RNA–Protein interactions for RNA: ENST00000570623.1

TOM1L1-206, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-206ENST00000570623 PUS10Q3MIT2 529 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-206ENST00000570623 CFAP70Q5T0N1 1121 aa9.38□□□□□ -0.91
TOM1L1-206ENST00000570623 PPP1R12CQ9BZL4 782 aa9.38□□□□□ -0.91
TOM1L1-206ENST00000570623 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-206ENST00000570623 PPP4CP60510 307 aa9.37□□□□□ -0.91
TOM1L1-206ENST00000570623 LYPD8Q6UX82 237 aa9.36□□□□□ -0.91
TOM1L1-206ENST00000570623 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-206ENST00000570623 NRG2O14511 850 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-206ENST00000570623 PPP1R18Q6NYC8 613 aa9.35□□□□□ -0.91
TOM1L1-206ENST00000570623 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
TOM1L1-206ENST00000570623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 RFX1P22670 979 aa9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 RNF19BQ6ZMZ0 732 aa9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 MTRQ99707 1265 aa9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
TOM1L1-206ENST00000570623 EIF4G2P78344 907 aaKnown RBP eCLIP9.33□□□□□ -0.92
TOM1L1-206ENST00000570623 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
TOM1L1-206ENST00000570623 BRICD5Q6PL45 260 aa9.33□□□□□ -0.92
TOM1L1-206ENST00000570623 BLOC1S3Q6QNY0 202 aa9.33□□□□□ -0.92
TOM1L1-206ENST00000570623 ZNF516Q92618 1163 aa9.33□□□□□ -0.92
TOM1L1-206ENST00000570623 CSB-PGBD3P0DP91 1061 aa9.31□□□□□ -0.92
TOM1L1-206ENST00000570623 NR1H3Q13133 447 aa9.31□□□□□ -0.92
TOM1L1-206ENST00000570623 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
TOM1L1-206ENST00000570623 NR1I2O75469 434 aa9.3□□□□□ -0.92
TOM1L1-206ENST00000570623 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
TOM1L1-206ENST00000570623 LMOD1P29536 600 aaPredicted RBP9.3□□□□□ -0.92
TOM1L1-206ENST00000570623 APLP1P51693 650 aa9.3□□□□□ -0.92
TOM1L1-206ENST00000570623 IL21Q9HBE4 155 aa9.3□□□□□ -0.92
TOM1L1-206ENST00000570623 TFIP11Q9UBB9 837 aaKnown RBP9.3□□□□□ -0.92
TOM1L1-206ENST00000570623 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 PTPRNQ16849 979 aa9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 NKX2-3Q8TAU0 364 aa9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 THAP11Q96EK4 314 aa9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 FKBPLQ9UIM3 349 aa9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 MAFBQ9Y5Q3 323 aaPredicted RBP9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
TOM1L1-206ENST00000570623 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
TOM1L1-206ENST00000570623 JUNDP17535 347 aa9.28□□□□□ -0.92
TOM1L1-206ENST00000570623 RANGAP1P46060 587 aaPredicted RBP9.28□□□□□ -0.92
TOM1L1-206ENST00000570623 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
TOM1L1-206ENST00000570623 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
TOM1L1-206ENST00000570623 FBXO45P0C2W1 286 aa9.27□□□□□ -0.93
TOM1L1-206ENST00000570623 ATP9BO43861 1147 aa9.26□□□□□ -0.93
TOM1L1-206ENST00000570623 ATG7O95352 703 aa9.26□□□□□ -0.93
TOM1L1-206ENST00000570623 BRD1O95696 1058 aa9.26□□□□□ -0.93
TOM1L1-206ENST00000570623 PDZRN3Q9UPQ7 1066 aa9.26□□□□□ -0.93
TOM1L1-206ENST00000570623 MSS51Q4VC12 460 aa9.25□□□□□ -0.93
TOM1L1-206ENST00000570623 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
TOM1L1-206ENST00000570623 ZNF775Q96BV0 537 aaPredicted RBP9.25□□□□□ -0.93
TOM1L1-206ENST00000570623 MAP10Q9P2G4 905 aa9.25□□□□□ -0.93
TOM1L1-206ENST00000570623 KCNA1Q09470 495 aa9.24□□□□□ -0.93
TOM1L1-206ENST00000570623 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
TOM1L1-206ENST00000570623 NFATC2IPQ8NCF5 419 aa9.24□□□□□ -0.93
TOM1L1-206ENST00000570623 GPSM3Q9Y4H4 160 aa9.23□□□□□ -0.93
TOM1L1-206ENST00000570623 DXOO77932 396 aaKnown RBP9.22□□□□□ -0.93
TOM1L1-206ENST00000570623 CCNYL3P0C7X3 344 aa9.22□□□□□ -0.93
TOM1L1-206ENST00000570623 CTHP32929 405 aa9.22□□□□□ -0.93
TOM1L1-206ENST00000570623 ARMC2Q8NEN0 867 aa9.22□□□□□ -0.93
TOM1L1-206ENST00000570623 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
TOM1L1-206ENST00000570623 GPKOWQ92917 476 aaPredicted RBP eCLIP9.22□□□□□ -0.93
TOM1L1-206ENST00000570623 TMCO4Q5TGY1 634 aa9.21□□□□□ -0.94
TOM1L1-206ENST00000570623 GZF1Q9H116 711 aaPredicted RBP9.21□□□□□ -0.94
TOM1L1-206ENST00000570623 MMP16P51512 607 aa9.2□□□□□ -0.94
TOM1L1-206ENST00000570623 COPS2P61201 443 aa9.2□□□□□ -0.94
TOM1L1-206ENST00000570623 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
TOM1L1-206ENST00000570623 EVA1BQ9NVM1 165 aa9.2□□□□□ -0.94
TOM1L1-206ENST00000570623 TMEM88BA6NKF7 163 aa9.19□□□□□ -0.94
TOM1L1-206ENST00000570623 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
TOM1L1-206ENST00000570623 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
TOM1L1-206ENST00000570623 PDXDC2PQ6P474 469 aa9.19□□□□□ -0.94
TOM1L1-206ENST00000570623 FAM160A2Q8N612 972 aaPredicted RBP9.19□□□□□ -0.94
TOM1L1-206ENST00000570623 SPSB2Q99619 263 aa9.19□□□□□ -0.94
TOM1L1-206ENST00000570623 NUDT12Q9BQG2 462 aa9.19□□□□□ -0.94
TOM1L1-206ENST00000570623 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 PTK2Q05397 1052 aa9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 KCNH2Q12809 1159 aa9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 ELOAQ14241 798 aaKnown RBP9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 KANK4Q5T7N3 995 aaPredicted RBP9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 NBPF14Q5TI25 921 aa9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
TOM1L1-206ENST00000570623 USP17L3A6NCW0 530 aa9.17□□□□□ -0.94
TOM1L1-206ENST00000570623 USP17L4A6NCW7 530 aa9.17□□□□□ -0.94
TOM1L1-206ENST00000570623 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
TOM1L1-206ENST00000570623 USP17L1Q7RTZ2 530 aa9.17□□□□□ -0.94
TOM1L1-206ENST00000570623 CARNS1A5YM72 827 aa9.16□□□□□ -0.94
TOM1L1-206ENST00000570623 USP17L5A8MUK1 530 aa9.16□□□□□ -0.94
TOM1L1-206ENST00000570623 SKIP12755 728 aa9.16□□□□□ -0.94
TOM1L1-206ENST00000570623 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
TOM1L1-206ENST00000570623 PRDM9Q9NQV7 894 aa9.15□□□□□ -0.94
TOM1L1-206ENST00000570623 MFAP1P55081 439 aaKnown RBP9.14□□□□□ -0.95
TOM1L1-206ENST00000570623 B4GALNT3Q6L9W6 998 aa9.14□□□□□ -0.95
TOM1L1-206ENST00000570623 FAM174AQ8TBP5 190 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms