RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 CCDC24Q8N4L8 307 aa7.95□□□□□ -1.14
NPLOC4-205ENST00000571562 FCF1Q9Y324 198 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-205ENST00000571562 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
NPLOC4-205ENST00000571562 ITGBL1O95965 494 aaPredicted RBP7.93□□□□□ -1.14
NPLOC4-205ENST00000571562 KCNH2Q12809 1159 aa7.93□□□□□ -1.14
NPLOC4-205ENST00000571562 WASHC4Q2M389 1173 aa7.93□□□□□ -1.14
NPLOC4-205ENST00000571562 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
NPLOC4-205ENST00000571562 CALR3Q96L12 384 aaKnown RBP7.93□□□□□ -1.14
NPLOC4-205ENST00000571562 EVA1BQ9NVM1 165 aa7.93□□□□□ -1.14
NPLOC4-205ENST00000571562 PTCRAQ6ISU1 281 aaPredicted RBP7.92□□□□□ -1.14
NPLOC4-205ENST00000571562 PNMA1Q8ND90 353 aa7.92□□□□□ -1.14
NPLOC4-205ENST00000571562 UNC93B1Q9H1C4 597 aa7.92□□□□□ -1.14
NPLOC4-205ENST00000571562 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
NPLOC4-205ENST00000571562 PPEF1O14829 653 aaPredicted RBP7.91□□□□□ -1.14
NPLOC4-205ENST00000571562 ARXQ96QS3 562 aa7.91□□□□□ -1.14
NPLOC4-205ENST00000571562 ZC3H4Q9UPT8 1303 aaKnown RBP7.91□□□□□ -1.14
NPLOC4-205ENST00000571562 KCNC4Q03721 635 aa7.9□□□□□ -1.14
NPLOC4-205ENST00000571562 NR1H3Q13133 447 aa7.9□□□□□ -1.14
NPLOC4-205ENST00000571562 LINC01559Q495D7 138 aa7.9□□□□□ -1.14
NPLOC4-205ENST00000571562 OCSTAMPQ9BR26 566 aa7.9□□□□□ -1.14
NPLOC4-205ENST00000571562 ZBBXA8MT70 800 aa7.89□□□□□ -1.15
NPLOC4-205ENST00000571562 MMRN1Q13201 1228 aa7.89□□□□□ -1.15
NPLOC4-205ENST00000571562 PLA2G2CQ5R387 149 aa7.89□□□□□ -1.15
NPLOC4-205ENST00000571562 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
NPLOC4-205ENST00000571562 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
NPLOC4-205ENST00000571562 RNF223E7ERA6 249 aa7.88□□□□□ -1.15
NPLOC4-205ENST00000571562 HOMEZQ8IX15 550 aa7.88□□□□□ -1.15
NPLOC4-205ENST00000571562 UCN2Q96RP3 112 aa7.88□□□□□ -1.15
NPLOC4-205ENST00000571562 SERPINA10Q9UK55 444 aa7.88□□□□□ -1.15
NPLOC4-205ENST00000571562 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
NPLOC4-205ENST00000571562 ALG2Q9H553 416 aa7.87□□□□□ -1.15
NPLOC4-205ENST00000571562 SH3BP5LQ7L8J4 393 aa7.86□□□□□ -1.15
NPLOC4-205ENST00000571562 ARMC2Q8NEN0 867 aa7.86□□□□□ -1.15
NPLOC4-205ENST00000571562 GPKOWQ92917 476 aaPredicted RBP eCLIP7.86□□□□□ -1.15
NPLOC4-205ENST00000571562 MAGEB6P1A0A0J9YX57 407 aa7.85□□□□□ -1.15
NPLOC4-205ENST00000571562 PDXDC2PQ6P474 469 aa7.85□□□□□ -1.15
NPLOC4-205ENST00000571562 BAP1Q92560 729 aa7.85□□□□□ -1.15
NPLOC4-205ENST00000571562 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
NPLOC4-205ENST00000571562 PIK3CDO00329 1044 aa7.84□□□□□ -1.15
NPLOC4-205ENST00000571562 SOX11P35716 441 aa7.84□□□□□ -1.15
NPLOC4-205ENST00000571562 EIF4G2P78344 907 aaKnown RBP eCLIP7.84□□□□□ -1.15
NPLOC4-205ENST00000571562 SEMA3FQ13275 785 aa7.84□□□□□ -1.15
NPLOC4-205ENST00000571562 ZNF511Q8NB15 262 aa7.84□□□□□ -1.15
NPLOC4-205ENST00000571562 ADAM32Q8TC27 787 aa7.84□□□□□ -1.15
NPLOC4-205ENST00000571562 ARHGAP9Q9BRR9 750 aa7.84□□□□□ -1.15
NPLOC4-205ENST00000571562 PTK2Q05397 1052 aa7.83□□□□□ -1.16
NPLOC4-205ENST00000571562 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
NPLOC4-205ENST00000571562 PPP1R18Q6NYC8 613 aa7.83□□□□□ -1.16
NPLOC4-205ENST00000571562 ANKLE1Q8NAG6 615 aa7.83□□□□□ -1.16
NPLOC4-205ENST00000571562 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
NPLOC4-205ENST00000571562 PCDHB9Q9Y5E1 797 aa7.83□□□□□ -1.16
NPLOC4-205ENST00000571562 TRIM32Q13049 653 aa7.82□□□□□ -1.16
NPLOC4-205ENST00000571562 CFAP70Q5T0N1 1121 aa7.82□□□□□ -1.16
NPLOC4-205ENST00000571562 SH3RF1Q7Z6J0 888 aa7.82□□□□□ -1.16
NPLOC4-205ENST00000571562 PALM3A6NDB9 673 aaPredicted RBP7.81□□□□□ -1.16
NPLOC4-205ENST00000571562 GGCXP38435 758 aa7.81□□□□□ -1.16
NPLOC4-205ENST00000571562 AGERQ15109 404 aa7.81□□□□□ -1.16
NPLOC4-205ENST00000571562 FAM174AQ8TBP5 190 aa7.81□□□□□ -1.16
NPLOC4-205ENST00000571562 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
NPLOC4-205ENST00000571562 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.8□□□□□ -1.16
NPLOC4-205ENST00000571562 RFX1P22670 979 aa7.8□□□□□ -1.16
NPLOC4-205ENST00000571562 SH3BP2P78314 561 aa7.8□□□□□ -1.16
NPLOC4-205ENST00000571562 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
NPLOC4-205ENST00000571562 TBC1D9Q6ZT07 1266 aa7.8□□□□□ -1.16
NPLOC4-205ENST00000571562 ZBTB33Q86T24 672 aa7.8□□□□□ -1.16
NPLOC4-205ENST00000571562 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.8□□□□□ -1.16
NPLOC4-205ENST00000571562 SKOR1P84550 965 aa7.79□□□□□ -1.16
NPLOC4-205ENST00000571562 EMID1Q96A84 441 aaPredicted RBP7.79□□□□□ -1.16
NPLOC4-205ENST00000571562 MAFBQ9Y5Q3 323 aaPredicted RBP7.79□□□□□ -1.16
NPLOC4-205ENST00000571562 ZBTB24O43167 697 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-205ENST00000571562 BPHLQ86WA6 291 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-205ENST00000571562 SLC10A4Q96EP9 437 aa7.78□□□□□ -1.16
NPLOC4-205ENST00000571562 C1QTNF2Q9BXJ5 285 aa7.78□□□□□ -1.16
NPLOC4-205ENST00000571562 TFIP11Q9UBB9 837 aaKnown RBP7.78□□□□□ -1.16
NPLOC4-205ENST00000571562 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
NPLOC4-205ENST00000571562 USP17L5A8MUK1 530 aa7.76□□□□□ -1.17
NPLOC4-205ENST00000571562 ATP9BO43861 1147 aa7.76□□□□□ -1.17
NPLOC4-205ENST00000571562 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
NPLOC4-205ENST00000571562 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 LIAT1Q6ZQX7 453 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 DEPDC4Q8N2C3 294 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 RETREG2Q8NC44 543 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 PBXIP1Q96AQ6 731 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 CEP126Q9P2H0 1117 aa7.75□□□□□ -1.17
NPLOC4-205ENST00000571562 SKIP12755 728 aa7.74□□□□□ -1.17
NPLOC4-205ENST00000571562 WNT7BP56706 349 aa7.74□□□□□ -1.17
NPLOC4-205ENST00000571562 SLFNL1Q499Z3 407 aa7.74□□□□□ -1.17
NPLOC4-205ENST00000571562 RPIAP49247 311 aa7.73□□□□□ -1.17
NPLOC4-205ENST00000571562 CDCA8Q53HL2 280 aa7.73□□□□□ -1.17
NPLOC4-205ENST00000571562 CCDC85AQ96PX6 553 aaPredicted RBP7.73□□□□□ -1.17
NPLOC4-205ENST00000571562 PLA2G2EQ9NZK7 142 aa7.73□□□□□ -1.17
NPLOC4-205ENST00000571562 TLL2Q9Y6L7 1015 aa7.73□□□□□ -1.17
NPLOC4-205ENST00000571562 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 RAB15P59190 212 aa7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
NPLOC4-205ENST00000571562 NCOA4Q13772 614 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms