RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 UVSSAQ2YD98 709 aa13.91□□□□□ -0.18
EDC4-207ENST00000573992 RSPH4AQ5TD94 716 aa13.91□□□□□ -0.18
EDC4-207ENST00000573992 DNAJC2Q99543 621 aaKnown RBP13.91□□□□□ -0.18
EDC4-207ENST00000573992 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
EDC4-207ENST00000573992 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
EDC4-207ENST00000573992 UHRF1BP1Q6BDS2 1440 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
EDC4-207ENST00000573992 GOLGA6L19H0YKK7 550 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 GOLGA6L1Q8N7Z2 621 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 SSH1Q8WYL5 1049 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 TESK2Q96S53 571 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
EDC4-207ENST00000573992 U2AF2P26368 475 aaKnown RBP eCLIP13.9□□□□□ -0.184e-7■■□□□ 11.8
EDC4-207ENST00000573992 NUCB1Q02818 461 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 PIBF1Q8WXW3 757 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 TRIM5Q9C035 493 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 ANO2Q9NQ90 1003 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
EDC4-207ENST00000573992 TRERF1Q96PN7 1200 aa13.89□□□□□ -0.19
EDC4-207ENST00000573992 OGFRQ9NZT2 677 aa13.89□□□□□ -0.19
EDC4-207ENST00000573992 ZNF521Q96K83 1311 aa13.89□□□□□ -0.19
EDC4-207ENST00000573992 LMBRD1Q9NUN5 540 aa13.89□□□□□ -0.19
EDC4-207ENST00000573992 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
EDC4-207ENST00000573992 AEBP1Q8IUX7 1158 aa13.89□□□□□ -0.19
EDC4-207ENST00000573992 KIF14Q15058 1648 aa13.88□□□□□ -0.19
EDC4-207ENST00000573992 NPHP1O15259 732 aa13.88□□□□□ -0.19
EDC4-207ENST00000573992 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
EDC4-207ENST00000573992 FIBPO43427 364 aa13.88□□□□□ -0.19
EDC4-207ENST00000573992 TRMT2AQ8IZ69 625 aaKnown RBP13.88□□□□□ -0.19
EDC4-207ENST00000573992 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
EDC4-207ENST00000573992 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
EDC4-207ENST00000573992 API5Q9BZZ5 524 aaKnown RBP13.88□□□□□ -0.19
EDC4-207ENST00000573992 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
EDC4-207ENST00000573992 ARGLU1Q9NWB6 273 aaPredicted RBP13.87□□□□□ -0.19
EDC4-207ENST00000573992 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
EDC4-207ENST00000573992 CCDC192P0DO97 292 aa13.87□□□□□ -0.19
EDC4-207ENST00000573992 TAF7LQ5H9L4 462 aa13.87□□□□□ -0.19
EDC4-207ENST00000573992 CCDC183Q5T5S1 534 aa13.87□□□□□ -0.19
EDC4-207ENST00000573992 KRT222Q8N1A0 295 aa13.86□□□□□ -0.19
EDC4-207ENST00000573992 BECN2A8MW95 431 aa13.86□□□□□ -0.19
EDC4-207ENST00000573992 ERC2O15083 957 aa13.86□□□□□ -0.19
EDC4-207ENST00000573992 HCLS1P14317 486 aaPredicted RBP13.86□□□□□ -0.19
EDC4-207ENST00000573992 C16orf45Q96MC5 204 aaPredicted RBP13.86□□□□□ -0.19
EDC4-207ENST00000573992 SMC3Q9UQE7 1217 aa13.86□□□□□ -0.19
EDC4-207ENST00000573992 GCC2Q8IWJ2 1684 aa13.86□□□□□ -0.19
EDC4-207ENST00000573992 GABPB1Q06547 395 aaPredicted RBP13.85□□□□□ -0.19
EDC4-207ENST00000573992 GDPD2Q9HCC8 539 aa13.85□□□□□ -0.19
EDC4-207ENST00000573992 CWC15Q9P013 229 aaKnown RBP13.85□□□□□ -0.19
EDC4-207ENST00000573992 PZPP20742 1482 aa13.85□□□□□ -0.19
EDC4-207ENST00000573992 TNNT1P13805 278 aa13.85□□□□□ -0.19
EDC4-207ENST00000573992 THOC2Q8NI27 1593 aaKnown RBP13.85□□□□□ -0.19
EDC4-207ENST00000573992 KDM5CP41229 1560 aa13.85□□□□□ -0.19
EDC4-207ENST00000573992 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
EDC4-207ENST00000573992 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
EDC4-207ENST00000573992 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
EDC4-207ENST00000573992 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
EDC4-207ENST00000573992 APPP05067 770 aa13.84□□□□□ -0.19
EDC4-207ENST00000573992 ZSCAN20P17040 1043 aaPredicted RBP13.84□□□□□ -0.19
EDC4-207ENST00000573992 IPO4Q8TEX9 1081 aaKnown RBP13.84□□□□□ -0.19
EDC4-207ENST00000573992 TMEM63CQ9P1W3 806 aa13.84□□□□□ -0.19
EDC4-207ENST00000573992 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
EDC4-207ENST00000573992 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
EDC4-207ENST00000573992 KDM6BO15054 1643 aa13.84□□□□□ -0.19
EDC4-207ENST00000573992 SRPK2P78362 688 aaKnown RBP13.84□□□□□ -0.19
EDC4-207ENST00000573992 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
EDC4-207ENST00000573992 PIK3C2GO75747 1445 aa13.83□□□□□ -0.19
EDC4-207ENST00000573992 BCORL1Q5H9F3 1711 aa13.83□□□□□ -0.19
EDC4-207ENST00000573992 DENND4BO75064 1496 aaPredicted RBP13.83□□□□□ -0.2
EDC4-207ENST00000573992 VPS37CA5D8V6 355 aaPredicted RBP13.83□□□□□ -0.2
EDC4-207ENST00000573992 NOM1Q5C9Z4 860 aaKnown RBP13.83□□□□□ -0.2
EDC4-207ENST00000573992 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.2
EDC4-207ENST00000573992 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
EDC4-207ENST00000573992 ZGPATQ8N5A5 531 aaKnown RBP13.83□□□□□ -0.2
EDC4-207ENST00000573992 COL17A1Q9UMD9 1497 aaPredicted RBP13.82□□□□□ -0.2
EDC4-207ENST00000573992 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
EDC4-207ENST00000573992 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
EDC4-207ENST00000573992 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
EDC4-207ENST00000573992 PRAG1Q86YV5 1406 aa13.82□□□□□ -0.2
EDC4-207ENST00000573992 SAFB2Q14151 953 aaKnown RBP eCLIP13.82□□□□□ -0.2
EDC4-207ENST00000573992 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
EDC4-207ENST00000573992 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
EDC4-207ENST00000573992 GNL2Q13823 731 aaKnown RBP13.81□□□□□ -0.2
EDC4-207ENST00000573992 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.81□□□□□ -0.2
EDC4-207ENST00000573992 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
EDC4-207ENST00000573992 PAXBP1Q9Y5B6 917 aa13.8□□□□□ -0.2
EDC4-207ENST00000573992 WDR62O43379 1518 aa13.8□□□□□ -0.2
EDC4-207ENST00000573992 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
EDC4-207ENST00000573992 TPM4P67936 248 aa13.8□□□□□ -0.2
EDC4-207ENST00000573992 SLC4A10Q6U841 1118 aa13.8□□□□□ -0.2
EDC4-207ENST00000573992 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
EDC4-207ENST00000573992 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
EDC4-207ENST00000573992 ASXL1Q8IXJ9 1541 aa13.79□□□□□ -0.2
EDC4-207ENST00000573992 BICD2Q8TD16 824 aa13.79□□□□□ -0.2
EDC4-207ENST00000573992 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
EDC4-207ENST00000573992 TROQ12816 1431 aaPredicted RBP13.79□□□□□ -0.2
EDC4-207ENST00000573992 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
EDC4-207ENST00000573992 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.2
EDC4-207ENST00000573992 ZBTB40Q9NUA8 1239 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms