RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 PHF23Q9BUL5 403 aaPredicted RBP12.24□□□□□ -0.45
EDC3-218ENST00000570138 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
EDC3-218ENST00000570138 NCOA3Q9Y6Q9 1424 aa12.23□□□□□ -0.45
EDC3-218ENST00000570138 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
EDC3-218ENST00000570138 ESCO1Q5FWF5 840 aa12.23□□□□□ -0.45
EDC3-218ENST00000570138 COG3Q96JB2 828 aa12.23□□□□□ -0.45
EDC3-218ENST00000570138 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
EDC3-218ENST00000570138 USP6P35125 1406 aa12.22□□□□□ -0.45
EDC3-218ENST00000570138 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
EDC3-218ENST00000570138 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
EDC3-218ENST00000570138 INSRP06213 1382 aa12.21□□□□□ -0.45
EDC3-218ENST00000570138 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.45
EDC3-218ENST00000570138 ZNF335Q9H4Z2 1342 aaPredicted RBP12.21□□□□□ -0.45
EDC3-218ENST00000570138 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
EDC3-218ENST00000570138 ATF3P18847 181 aa12.21□□□□□ -0.45
EDC3-218ENST00000570138 FBLN1P23142 703 aa12.21□□□□□ -0.45
EDC3-218ENST00000570138 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
EDC3-218ENST00000570138 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
EDC3-218ENST00000570138 ZBED9Q6R2W3 1325 aa12.19□□□□□ -0.46
EDC3-218ENST00000570138 SENP3-EIF4A1A0A087X0R7 540 aa12.19□□□□□ -0.46
EDC3-218ENST00000570138 PSME1Q06323 249 aa12.19□□□□□ -0.46
EDC3-218ENST00000570138 FMN2Q9NZ56 1722 aa12.19□□□□□ -0.46
EDC3-218ENST00000570138 TOPAZ1Q8N9V7 1692 aa12.19□□□□□ -0.46
EDC3-218ENST00000570138 NALCNQ8IZF0 1738 aa12.18□□□□□ -0.46
EDC3-218ENST00000570138 CADPS2Q86UW7 1296 aa12.18□□□□□ -0.46
EDC3-218ENST00000570138 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
EDC3-218ENST00000570138 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
EDC3-218ENST00000570138 C1orf167Q5SNV9 1468 aa12.17□□□□□ -0.46
EDC3-218ENST00000570138 FOXO3O43524 673 aa12.17□□□□□ -0.46
EDC3-218ENST00000570138 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
EDC3-218ENST00000570138 PAK3O75914 559 aaPredicted RBP12.16□□□□□ -0.46
EDC3-218ENST00000570138 NLRP6P59044 892 aa12.16□□□□□ -0.46
EDC3-218ENST00000570138 KRT28Q7Z3Y7 464 aa12.16□□□□□ -0.46
EDC3-218ENST00000570138 NUDCQ9Y266 331 aa12.16□□□□□ -0.46
EDC3-218ENST00000570138 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
EDC3-218ENST00000570138 MSH6P52701 1360 aa12.16□□□□□ -0.46
EDC3-218ENST00000570138 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
EDC3-218ENST00000570138 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 MON2Q7Z3U7 1717 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 DCCP43146 1447 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
EDC3-218ENST00000570138 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
EDC3-218ENST00000570138 RRS1Q15050 365 aaKnown RBP12.15□□□□□ -0.46
EDC3-218ENST00000570138 NUTM2GQ5VZR2 741 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 CCDC146Q8IYE0 955 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 ABTB2Q8N961 1025 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
EDC3-218ENST00000570138 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.46
EDC3-218ENST00000570138 OVOS2A0A0J9YW53 1432 aa12.14□□□□□ -0.47
EDC3-218ENST00000570138 MST1RQ04912 1400 aa12.14□□□□□ -0.47
EDC3-218ENST00000570138 OVOS2Q6IE36 1432 aa12.14□□□□□ -0.47
EDC3-218ENST00000570138 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
EDC3-218ENST00000570138 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
EDC3-218ENST00000570138 XPCQ01831 940 aaPredicted RBP12.13□□□□□ -0.47
EDC3-218ENST00000570138 ITSN1Q15811 1721 aa12.13□□□□□ -0.47
EDC3-218ENST00000570138 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
EDC3-218ENST00000570138 APAF1O14727 1248 aa12.12□□□□□ -0.47
EDC3-218ENST00000570138 U2SURPO15042 1029 aaKnown RBP12.12□□□□□ -0.47
EDC3-218ENST00000570138 SOX12O15370 315 aa12.12□□□□□ -0.47
EDC3-218ENST00000570138 IL13P35225 146 aa12.12□□□□□ -0.47
EDC3-218ENST00000570138 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
EDC3-218ENST00000570138 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
EDC3-218ENST00000570138 COL3A1P02461 1466 aaPredicted RBP12.11□□□□□ -0.47
EDC3-218ENST00000570138 HSPA1LP34931 641 aa12.11□□□□□ -0.47
EDC3-218ENST00000570138 SLAIN2Q9P270 581 aa12.11□□□□□ -0.47
EDC3-218ENST00000570138 ANKRD26Q9UPS8 1709 aa12.11□□□□□ -0.47
EDC3-218ENST00000570138 NRKQ7Z2Y5 1582 aa12.1□□□□□ -0.47
EDC3-218ENST00000570138 PDE3BQ13370 1112 aa12.1□□□□□ -0.47
EDC3-218ENST00000570138 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
EDC3-218ENST00000570138 SMG6Q86US8 1419 aaKnown RBP12.1□□□□□ -0.47
EDC3-218ENST00000570138 MAP3K19Q56UN5 1328 aa12.1□□□□□ -0.47
EDC3-218ENST00000570138 BRINP3Q76B58 766 aa12.09□□□□□ -0.47
EDC3-218ENST00000570138 NGEFQ8N5V2 710 aa12.09□□□□□ -0.47
EDC3-218ENST00000570138 FCHSD2O94868 740 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 AMPHP49418 695 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 TCP11L2Q8N4U5 519 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 PLEKHF1Q96S99 279 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
EDC3-218ENST00000570138 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
EDC3-218ENST00000570138 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
EDC3-218ENST00000570138 CDK12Q9NYV4 1490 aaPredicted RBP12.07□□□□□ -0.48
EDC3-218ENST00000570138 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
EDC3-218ENST00000570138 KCNH5Q8NCM2 988 aa12.06□□□□□ -0.48
EDC3-218ENST00000570138 CDCA7LQ96GN5 454 aa12.06□□□□□ -0.48
EDC3-218ENST00000570138 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
EDC3-218ENST00000570138 ZNF521Q96K83 1311 aa12.06□□□□□ -0.48
EDC3-218ENST00000570138 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
EDC3-218ENST00000570138 GCP02774 474 aa12.05□□□□□ -0.48
EDC3-218ENST00000570138 HMOX1P09601 288 aa12.05□□□□□ -0.48
EDC3-218ENST00000570138 PIP4K2BP78356 416 aa12.05□□□□□ -0.48
EDC3-218ENST00000570138 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
EDC3-218ENST00000570138 SHPRHQ149N8 1683 aa12.05□□□□□ -0.48
EDC3-218ENST00000570138 PIK3C2AO00443 1686 aa12.04□□□□□ -0.48
EDC3-218ENST00000570138 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
EDC3-218ENST00000570138 HOXC9P31274 260 aa12.04□□□□□ -0.48
EDC3-218ENST00000570138 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms