RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 STK26Q9P289 416 aa13.36□□□□□ -0.27
RBFOX1-220ENST00000570188 LRPPRCP42704 1394 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-220ENST00000570188 EID1Q9Y6B2 187 aa13.35□□□□□ -0.27
RBFOX1-220ENST00000570188 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
RBFOX1-220ENST00000570188 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
RBFOX1-220ENST00000570188 ZRANB1Q9UGI0 708 aa13.34□□□□□ -0.27
RBFOX1-220ENST00000570188 LTKP29376 864 aa13.33□□□□□ -0.28
RBFOX1-220ENST00000570188 MED14O60244 1454 aa13.33□□□□□ -0.28
RBFOX1-220ENST00000570188 METP08581 1390 aa13.32□□□□□ -0.28
RBFOX1-220ENST00000570188 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
RBFOX1-220ENST00000570188 LMOD2Q6P5Q4 547 aa13.32□□□□□ -0.28
RBFOX1-220ENST00000570188 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
RBFOX1-220ENST00000570188 TECPR2O15040 1411 aa13.31□□□□□ -0.28
RBFOX1-220ENST00000570188 PRAM1Q96QH2 718 aa13.31□□□□□ -0.28
RBFOX1-220ENST00000570188 POGKQ9P215 609 aa13.31□□□□□ -0.28
RBFOX1-220ENST00000570188 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
RBFOX1-220ENST00000570188 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-220ENST00000570188 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-220ENST00000570188 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-220ENST00000570188 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
RBFOX1-220ENST00000570188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.29□□□□□ -0.28
RBFOX1-220ENST00000570188 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
RBFOX1-220ENST00000570188 CHD2O14647 1828 aaKnown RBP13.29□□□□□ -0.28
RBFOX1-220ENST00000570188 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-220ENST00000570188 PANK3Q9H999 370 aa13.28□□□□□ -0.28
RBFOX1-220ENST00000570188 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
RBFOX1-220ENST00000570188 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.29
RBFOX1-220ENST00000570188 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.29
RBFOX1-220ENST00000570188 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
RBFOX1-220ENST00000570188 ADGRB2O60241 1585 aa13.27□□□□□ -0.29
RBFOX1-220ENST00000570188 USP32Q8NFA0 1604 aa13.27□□□□□ -0.29
RBFOX1-220ENST00000570188 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.29
RBFOX1-220ENST00000570188 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-220ENST00000570188 E2F4Q16254 413 aa13.26□□□□□ -0.29
RBFOX1-220ENST00000570188 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
RBFOX1-220ENST00000570188 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
RBFOX1-220ENST00000570188 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
RBFOX1-220ENST00000570188 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
RBFOX1-220ENST00000570188 PTPRUQ92729 1446 aa13.25□□□□□ -0.29
RBFOX1-220ENST00000570188 ANKLE2Q86XL3 938 aa13.25□□□□□ -0.29
RBFOX1-220ENST00000570188 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-220ENST00000570188 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
RBFOX1-220ENST00000570188 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
RBFOX1-220ENST00000570188 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
RBFOX1-220ENST00000570188 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-220ENST00000570188 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
RBFOX1-220ENST00000570188 SIRT1Q96EB6 747 aa13.24□□□□□ -0.29
RBFOX1-220ENST00000570188 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
RBFOX1-220ENST00000570188 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
RBFOX1-220ENST00000570188 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
RBFOX1-220ENST00000570188 SRPK2P78362 688 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-220ENST00000570188 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 RALBP1Q15311 655 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 KNSTRNQ9Y448 316 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
RBFOX1-220ENST00000570188 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
RBFOX1-220ENST00000570188 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
RBFOX1-220ENST00000570188 NALCNQ8IZF0 1738 aa13.2□□□□□ -0.3
RBFOX1-220ENST00000570188 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
RBFOX1-220ENST00000570188 CDK19Q9BWU1 502 aa13.2□□□□□ -0.3
RBFOX1-220ENST00000570188 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
RBFOX1-220ENST00000570188 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
RBFOX1-220ENST00000570188 MON2Q7Z3U7 1717 aa13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 MYBBP1AQ9BQG0 1328 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 SLC12A5Q9H2X9 1139 aa13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 RGPD8O14715 1765 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
RBFOX1-220ENST00000570188 KDM4FA0A1W2PPD8 638 aa13.18□□□□□ -0.3
RBFOX1-220ENST00000570188 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
RBFOX1-220ENST00000570188 MS4A3Q96HJ5 214 aa13.18□□□□□ -0.3
RBFOX1-220ENST00000570188 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
RBFOX1-220ENST00000570188 FMN2Q9NZ56 1722 aa13.18□□□□□ -0.3
RBFOX1-220ENST00000570188 ATP7BP35670 1465 aa13.17□□□□□ -0.3
RBFOX1-220ENST00000570188 CDC42BPGQ6DT37 1551 aa13.17□□□□□ -0.3
RBFOX1-220ENST00000570188 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
RBFOX1-220ENST00000570188 SEMA3EO15041 775 aa13.17□□□□□ -0.3
RBFOX1-220ENST00000570188 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
RBFOX1-220ENST00000570188 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
RBFOX1-220ENST00000570188 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-220ENST00000570188 MFSD10Q14728 455 aa13.16□□□□□ -0.3
RBFOX1-220ENST00000570188 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
RBFOX1-220ENST00000570188 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
RBFOX1-220ENST00000570188 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-220ENST00000570188 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
RBFOX1-220ENST00000570188 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
RBFOX1-220ENST00000570188 LMTK3Q96Q04 1460 aa13.15□□□□□ -0.3
RBFOX1-220ENST00000570188 STRCQ7RTU9 1775 aa13.15□□□□□ -0.31
RBFOX1-220ENST00000570188 PPIP5K1Q6PFW1 1433 aa13.14□□□□□ -0.31
RBFOX1-220ENST00000570188 PDE4AP27815 886 aa13.14□□□□□ -0.31
RBFOX1-220ENST00000570188 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms