RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 PXDNQ92626 1479 aa12.94□□□□□ -0.34
SNX29-208ENST00000569801 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
SNX29-208ENST00000569801 PROM2Q8N271 834 aa12.94□□□□□ -0.34
SNX29-208ENST00000569801 PTPN23Q9H3S7 1636 aa12.94□□□□□ -0.34
SNX29-208ENST00000569801 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
SNX29-208ENST00000569801 USP32Q8NFA0 1604 aa12.93□□□□□ -0.34
SNX29-208ENST00000569801 EIF2AK4Q9P2K8 1649 aaKnown RBP12.93□□□□□ -0.34
SNX29-208ENST00000569801 PDE3BQ13370 1112 aa12.93□□□□□ -0.34
SNX29-208ENST00000569801 NMRK2Q9NPI5 230 aa12.93□□□□□ -0.34
SNX29-208ENST00000569801 BTG4Q9NY30 223 aa12.93□□□□□ -0.34
SNX29-208ENST00000569801 CTCFP49711 727 aaPredicted RBP12.91□□□□□ -0.34
SNX29-208ENST00000569801 APLP2Q06481 763 aa12.91□□□□□ -0.34
SNX29-208ENST00000569801 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
SNX29-208ENST00000569801 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
SNX29-208ENST00000569801 THSD7AQ9UPZ6 1657 aa12.9□□□□□ -0.34
SNX29-208ENST00000569801 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
SNX29-208ENST00000569801 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
SNX29-208ENST00000569801 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
SNX29-208ENST00000569801 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNX29-208ENST00000569801 POLD1P28340 1107 aa12.88□□□□□ -0.35
SNX29-208ENST00000569801 CEP152O94986 1710 aa12.88□□□□□ -0.35
SNX29-208ENST00000569801 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
SNX29-208ENST00000569801 DAPK1P53355 1430 aa12.88□□□□□ -0.35
SNX29-208ENST00000569801 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
SNX29-208ENST00000569801 LBX1P52954 281 aa12.87□□□□□ -0.35
SNX29-208ENST00000569801 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
SNX29-208ENST00000569801 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
SNX29-208ENST00000569801 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
SNX29-208ENST00000569801 ERBINQ96RT1 1412 aa12.84□□□□□ -0.35
SNX29-208ENST00000569801 AIDAQ96BJ3 306 aa12.83□□□□□ -0.36
SNX29-208ENST00000569801 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
SNX29-208ENST00000569801 RRP7BPQ9NSQ0 103 aa12.82□□□□□ -0.36
SNX29-208ENST00000569801 SPATA31A1Q5TZJ5 1347 aa12.82□□□□□ -0.36
SNX29-208ENST00000569801 PTF1AQ7RTS3 328 aa12.81□□□□□ -0.36
SNX29-208ENST00000569801 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
SNX29-208ENST00000569801 TXNRD1Q16881 649 aa12.8□□□□□ -0.36
SNX29-208ENST00000569801 CHIC2Q9UKJ5 165 aa12.79□□□□□ -0.36
SNX29-208ENST00000569801 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
SNX29-208ENST00000569801 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
SNX29-208ENST00000569801 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
SNX29-208ENST00000569801 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
SNX29-208ENST00000569801 NALCNQ8IZF0 1738 aa12.77□□□□□ -0.36
SNX29-208ENST00000569801 XRN1Q8IZH2 1706 aaKnown RBP12.77□□□□□ -0.36
SNX29-208ENST00000569801 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
SNX29-208ENST00000569801 SLC17A8Q8NDX2 589 aa12.77□□□□□ -0.37
SNX29-208ENST00000569801 HABP4Q5JVS0 413 aaKnown RBP12.76□□□□□ -0.37
SNX29-208ENST00000569801 LMTK2Q8IWU2 1503 aa12.76□□□□□ -0.37
SNX29-208ENST00000569801 NRAPQ86VF7 1730 aa12.76□□□□□ -0.37
SNX29-208ENST00000569801 ARHGEF28Q8N1W1 1705 aaKnown RBP12.76□□□□□ -0.37
SNX29-208ENST00000569801 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
SNX29-208ENST00000569801 METP08581 1390 aa12.75□□□□□ -0.37
SNX29-208ENST00000569801 FAM50AQ14320 339 aaKnown RBP12.75□□□□□ -0.37
SNX29-208ENST00000569801 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
SNX29-208ENST00000569801 GCC1Q96CN9 775 aa12.75□□□□□ -0.37
SNX29-208ENST00000569801 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
SNX29-208ENST00000569801 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
SNX29-208ENST00000569801 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
SNX29-208ENST00000569801 SLC16A10Q8TF71 515 aa12.74□□□□□ -0.37
SNX29-208ENST00000569801 RRBP1Q9P2E9 1410 aaKnown RBP12.73□□□□□ -0.37
SNX29-208ENST00000569801 KANK1Q14678 1352 aa12.73□□□□□ -0.37
SNX29-208ENST00000569801 HSPA8P11142 646 aaKnown RBP12.73□□□□□ -0.37
SNX29-208ENST00000569801 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
SNX29-208ENST00000569801 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
SNX29-208ENST00000569801 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.38
SNX29-208ENST00000569801 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.38
SNX29-208ENST00000569801 TECPR2O15040 1411 aa12.71□□□□□ -0.38
SNX29-208ENST00000569801 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
SNX29-208ENST00000569801 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
SNX29-208ENST00000569801 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
SNX29-208ENST00000569801 TNS3Q68CZ2 1445 aa12.68□□□□□ -0.38
SNX29-208ENST00000569801 ZNF827Q17R98 1081 aa12.67□□□□□ -0.38
SNX29-208ENST00000569801 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
SNX29-208ENST00000569801 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
SNX29-208ENST00000569801 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
SNX29-208ENST00000569801 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
SNX29-208ENST00000569801 ROCK1Q13464 1354 aa12.66□□□□□ -0.38
SNX29-208ENST00000569801 OVOS2A0A0G2JMS6 1433 aa12.64□□□□□ -0.39
SNX29-208ENST00000569801 OVOS2A0A0J9YW53 1432 aa12.64□□□□□ -0.39
SNX29-208ENST00000569801 OVOS2Q6IE36 1432 aa12.64□□□□□ -0.39
SNX29-208ENST00000569801 FXR1P51114 621 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNX29-208ENST00000569801 PSME1Q06323 249 aa12.64□□□□□ -0.39
SNX29-208ENST00000569801 CD2APQ9Y5K6 639 aa12.64□□□□□ -0.39
SNX29-208ENST00000569801 A0A0C4DFX4 3053 aa12.64□□□□□ -0.39
SNX29-208ENST00000569801 E9PCH4 1651 aa12.64□□□□□ -0.39
SNX29-208ENST00000569801 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
SNX29-208ENST00000569801 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
SNX29-208ENST00000569801 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
SNX29-208ENST00000569801 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
SNX29-208ENST00000569801 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
SNX29-208ENST00000569801 MCOLN1Q9GZU1 580 aa12.61□□□□□ -0.39
SNX29-208ENST00000569801 PRDM11Q9NQV5 511 aa12.61□□□□□ -0.39
SNX29-208ENST00000569801 ITGAEP38570 1179 aa12.6□□□□□ -0.39
SNX29-208ENST00000569801 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
SNX29-208ENST00000569801 C10orf71Q711Q0 1435 aa12.6□□□□□ -0.39
SNX29-208ENST00000569801 KDM2BQ8NHM5 1336 aa12.6□□□□□ -0.39
SNX29-208ENST00000569801 COL14A1Q05707 1796 aaKnown RBP12.59□□□□□ -0.39
SNX29-208ENST00000569801 SOX10P56693 466 aa12.59□□□□□ -0.39
SNX29-208ENST00000569801 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
SNX29-208ENST00000569801 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
SNX29-208ENST00000569801 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms