RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SOCS7O14512 581 aa19.02■□□□□ 0.64
RPAIN-207ENST00000570883 NGLY1Q96IV0 654 aa19.02■□□□□ 0.64
RPAIN-207ENST00000570883 MON2Q7Z3U7 1717 aa19.02■□□□□ 0.63
RPAIN-207ENST00000570883 NWD2Q9ULI1 1742 aa19.02■□□□□ 0.63
RPAIN-207ENST00000570883 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
RPAIN-207ENST00000570883 CABP1Q9NZU7 370 aa19.01■□□□□ 0.63
RPAIN-207ENST00000570883 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
RPAIN-207ENST00000570883 TESK2Q96S53 571 aa19■□□□□ 0.63
RPAIN-207ENST00000570883 USP47Q96K76 1375 aa19■□□□□ 0.63
RPAIN-207ENST00000570883 BCL9LQ86UU0 1499 aa19■□□□□ 0.63
RPAIN-207ENST00000570883 PIK3C2AO00443 1686 aa19■□□□□ 0.63
RPAIN-207ENST00000570883 USP6P35125 1406 aa19■□□□□ 0.63
RPAIN-207ENST00000570883 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
RPAIN-207ENST00000570883 FNBP4Q8N3X1 1017 aaPredicted RBP18.99■□□□□ 0.63
RPAIN-207ENST00000570883 NRAPQ86VF7 1730 aa18.99■□□□□ 0.63
RPAIN-207ENST00000570883 SLIT2O94813 1529 aa18.99■□□□□ 0.63
RPAIN-207ENST00000570883 ST20-MTHFSA0A0A6YYL1 179 aa18.98■□□□□ 0.63
RPAIN-207ENST00000570883 COL14A1Q05707 1796 aaKnown RBP18.97■□□□□ 0.63
RPAIN-207ENST00000570883 ATRNO75882 1429 aa18.97■□□□□ 0.63
RPAIN-207ENST00000570883 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
RPAIN-207ENST00000570883 USP21Q9UK80 565 aa18.96■□□□□ 0.63
RPAIN-207ENST00000570883 CPSF1Q10570 1443 aaKnown RBP18.96■□□□□ 0.63
RPAIN-207ENST00000570883 CD163L1Q9NR16 1453 aa18.96■□□□□ 0.63
RPAIN-207ENST00000570883 HAP1P54257 671 aaPredicted RBP18.95■□□□□ 0.62
RPAIN-207ENST00000570883 BRD4O60885 1362 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-207ENST00000570883 QTRT2Q9H974 415 aaKnown RBP18.94■□□□□ 0.62
RPAIN-207ENST00000570883 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-207ENST00000570883 RXRBP28702 533 aa18.93■□□□□ 0.62
RPAIN-207ENST00000570883 NUTM2GQ5VZR2 741 aa18.93■□□□□ 0.62
RPAIN-207ENST00000570883 GLI3P10071 1580 aa18.93■□□□□ 0.62
RPAIN-207ENST00000570883 RGS12O14924 1447 aa18.92■□□□□ 0.62
RPAIN-207ENST00000570883 USP19O94966 1318 aa18.92■□□□□ 0.62
RPAIN-207ENST00000570883 FAM83GA6ND36 823 aa18.91■□□□□ 0.62
RPAIN-207ENST00000570883 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
RPAIN-207ENST00000570883 TRPC5Q9UL62 973 aaPredicted RBP18.91■□□□□ 0.62
RPAIN-207ENST00000570883 USP54Q70EL1 1684 aa18.91■□□□□ 0.62
RPAIN-207ENST00000570883 SLIT3O75094 1523 aa18.9■□□□□ 0.62
RPAIN-207ENST00000570883 RBM6P78332 1123 aaKnown RBP18.9■□□□□ 0.62
RPAIN-207ENST00000570883 MYOM1P52179 1685 aa18.89■□□□□ 0.61
RPAIN-207ENST00000570883 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
RPAIN-207ENST00000570883 KTN1Q86UP2 1357 aaKnown RBP18.89■□□□□ 0.61
RPAIN-207ENST00000570883 LMO7Q8WWI1 1683 aa18.89■□□□□ 0.61
RPAIN-207ENST00000570883 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
RPAIN-207ENST00000570883 KIAA0232Q92628 1395 aa18.88■□□□□ 0.61
RPAIN-207ENST00000570883 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
RPAIN-207ENST00000570883 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
RPAIN-207ENST00000570883 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
RPAIN-207ENST00000570883 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
RPAIN-207ENST00000570883 EP400Q96L91 3159 aa18.86■□□□□ 0.61
RPAIN-207ENST00000570883 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
RPAIN-207ENST00000570883 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
RPAIN-207ENST00000570883 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
RPAIN-207ENST00000570883 CPDO75976 1380 aa18.84■□□□□ 0.61
RPAIN-207ENST00000570883 NINLQ9Y2I6 1382 aa18.84■□□□□ 0.61
RPAIN-207ENST00000570883 COL18A1P39060 1754 aa18.84■□□□□ 0.61
RPAIN-207ENST00000570883 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
RPAIN-207ENST00000570883 PRDM11Q9NQV5 511 aa18.84■□□□□ 0.61
RPAIN-207ENST00000570883 RGPD5Q99666 1765 aa18.83■□□□□ 0.61
RPAIN-207ENST00000570883 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
RPAIN-207ENST00000570883 SLC24A1O60721 1099 aa18.83■□□□□ 0.6
RPAIN-207ENST00000570883 NLRP6P59044 892 aa18.83■□□□□ 0.6
RPAIN-207ENST00000570883 TMF1P82094 1093 aa18.83■□□□□ 0.6
RPAIN-207ENST00000570883 CHRNA2Q15822 529 aa18.83■□□□□ 0.6
RPAIN-207ENST00000570883 GJD4Q96KN9 370 aaPredicted RBP18.83■□□□□ 0.6
RPAIN-207ENST00000570883 BTG4Q9NY30 223 aa18.83■□□□□ 0.6
RPAIN-207ENST00000570883 NFAT5O94916 1531 aa18.83■□□□□ 0.6
RPAIN-207ENST00000570883 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.6
RPAIN-207ENST00000570883 CAMTA1Q9Y6Y1 1673 aa18.82■□□□□ 0.6
RPAIN-207ENST00000570883 GCP02774 474 aa18.82■□□□□ 0.6
RPAIN-207ENST00000570883 VPS72Q15906 364 aa18.82■□□□□ 0.6
RPAIN-207ENST00000570883 LTN1O94822 1766 aa18.81■□□□□ 0.6
RPAIN-207ENST00000570883 HDGFL2Q7Z4V5 671 aaPredicted RBP18.8■□□□□ 0.6
RPAIN-207ENST00000570883 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
RPAIN-207ENST00000570883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.79■□□□□ 0.6
RPAIN-207ENST00000570883 ZRANB1Q9UGI0 708 aa18.79■□□□□ 0.6
RPAIN-207ENST00000570883 USP31Q70CQ4 1352 aa18.79■□□□□ 0.6
RPAIN-207ENST00000570883 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
RPAIN-207ENST00000570883 NME9Q86XW9 330 aa18.78■□□□□ 0.6
RPAIN-207ENST00000570883 ANKRD36BQ8N2N9 1353 aa18.78■□□□□ 0.6
RPAIN-207ENST00000570883 THSD7AQ9UPZ6 1657 aa18.77■□□□□ 0.6
RPAIN-207ENST00000570883 HSPA5P11021 654 aaKnown RBP18.77■□□□□ 0.6
RPAIN-207ENST00000570883 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
RPAIN-207ENST00000570883 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
RPAIN-207ENST00000570883 EIF4G2P78344 907 aaKnown RBP eCLIP18.76■□□□□ 0.59
RPAIN-207ENST00000570883 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
RPAIN-207ENST00000570883 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
RPAIN-207ENST00000570883 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
RPAIN-207ENST00000570883 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
RPAIN-207ENST00000570883 AATKQ6ZMQ8 1374 aa18.74■□□□□ 0.59
RPAIN-207ENST00000570883 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
RPAIN-207ENST00000570883 WNK3Q9BYP7 1800 aa18.73■□□□□ 0.59
RPAIN-207ENST00000570883 SOX12O15370 315 aa18.73■□□□□ 0.59
RPAIN-207ENST00000570883 STRN4Q9NRL3 753 aa18.73■□□□□ 0.59
RPAIN-207ENST00000570883 ABCC6O95255 1503 aa18.73■□□□□ 0.59
RPAIN-207ENST00000570883 ONECUT3O60422 494 aaPredicted RBP18.72■□□□□ 0.59
RPAIN-207ENST00000570883 ZBTB7CA1YPR0 619 aa18.71■□□□□ 0.59
RPAIN-207ENST00000570883 ARHGEF25Q86VW2 580 aa18.71■□□□□ 0.59
RPAIN-207ENST00000570883 KCNH5Q8NCM2 988 aa18.71■□□□□ 0.59
RPAIN-207ENST00000570883 UPF1Q92900 1129 aaKnown RBP eCLIP18.71■□□□□ 0.59
RPAIN-207ENST00000570883 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms