RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ARHGEF10O15013 1369 aa14.53□□□□□ -0.08
GTF3C1-213ENST00000571886 RXRBP28702 533 aa14.53□□□□□ -0.08
GTF3C1-213ENST00000571886 BCL9LQ86UU0 1499 aa14.52□□□□□ -0.08
GTF3C1-213ENST00000571886 ST20-MTHFSA0A0A6YYL1 179 aa14.52□□□□□ -0.09
GTF3C1-213ENST00000571886 CRYBG1Q9Y4K1 1723 aa14.52□□□□□ -0.09
GTF3C1-213ENST00000571886 FAM83GA6ND36 823 aa14.51□□□□□ -0.09
GTF3C1-213ENST00000571886 HAP1P54257 671 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-213ENST00000571886 TESK2Q96S53 571 aa14.51□□□□□ -0.09
GTF3C1-213ENST00000571886 SBNO2Q9Y2G9 1366 aa14.5□□□□□ -0.09
GTF3C1-213ENST00000571886 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
GTF3C1-213ENST00000571886 ATRNO75882 1429 aa14.49□□□□□ -0.09
GTF3C1-213ENST00000571886 SLIT2O94813 1529 aa14.49□□□□□ -0.09
GTF3C1-213ENST00000571886 RBM6P78332 1123 aaKnown RBP14.48□□□□□ -0.09
GTF3C1-213ENST00000571886 ABTB2Q8N961 1025 aa14.48□□□□□ -0.09
GTF3C1-213ENST00000571886 TRPC5Q9UL62 973 aaPredicted RBP14.48□□□□□ -0.09
GTF3C1-213ENST00000571886 USP6P35125 1406 aa14.48□□□□□ -0.09
GTF3C1-213ENST00000571886 UNC5CLQ8IV45 518 aa14.47□□□□□ -0.09
GTF3C1-213ENST00000571886 SLC12A5Q9H2X9 1139 aa14.47□□□□□ -0.09
GTF3C1-213ENST00000571886 SSH2Q76I76 1423 aa14.47□□□□□ -0.09
GTF3C1-213ENST00000571886 AKAP12Q02952 1782 aa14.47□□□□□ -0.09
GTF3C1-213ENST00000571886 PLCH1Q4KWH8 1693 aa14.46□□□□□ -0.09
GTF3C1-213ENST00000571886 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.1
GTF3C1-213ENST00000571886 USP47Q96K76 1375 aa14.46□□□□□ -0.1
GTF3C1-213ENST00000571886 PHRF1Q9P1Y6 1649 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-213ENST00000571886 RGS12O14924 1447 aa14.45□□□□□ -0.1
GTF3C1-213ENST00000571886 ZC3H6P61129 1189 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-213ENST00000571886 CPSF1Q10570 1443 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-213ENST00000571886 CD163L1Q9NR16 1453 aa14.44□□□□□ -0.1
GTF3C1-213ENST00000571886 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-213ENST00000571886 CHRNA2Q15822 529 aa14.44□□□□□ -0.1
GTF3C1-213ENST00000571886 TMC1Q8TDI8 760 aa14.44□□□□□ -0.1
GTF3C1-213ENST00000571886 GJD4Q96KN9 370 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-213ENST00000571886 TTC21BQ7Z4L5 1316 aa14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 BTG4Q9NY30 223 aa14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 KIAA0232Q92628 1395 aa14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 NWD2Q9ULI1 1742 aa14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 CDK12Q9NYV4 1490 aaPredicted RBP14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 GLI3P10071 1580 aa14.43□□□□□ -0.1
GTF3C1-213ENST00000571886 USP19O94966 1318 aa14.42□□□□□ -0.1
GTF3C1-213ENST00000571886 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
GTF3C1-213ENST00000571886 NLRP6P59044 892 aa14.42□□□□□ -0.1
GTF3C1-213ENST00000571886 NLRP13Q86W25 1043 aa14.42□□□□□ -0.1
GTF3C1-213ENST00000571886 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
GTF3C1-213ENST00000571886 COL14A1Q05707 1796 aaKnown RBP14.42□□□□□ -0.1
GTF3C1-213ENST00000571886 GCP02774 474 aa14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 VPS72Q15906 364 aa14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 PUS7Q96PZ0 661 aaKnown RBP14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 PRDM11Q9NQV5 511 aa14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 KTN1Q86UP2 1357 aaKnown RBP14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 NRKQ7Z2Y5 1582 aa14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 MON2Q7Z3U7 1717 aa14.41□□□□□ -0.1
GTF3C1-213ENST00000571886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.39□□□□□ -0.11
GTF3C1-213ENST00000571886 TMF1P82094 1093 aa14.38□□□□□ -0.11
GTF3C1-213ENST00000571886 NME9Q86XW9 330 aa14.38□□□□□ -0.11
GTF3C1-213ENST00000571886 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
GTF3C1-213ENST00000571886 CCDC9Q9Y3X0 531 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-213ENST00000571886 A0A1W2PP64 1363 aa14.37□□□□□ -0.11
GTF3C1-213ENST00000571886 SLIT3O75094 1523 aa14.37□□□□□ -0.11
GTF3C1-213ENST00000571886 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
GTF3C1-213ENST00000571886 BRWD3Q6RI45 1802 aa14.36□□□□□ -0.11
GTF3C1-213ENST00000571886 CAMTA1Q9Y6Y1 1673 aa14.36□□□□□ -0.11
GTF3C1-213ENST00000571886 CPDO75976 1380 aa14.36□□□□□ -0.11
GTF3C1-213ENST00000571886 ZBTB7CA1YPR0 619 aa14.36□□□□□ -0.11
GTF3C1-213ENST00000571886 SOX12O15370 315 aa14.36□□□□□ -0.11
GTF3C1-213ENST00000571886 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-213ENST00000571886 STRN4Q9NRL3 753 aa14.36□□□□□ -0.11
GTF3C1-213ENST00000571886 ONECUT3O60422 494 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-213ENST00000571886 HSPA5P11021 654 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-213ENST00000571886 LMO7Q8WWI1 1683 aa14.35□□□□□ -0.11
GTF3C1-213ENST00000571886 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
GTF3C1-213ENST00000571886 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
GTF3C1-213ENST00000571886 COL18A1P39060 1754 aa14.34□□□□□ -0.11
GTF3C1-213ENST00000571886 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
GTF3C1-213ENST00000571886 SEPT12Q8IYM1 358 aa14.34□□□□□ -0.11
GTF3C1-213ENST00000571886 TERF2IPQ9NYB0 399 aa14.34□□□□□ -0.11
GTF3C1-213ENST00000571886 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
GTF3C1-213ENST00000571886 RGPD5Q99666 1765 aa14.33□□□□□ -0.12
GTF3C1-213ENST00000571886 FAM98CQ17RN3 349 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-213ENST00000571886 LARP1Q6PKG0 1096 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-213ENST00000571886 USP31Q70CQ4 1352 aa14.33□□□□□ -0.12
GTF3C1-213ENST00000571886 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-213ENST00000571886 EVA1CP58658 441 aa14.32□□□□□ -0.12
GTF3C1-213ENST00000571886 EIF4G2P78344 907 aaKnown RBP eCLIP14.32□□□□□ -0.12
GTF3C1-213ENST00000571886 ARHGEF25Q86VW2 580 aa14.32□□□□□ -0.12
GTF3C1-213ENST00000571886 SPATA31A1Q5TZJ5 1347 aa14.31□□□□□ -0.12
GTF3C1-213ENST00000571886 ANKRD36BQ8N2N9 1353 aa14.31□□□□□ -0.12
GTF3C1-213ENST00000571886 NINLQ9Y2I6 1382 aa14.31□□□□□ -0.12
GTF3C1-213ENST00000571886 NFAT5O94916 1531 aa14.31□□□□□ -0.12
GTF3C1-213ENST00000571886 USP54Q70EL1 1684 aa14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 FBLN1P23142 703 aa14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 CARD14Q9BXL6 1004 aa14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 USP35Q9P2H5 1018 aa14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 AATKQ6ZMQ8 1374 aa14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 MYOM1P52179 1685 aa14.3□□□□□ -0.12
GTF3C1-213ENST00000571886 COL5A2P05997 1499 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms