RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
TOM1L1-216ENST00000573607 EVA1BQ9NVM1 165 aa11.4□□□□□ -0.58
TOM1L1-216ENST00000573607 FKBPLQ9UIM3 349 aa11.4□□□□□ -0.58
TOM1L1-216ENST00000573607 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
TOM1L1-216ENST00000573607 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
TOM1L1-216ENST00000573607 ALG2Q9H553 416 aa11.38□□□□□ -0.59
TOM1L1-216ENST00000573607 FBXO45P0C2W1 286 aa11.37□□□□□ -0.59
TOM1L1-216ENST00000573607 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
TOM1L1-216ENST00000573607 SLC6A16Q9GZN6 736 aa11.37□□□□□ -0.59
TOM1L1-216ENST00000573607 S1PR4O95977 384 aa11.35□□□□□ -0.59
TOM1L1-216ENST00000573607 NR1H3Q13133 447 aa11.35□□□□□ -0.59
TOM1L1-216ENST00000573607 PNMA1Q8ND90 353 aa11.35□□□□□ -0.59
TOM1L1-216ENST00000573607 ZBBXA8MT70 800 aa11.33□□□□□ -0.6
TOM1L1-216ENST00000573607 SEMA3FQ13275 785 aa11.32□□□□□ -0.6
TOM1L1-216ENST00000573607 UCN2Q96RP3 112 aa11.32□□□□□ -0.6
TOM1L1-216ENST00000573607 OCSTAMPQ9BR26 566 aa11.32□□□□□ -0.6
TOM1L1-216ENST00000573607 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
TOM1L1-216ENST00000573607 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
TOM1L1-216ENST00000573607 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-216ENST00000573607 RFX1P22670 979 aa11.3□□□□□ -0.6
TOM1L1-216ENST00000573607 RNF166Q96A37 237 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-216ENST00000573607 ZC3H4Q9UPT8 1303 aaKnown RBP11.3□□□□□ -0.6
TOM1L1-216ENST00000573607 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
TOM1L1-216ENST00000573607 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
TOM1L1-216ENST00000573607 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
TOM1L1-216ENST00000573607 FCF1Q9Y324 198 aaKnown RBP11.29□□□□□ -0.6
TOM1L1-216ENST00000573607 SOX11P35716 441 aa11.28□□□□□ -0.6
TOM1L1-216ENST00000573607 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
TOM1L1-216ENST00000573607 ARMC2Q8NEN0 867 aa11.28□□□□□ -0.6
TOM1L1-216ENST00000573607 PALM3A6NDB9 673 aaPredicted RBP11.27□□□□□ -0.61
TOM1L1-216ENST00000573607 TFIP11Q9UBB9 837 aaKnown RBP11.27□□□□□ -0.61
TOM1L1-216ENST00000573607 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
TOM1L1-216ENST00000573607 PTK2Q05397 1052 aa11.26□□□□□ -0.61
TOM1L1-216ENST00000573607 BAP1Q92560 729 aa11.26□□□□□ -0.61
TOM1L1-216ENST00000573607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
TOM1L1-216ENST00000573607 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
TOM1L1-216ENST00000573607 KCNC4Q03721 635 aa11.25□□□□□ -0.61
TOM1L1-216ENST00000573607 LINC01559Q495D7 138 aa11.25□□□□□ -0.61
TOM1L1-216ENST00000573607 NBPF14Q5TI25 921 aa11.25□□□□□ -0.61
TOM1L1-216ENST00000573607 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
TOM1L1-216ENST00000573607 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.61
TOM1L1-216ENST00000573607 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
TOM1L1-216ENST00000573607 SH3BP5LQ7L8J4 393 aa11.23□□□□□ -0.61
TOM1L1-216ENST00000573607 ADAM32Q8TC27 787 aa11.23□□□□□ -0.61
TOM1L1-216ENST00000573607 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
TOM1L1-216ENST00000573607 GPSM3Q9Y4H4 160 aa11.23□□□□□ -0.61
TOM1L1-216ENST00000573607 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
TOM1L1-216ENST00000573607 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
TOM1L1-216ENST00000573607 CARD14Q9BXL6 1004 aa11.22□□□□□ -0.61
TOM1L1-216ENST00000573607 PCDHB9Q9Y5E1 797 aa11.22□□□□□ -0.61
TOM1L1-216ENST00000573607 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
TOM1L1-216ENST00000573607 CDCA8Q53HL2 280 aa11.21□□□□□ -0.61
TOM1L1-216ENST00000573607 PLA2G2CQ5R387 149 aa11.21□□□□□ -0.61
TOM1L1-216ENST00000573607 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
TOM1L1-216ENST00000573607 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
TOM1L1-216ENST00000573607 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
TOM1L1-216ENST00000573607 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
TOM1L1-216ENST00000573607 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 ZBTB33Q86T24 672 aa11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 ZNF511Q8NB15 262 aa11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 FAM174AQ8TBP5 190 aa11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 CEP126Q9P2H0 1117 aa11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 MAFBQ9Y5Q3 323 aaPredicted RBP11.19□□□□□ -0.62
TOM1L1-216ENST00000573607 ATP9BO43861 1147 aa11.18□□□□□ -0.62
TOM1L1-216ENST00000573607 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
TOM1L1-216ENST00000573607 AGERQ15109 404 aa11.17□□□□□ -0.62
TOM1L1-216ENST00000573607 SKIP12755 728 aa11.16□□□□□ -0.62
TOM1L1-216ENST00000573607 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
TOM1L1-216ENST00000573607 SH3BP2P78314 561 aa11.16□□□□□ -0.62
TOM1L1-216ENST00000573607 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
TOM1L1-216ENST00000573607 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
TOM1L1-216ENST00000573607 ERFEQ4G0M1 354 aa11.14□□□□□ -0.63
TOM1L1-216ENST00000573607 BPHLQ86WA6 291 aaPredicted RBP11.14□□□□□ -0.63
TOM1L1-216ENST00000573607 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
TOM1L1-216ENST00000573607 DEPDC4Q8N2C3 294 aa11.14□□□□□ -0.63
TOM1L1-216ENST00000573607 PHTF2Q8N3S3 785 aa11.14□□□□□ -0.63
TOM1L1-216ENST00000573607 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
TOM1L1-216ENST00000573607 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
TOM1L1-216ENST00000573607 TRIM26Q12899 539 aaPredicted RBP11.12□□□□□ -0.63
TOM1L1-216ENST00000573607 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
TOM1L1-216ENST00000573607 SLFNL1Q499Z3 407 aa11.12□□□□□ -0.63
TOM1L1-216ENST00000573607 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
TOM1L1-216ENST00000573607 CARNS1A5YM72 827 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 USP17L4A6NCW7 530 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 USP17L5A8MUK1 530 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 SKOR1P84550 965 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 TRIM32Q13049 653 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 USP17L2Q6R6M4 530 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 USP17L1Q7RTZ2 530 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 RNF135Q8IUD6 432 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
TOM1L1-216ENST00000573607 GIGYF1O75420 1035 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-216ENST00000573607 GGCXP38435 758 aa11.1□□□□□ -0.63
TOM1L1-216ENST00000573607 MCCD1P59942 119 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-216ENST00000573607 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms