ENST00000574202 XPCQ01831 940 aaPredicted RBP15.76■□□□□ 0.11
ATP2A3-213ENST00000574202 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
ATP2A3-213ENST00000574202 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
ATP2A3-213ENST00000574202 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
ATP2A3-213ENST00000574202 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
ATP2A3-213ENST00000574202 ABTB2Q8N961 1025 aa15.75■□□□□ 0.11
ATP2A3-213ENST00000574202 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
ATP2A3-213ENST00000574202 SBNO1A3KN83 1393 aa15.74■□□□□ 0.11
ATP2A3-213ENST00000574202 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
ATP2A3-213ENST00000574202 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
ATP2A3-213ENST00000574202 NLRP6P59044 892 aa15.73■□□□□ 0.11
ATP2A3-213ENST00000574202 FBXO41Q8TF61 875 aa15.73■□□□□ 0.11
ATP2A3-213ENST00000574202 OVOS2A0A0J9YW53 1432 aa15.73■□□□□ 0.11
ATP2A3-213ENST00000574202 OVOS2Q6IE36 1432 aa15.73■□□□□ 0.11
ATP2A3-213ENST00000574202 COL22A1Q8NFW1 1626 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-213ENST00000574202 MED1Q15648 1581 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-213ENST00000574202 TNS3Q68CZ2 1445 aa15.72■□□□□ 0.11
ATP2A3-213ENST00000574202 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
ATP2A3-213ENST00000574202 LMOD2Q6P5Q4 547 aa15.71■□□□□ 0.11
ATP2A3-213ENST00000574202 ABCA3Q99758 1704 aa15.71■□□□□ 0.1
ATP2A3-213ENST00000574202 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
ATP2A3-213ENST00000574202 HSPA1LP34931 641 aa15.7■□□□□ 0.1
ATP2A3-213ENST00000574202 MTHFSP49914 203 aa15.7■□□□□ 0.1
ATP2A3-213ENST00000574202 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
ATP2A3-213ENST00000574202 SPATA31A3Q5VYP0 1347 aa15.69■□□□□ 0.1
ATP2A3-213ENST00000574202 AATKQ6ZMQ8 1374 aa15.69■□□□□ 0.1
ATP2A3-213ENST00000574202 PNPLA6Q8IY17 1366 aa15.68■□□□□ 0.1
ATP2A3-213ENST00000574202 SOX12O15370 315 aa15.68■□□□□ 0.1
ATP2A3-213ENST00000574202 FAM9BQ8IZU0 186 aa15.68■□□□□ 0.1
ATP2A3-213ENST00000574202 PHRF1Q9P1Y6 1649 aaKnown RBP15.68■□□□□ 0.1
ATP2A3-213ENST00000574202 SLIT3O75094 1523 aa15.67■□□□□ 0.1
ATP2A3-213ENST00000574202 MAP2P11137 1827 aaKnown RBP15.66■□□□□ 0.1
ATP2A3-213ENST00000574202 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
ATP2A3-213ENST00000574202 FBLN1P23142 703 aa15.66■□□□□ 0.1
ATP2A3-213ENST00000574202 PNISRQ8TF01 805 aaKnown RBP15.66■□□□□ 0.1
ATP2A3-213ENST00000574202 YTHDC1Q96MU7 727 aaKnown RBP15.66■□□□□ 0.1
ATP2A3-213ENST00000574202 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
ATP2A3-213ENST00000574202 ARHGEF10O15013 1369 aa15.65■□□□□ 0.1
ATP2A3-213ENST00000574202 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
ATP2A3-213ENST00000574202 KCNH5Q8NCM2 988 aa15.65■□□□□ 0.1
ATP2A3-213ENST00000574202 RRS1Q15050 365 aaKnown RBP15.64■□□□□ 0.09
ATP2A3-213ENST00000574202 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
ATP2A3-213ENST00000574202 SMG6Q86US8 1419 aaKnown RBP15.64■□□□□ 0.09
ATP2A3-213ENST00000574202 EMILIN1Q9Y6C2 1016 aa15.64■□□□□ 0.09
ATP2A3-213ENST00000574202 USP19O94966 1318 aa15.64■□□□□ 0.09
ATP2A3-213ENST00000574202 NFAT5O94916 1531 aa15.63■□□□□ 0.09
ATP2A3-213ENST00000574202 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
ATP2A3-213ENST00000574202 LRRC59Q96AG4 307 aaKnown RBP15.62■□□□□ 0.09
ATP2A3-213ENST00000574202 JCADQ9P266 1359 aa15.62■□□□□ 0.09
ATP2A3-213ENST00000574202 LRP6O75581 1613 aa15.61■□□□□ 0.09
ATP2A3-213ENST00000574202 MAP3K19Q56UN5 1328 aa15.61■□□□□ 0.09
ATP2A3-213ENST00000574202 COL3A1P02461 1466 aaPredicted RBP15.6■□□□□ 0.09
ATP2A3-213ENST00000574202 DIAPH1O60610 1272 aaKnown RBP15.6■□□□□ 0.09
ATP2A3-213ENST00000574202 GCP02774 474 aa15.6■□□□□ 0.09
ATP2A3-213ENST00000574202 AMPHP49418 695 aa15.6■□□□□ 0.09
ATP2A3-213ENST00000574202 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
ATP2A3-213ENST00000574202 INSRP06213 1382 aa15.6■□□□□ 0.09
ATP2A3-213ENST00000574202 PEAK1Q9H792 1746 aa15.59■□□□□ 0.09
ATP2A3-213ENST00000574202 LTN1O94822 1766 aa15.59■□□□□ 0.09
ATP2A3-213ENST00000574202 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
ATP2A3-213ENST00000574202 FLT4P35916 1363 aa15.58■□□□□ 0.08
ATP2A3-213ENST00000574202 KIF24Q5T7B8 1368 aa15.58■□□□□ 0.08
ATP2A3-213ENST00000574202 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
ATP2A3-213ENST00000574202 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
ATP2A3-213ENST00000574202 ADAMTS8Q9UP79 889 aa15.57■□□□□ 0.08
ATP2A3-213ENST00000574202 RTL1A6NKG5 1358 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms