RNA–Protein interactions for RNA: ENST00000573702.1

SLC12A4-213, Transcript of solute carrier family 12 member 4, humanhuman

TSL 4

Gene SLC12A4, Length 633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-213ENST00000573702 UPF1Q92900 1129 aaKnown RBP eCLIP20.48■□□□□ 0.87
SLC12A4-213ENST00000573702 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
SLC12A4-213ENST00000573702 SLIT2O94813 1529 aa20.47■□□□□ 0.87
SLC12A4-213ENST00000573702 PPIP5K1Q6PFW1 1433 aa20.46■□□□□ 0.87
SLC12A4-213ENST00000573702 FAM83GA6ND36 823 aa20.46■□□□□ 0.87
SLC12A4-213ENST00000573702 GJD4Q96KN9 370 aaPredicted RBP20.46■□□□□ 0.87
SLC12A4-213ENST00000573702 PLCH1Q4KWH8 1693 aa20.45■□□□□ 0.86
SLC12A4-213ENST00000573702 CARD11Q9BXL7 1154 aa20.45■□□□□ 0.86
SLC12A4-213ENST00000573702 PLEKHG3A1L390 1219 aa20.44■□□□□ 0.86
SLC12A4-213ENST00000573702 CABP1Q9NZU7 370 aa20.44■□□□□ 0.86
SLC12A4-213ENST00000573702 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.43■□□□□ 0.86
SLC12A4-213ENST00000573702 EVC2Q86UK5 1308 aa20.43■□□□□ 0.86
SLC12A4-213ENST00000573702 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
SLC12A4-213ENST00000573702 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
SLC12A4-213ENST00000573702 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
SLC12A4-213ENST00000573702 BTG4Q9NY30 223 aa20.41■□□□□ 0.86
SLC12A4-213ENST00000573702 RALGAPBQ86X10 1494 aa20.41■□□□□ 0.86
SLC12A4-213ENST00000573702 GLI3P10071 1580 aa20.4■□□□□ 0.86
SLC12A4-213ENST00000573702 ZC3H6P61129 1189 aaKnown RBP20.4■□□□□ 0.86
SLC12A4-213ENST00000573702 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.86
SLC12A4-213ENST00000573702 CHRNA2Q15822 529 aa20.39■□□□□ 0.85
SLC12A4-213ENST00000573702 PRDM11Q9NQV5 511 aa20.39■□□□□ 0.85
SLC12A4-213ENST00000573702 NWD2Q9ULI1 1742 aa20.39■□□□□ 0.85
SLC12A4-213ENST00000573702 VPS72Q15906 364 aa20.38■□□□□ 0.85
SLC12A4-213ENST00000573702 A0A0G2JS52 829 aa20.37■□□□□ 0.85
SLC12A4-213ENST00000573702 MYT1Q01538 1121 aa20.37■□□□□ 0.85
SLC12A4-213ENST00000573702 PHRF1Q9P1Y6 1649 aaKnown RBP20.37■□□□□ 0.85
SLC12A4-213ENST00000573702 COL14A1Q05707 1796 aaKnown RBP20.36■□□□□ 0.85
SLC12A4-213ENST00000573702 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
SLC12A4-213ENST00000573702 KIAA0232Q92628 1395 aa20.35■□□□□ 0.85
SLC12A4-213ENST00000573702 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
SLC12A4-213ENST00000573702 NRAPQ86VF7 1730 aa20.34■□□□□ 0.85
SLC12A4-213ENST00000573702 SEPT12Q8IYM1 358 aa20.34■□□□□ 0.85
SLC12A4-213ENST00000573702 STRN4Q9NRL3 753 aa20.34■□□□□ 0.85
SLC12A4-213ENST00000573702 NLRP13Q86W25 1043 aa20.33■□□□□ 0.85
SLC12A4-213ENST00000573702 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
SLC12A4-213ENST00000573702 USP6P35125 1406 aa20.32■□□□□ 0.84
SLC12A4-213ENST00000573702 NLRP6P59044 892 aa20.31■□□□□ 0.84
SLC12A4-213ENST00000573702 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
SLC12A4-213ENST00000573702 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
SLC12A4-213ENST00000573702 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
SLC12A4-213ENST00000573702 GCP02774 474 aa20.28■□□□□ 0.84
SLC12A4-213ENST00000573702 EVA1CP58658 441 aa20.28■□□□□ 0.84
SLC12A4-213ENST00000573702 SOX12O15370 315 aa20.27■□□□□ 0.84
SLC12A4-213ENST00000573702 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
SLC12A4-213ENST00000573702 USP19O94966 1318 aa20.27■□□□□ 0.83
SLC12A4-213ENST00000573702 AKAP12Q02952 1782 aa20.26■□□□□ 0.83
SLC12A4-213ENST00000573702 ST20-MTHFSA0A0A6YYL1 179 aa20.26■□□□□ 0.83
SLC12A4-213ENST00000573702 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
SLC12A4-213ENST00000573702 SPATA31A5Q5VU36 1347 aa20.26■□□□□ 0.83
SLC12A4-213ENST00000573702 TTC21BQ7Z4L5 1316 aa20.26■□□□□ 0.83
SLC12A4-213ENST00000573702 SPATA31A7Q8IWB4 1347 aa20.26■□□□□ 0.83
SLC12A4-213ENST00000573702 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
SLC12A4-213ENST00000573702 KTN1Q86UP2 1357 aaKnown RBP20.25■□□□□ 0.83
SLC12A4-213ENST00000573702 SBNO2Q9Y2G9 1366 aa20.24■□□□□ 0.83
SLC12A4-213ENST00000573702 PIK3C2AO00443 1686 aa20.24■□□□□ 0.83
SLC12A4-213ENST00000573702 ONECUT3O60422 494 aaPredicted RBP20.24■□□□□ 0.83
SLC12A4-213ENST00000573702 KRT27Q7Z3Y8 459 aa20.24■□□□□ 0.83
SLC12A4-213ENST00000573702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.24■□□□□ 0.83
SLC12A4-213ENST00000573702 FAM182BQ5T319 152 aa20.23■□□□□ 0.83
SLC12A4-213ENST00000573702 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
SLC12A4-213ENST00000573702 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
SLC12A4-213ENST00000573702 CAMTA1Q9Y6Y1 1673 aa20.22■□□□□ 0.83
SLC12A4-213ENST00000573702 LARP1Q6PKG0 1096 aaKnown RBP20.21■□□□□ 0.83
SLC12A4-213ENST00000573702 ZRANB1Q9UGI0 708 aa20.21■□□□□ 0.83
SLC12A4-213ENST00000573702 SPATA31A1Q5TZJ5 1347 aa20.21■□□□□ 0.83
SLC12A4-213ENST00000573702 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
SLC12A4-213ENST00000573702 CPDO75976 1380 aa20.2■□□□□ 0.82
SLC12A4-213ENST00000573702 HDGFL2Q7Z4V5 671 aaPredicted RBP20.19■□□□□ 0.82
SLC12A4-213ENST00000573702 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
SLC12A4-213ENST00000573702 TESK2Q96S53 571 aa20.19■□□□□ 0.82
SLC12A4-213ENST00000573702 MON2Q7Z3U7 1717 aa20.19■□□□□ 0.82
SLC12A4-213ENST00000573702 SLIT3O75094 1523 aa20.18■□□□□ 0.82
SLC12A4-213ENST00000573702 LMO7Q8WWI1 1683 aa20.18■□□□□ 0.82
SLC12A4-213ENST00000573702 TTC21AQ8NDW8 1320 aa20.18■□□□□ 0.82
SLC12A4-213ENST00000573702 NME9Q86XW9 330 aa20.17■□□□□ 0.82
SLC12A4-213ENST00000573702 USP47Q96K76 1375 aa20.17■□□□□ 0.82
SLC12A4-213ENST00000573702 CD163L1Q9NR16 1453 aa20.17■□□□□ 0.82
SLC12A4-213ENST00000573702 SF3B2Q13435 895 aaKnown RBP20.16■□□□□ 0.82
SLC12A4-213ENST00000573702 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
SLC12A4-213ENST00000573702 CCDC125Q86Z20 511 aa20.16■□□□□ 0.82
SLC12A4-213ENST00000573702 THSD7AQ9UPZ6 1657 aa20.14■□□□□ 0.81
SLC12A4-213ENST00000573702 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
SLC12A4-213ENST00000573702 KCNH5Q8NCM2 988 aa20.14■□□□□ 0.81
SLC12A4-213ENST00000573702 TERF2IPQ9NYB0 399 aa20.14■□□□□ 0.81
SLC12A4-213ENST00000573702 COL5A2P05997 1499 aaPredicted RBP20.13■□□□□ 0.81
SLC12A4-213ENST00000573702 A0A1W2PP64 1363 aa20.13■□□□□ 0.81
SLC12A4-213ENST00000573702 TCP11L2Q8N4U5 519 aa20.13■□□□□ 0.81
SLC12A4-213ENST00000573702 AXIN2Q9Y2T1 843 aa20.13■□□□□ 0.81
SLC12A4-213ENST00000573702 RGPD5Q99666 1765 aa20.13■□□□□ 0.81
SLC12A4-213ENST00000573702 AATKQ6ZMQ8 1374 aa20.12■□□□□ 0.81
SLC12A4-213ENST00000573702 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
SLC12A4-213ENST00000573702 CSB-PGBD3P0DP91 1061 aa20.11■□□□□ 0.81
SLC12A4-213ENST00000573702 TMF1P82094 1093 aa20.11■□□□□ 0.81
SLC12A4-213ENST00000573702 TOM1L2Q6ZVM7 507 aa20.11■□□□□ 0.81
SLC12A4-213ENST00000573702 ARHGEF25Q86VW2 580 aa20.11■□□□□ 0.81
SLC12A4-213ENST00000573702 COL18A1P39060 1754 aa20.11■□□□□ 0.81
SLC12A4-213ENST00000573702 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
SLC12A4-213ENST00000573702 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
SLC12A4-213ENST00000573702 TIMELESSQ9UNS1 1208 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms