RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 CAMKK2Q96RR4 588 aa18.22■□□□□ 0.51
SMIM28-201ENST00000573100 DISP2A7MBM2 1401 aa18.22■□□□□ 0.51
SMIM28-201ENST00000573100 NGDNQ8NEJ9 315 aaKnown RBP18.21■□□□□ 0.51
SMIM28-201ENST00000573100 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
SMIM28-201ENST00000573100 COL14A1Q05707 1796 aaKnown RBP18.2■□□□□ 0.5
SMIM28-201ENST00000573100 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
SMIM28-201ENST00000573100 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
SMIM28-201ENST00000573100 MINK1Q8N4C8 1332 aaPredicted RBP18.2■□□□□ 0.5
SMIM28-201ENST00000573100 APBA3O96018 575 aa18.19■□□□□ 0.5
SMIM28-201ENST00000573100 SPATA31A1Q5TZJ5 1347 aa18.19■□□□□ 0.5
SMIM28-201ENST00000573100 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
SMIM28-201ENST00000573100 EIF3AQ14152 1382 aaKnown RBP18.18■□□□□ 0.5
SMIM28-201ENST00000573100 WASLO00401 505 aaPredicted RBP18.18■□□□□ 0.5
SMIM28-201ENST00000573100 DLC1Q96QB1 1528 aa18.18■□□□□ 0.5
SMIM28-201ENST00000573100 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
SMIM28-201ENST00000573100 TRPM3Q9HCF6 1732 aaPredicted RBP18.16■□□□□ 0.5
SMIM28-201ENST00000573100 CHRNA2Q15822 529 aa18.16■□□□□ 0.5
SMIM28-201ENST00000573100 PARD3Q8TEW0 1356 aa18.16■□□□□ 0.5
SMIM28-201ENST00000573100 PDE3BQ13370 1112 aa18.15■□□□□ 0.5
SMIM28-201ENST00000573100 KIAA0232Q92628 1395 aa18.15■□□□□ 0.5
SMIM28-201ENST00000573100 YY1P25490 414 aa18.14■□□□□ 0.49
SMIM28-201ENST00000573100 EVA1CP58658 441 aa18.14■□□□□ 0.49
SMIM28-201ENST00000573100 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
SMIM28-201ENST00000573100 NBPF14Q5TI25 921 aa18.14■□□□□ 0.49
SMIM28-201ENST00000573100 USP35Q9P2H5 1018 aa18.14■□□□□ 0.49
SMIM28-201ENST00000573100 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
SMIM28-201ENST00000573100 THSD7AQ9UPZ6 1657 aa18.14■□□□□ 0.49
SMIM28-201ENST00000573100 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
SMIM28-201ENST00000573100 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
SMIM28-201ENST00000573100 BARGINQ6ZT62 677 aa18.11■□□□□ 0.49
SMIM28-201ENST00000573100 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
SMIM28-201ENST00000573100 TNS1Q9HBL0 1735 aaKnown RBP18.11■□□□□ 0.49
SMIM28-201ENST00000573100 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
SMIM28-201ENST00000573100 NUDT16Q96DE0 195 aaKnown RBP18.1■□□□□ 0.49
SMIM28-201ENST00000573100 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
SMIM28-201ENST00000573100 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
SMIM28-201ENST00000573100 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
SMIM28-201ENST00000573100 SPON1Q9HCB6 807 aa18.08■□□□□ 0.48
SMIM28-201ENST00000573100 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.48
SMIM28-201ENST00000573100 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
SMIM28-201ENST00000573100 DCAF11Q8TEB1 546 aa18.07■□□□□ 0.48
SMIM28-201ENST00000573100 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
SMIM28-201ENST00000573100 KCNQ2O43526 872 aa18.05■□□□□ 0.48
SMIM28-201ENST00000573100 STAC3Q96MF2 364 aa18.05■□□□□ 0.48
SMIM28-201ENST00000573100 CRYBG1Q9Y4K1 1723 aa18.05■□□□□ 0.48
SMIM28-201ENST00000573100 SSH2Q76I76 1423 aa18.05■□□□□ 0.48
SMIM28-201ENST00000573100 CDK19Q9BWU1 502 aa18.04■□□□□ 0.48
SMIM28-201ENST00000573100 C11orf95C9JLR9 678 aaPredicted RBP18.03■□□□□ 0.48
SMIM28-201ENST00000573100 ABTB2Q8N961 1025 aa18.03■□□□□ 0.48
SMIM28-201ENST00000573100 THRAP3Q9Y2W1 955 aaKnown RBP18.03■□□□□ 0.48
SMIM28-201ENST00000573100 ACEP12821 1306 aa18.02■□□□□ 0.48
SMIM28-201ENST00000573100 ATP7BP35670 1465 aa18.02■□□□□ 0.48
SMIM28-201ENST00000573100 CCDC61Q9Y6R9 512 aa18.02■□□□□ 0.48
SMIM28-201ENST00000573100 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
SMIM28-201ENST00000573100 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
SMIM28-201ENST00000573100 CAMTA1Q9Y6Y1 1673 aa17.99■□□□□ 0.47
SMIM28-201ENST00000573100 CPDO75976 1380 aa17.99■□□□□ 0.47
SMIM28-201ENST00000573100 NINLQ9Y2I6 1382 aa17.99■□□□□ 0.47
SMIM28-201ENST00000573100 GCP02774 474 aa17.98■□□□□ 0.47
SMIM28-201ENST00000573100 NLRP13Q86W25 1043 aa17.98■□□□□ 0.47
SMIM28-201ENST00000573100 RREB1Q92766 1687 aa17.98■□□□□ 0.47
SMIM28-201ENST00000573100 NUP188Q5SRE5 1749 aa17.97■□□□□ 0.47
SMIM28-201ENST00000573100 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
SMIM28-201ENST00000573100 ITSN1Q15811 1721 aa17.96■□□□□ 0.47
SMIM28-201ENST00000573100 PLSCR1O15162 318 aa17.96■□□□□ 0.47
SMIM28-201ENST00000573100 USP19O94966 1318 aa17.96■□□□□ 0.46
SMIM28-201ENST00000573100 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
SMIM28-201ENST00000573100 DDB1Q16531 1140 aa17.93■□□□□ 0.46
SMIM28-201ENST00000573100 OVOS2A0A0G2JMS6 1433 aa17.92■□□□□ 0.46
SMIM28-201ENST00000573100 OVOS2A0A0J9YW53 1432 aa17.92■□□□□ 0.46
SMIM28-201ENST00000573100 OVOS2Q6IE36 1432 aa17.92■□□□□ 0.46
SMIM28-201ENST00000573100 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
SMIM28-201ENST00000573100 BCL11BQ9C0K0 894 aaPredicted RBP17.92■□□□□ 0.46
SMIM28-201ENST00000573100 CRB1P82279 1406 aa17.91■□□□□ 0.46
SMIM28-201ENST00000573100 COL5A2P05997 1499 aaPredicted RBP17.91■□□□□ 0.46
SMIM28-201ENST00000573100 ANO8Q9HCE9 1232 aaPredicted RBP17.91■□□□□ 0.46
SMIM28-201ENST00000573100 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
SMIM28-201ENST00000573100 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
SMIM28-201ENST00000573100 SRPK2P78362 688 aaKnown RBP17.9■□□□□ 0.46
SMIM28-201ENST00000573100 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.46
SMIM28-201ENST00000573100 ZBTB7AO95365 584 aa17.89■□□□□ 0.45
SMIM28-201ENST00000573100 NLRP6P59044 892 aa17.89■□□□□ 0.45
SMIM28-201ENST00000573100 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
SMIM28-201ENST00000573100 PTF1AQ7RTS3 328 aa17.89■□□□□ 0.45
SMIM28-201ENST00000573100 PROM2Q8N271 834 aa17.89■□□□□ 0.45
SMIM28-201ENST00000573100 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
SMIM28-201ENST00000573100 AATKQ6ZMQ8 1374 aa17.88■□□□□ 0.45
SMIM28-201ENST00000573100 PARP4Q9UKK3 1724 aaKnown RBP17.87■□□□□ 0.45
SMIM28-201ENST00000573100 CABP2Q9NPB3 220 aa17.87■□□□□ 0.45
SMIM28-201ENST00000573100 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
SMIM28-201ENST00000573100 BRD4O60885 1362 aaPredicted RBP17.87■□□□□ 0.45
SMIM28-201ENST00000573100 MARCH10Q8NA82 808 aaPredicted RBP17.86■□□□□ 0.45
SMIM28-201ENST00000573100 ZNF784Q8NCA9 323 aaPredicted RBP17.86■□□□□ 0.45
SMIM28-201ENST00000573100 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
SMIM28-201ENST00000573100 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
SMIM28-201ENST00000573100 UTRNP46939 3433 aa17.85■□□□□ 0.45
SMIM28-201ENST00000573100 PTGER2P43116 358 aa17.85■□□□□ 0.45
SMIM28-201ENST00000573100 TOPAZ1Q8N9V7 1692 aa17.85■□□□□ 0.45
SMIM28-201ENST00000573100 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
SMIM28-201ENST00000573100 NBPF1Q3BBV0 1214 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms