RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 FANCAO15360 1455 aa12.4□□□□□ -0.42
CCDC113-205ENST00000569374 BCORL1Q5H9F3 1711 aa12.4□□□□□ -0.42
CCDC113-205ENST00000569374 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.42
CCDC113-205ENST00000569374 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
CCDC113-205ENST00000569374 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
CCDC113-205ENST00000569374 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
CCDC113-205ENST00000569374 HECW2Q9P2P5 1572 aa12.39□□□□□ -0.43
CCDC113-205ENST00000569374 FMN1Q68DA7 1419 aa12.39□□□□□ -0.43
CCDC113-205ENST00000569374 LILRB3O75022 631 aa12.39□□□□□ -0.43
CCDC113-205ENST00000569374 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
CCDC113-205ENST00000569374 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
CCDC113-205ENST00000569374 MTMR14Q8NCE2 650 aa12.38□□□□□ -0.43
CCDC113-205ENST00000569374 ZMYM4Q5VZL5 1548 aa12.37□□□□□ -0.43
CCDC113-205ENST00000569374 POTEB2H3BUK9 544 aa12.37□□□□□ -0.43
CCDC113-205ENST00000569374 AP1G2O75843 785 aa12.37□□□□□ -0.43
CCDC113-205ENST00000569374 ZBTB3Q9H5J0 574 aa12.37□□□□□ -0.43
CCDC113-205ENST00000569374 RIMS1Q86UR5 1692 aaKnown RBP12.37□□□□□ -0.43
CCDC113-205ENST00000569374 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
CCDC113-205ENST00000569374 NDUFV2P19404 249 aa12.36□□□□□ -0.43
CCDC113-205ENST00000569374 QPCTQ16769 361 aa12.36□□□□□ -0.43
CCDC113-205ENST00000569374 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
CCDC113-205ENST00000569374 AKNAQ7Z591 1439 aa12.36□□□□□ -0.43
CCDC113-205ENST00000569374 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
CCDC113-205ENST00000569374 C3orf80F5H4A9 247 aa12.35□□□□□ -0.43
CCDC113-205ENST00000569374 GCGRP47871 477 aa12.35□□□□□ -0.43
CCDC113-205ENST00000569374 PROX2Q3B8N5 592 aa12.35□□□□□ -0.43
CCDC113-205ENST00000569374 GDPD2Q9HCC8 539 aa12.35□□□□□ -0.43
CCDC113-205ENST00000569374 CLIP1P30622 1438 aa12.35□□□□□ -0.43
CCDC113-205ENST00000569374 SMAPO00193 183 aa12.34□□□□□ -0.43
CCDC113-205ENST00000569374 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
CCDC113-205ENST00000569374 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
CCDC113-205ENST00000569374 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
CCDC113-205ENST00000569374 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
CCDC113-205ENST00000569374 CASKIN1Q8WXD9 1431 aa12.34□□□□□ -0.43
CCDC113-205ENST00000569374 ZFYVE16Q7Z3T8 1539 aa12.33□□□□□ -0.44
CCDC113-205ENST00000569374 PLEKHD1A6NEE1 506 aa12.33□□□□□ -0.44
CCDC113-205ENST00000569374 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
CCDC113-205ENST00000569374 POGZQ7Z3K3 1410 aa12.33□□□□□ -0.44
CCDC113-205ENST00000569374 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
CCDC113-205ENST00000569374 FYCO1Q9BQS8 1478 aa12.33□□□□□ -0.44
CCDC113-205ENST00000569374 ABCA6Q8N139 1617 aa12.33□□□□□ -0.44
CCDC113-205ENST00000569374 ZBTB7CA1YPR0 619 aa12.32□□□□□ -0.44
CCDC113-205ENST00000569374 HOXA2O43364 376 aa12.32□□□□□ -0.44
CCDC113-205ENST00000569374 FDX1P10109 184 aa12.32□□□□□ -0.44
CCDC113-205ENST00000569374 ABL2P42684 1182 aa12.32□□□□□ -0.44
CCDC113-205ENST00000569374 FER1L4A9Z1Z3 1794 aa12.32□□□□□ -0.44
CCDC113-205ENST00000569374 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
CCDC113-205ENST00000569374 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
CCDC113-205ENST00000569374 PLCH2O75038 1416 aa12.31□□□□□ -0.44
CCDC113-205ENST00000569374 USP17L8P0C7I0 530 aa12.31□□□□□ -0.44
CCDC113-205ENST00000569374 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
CCDC113-205ENST00000569374 ZBED2Q9BTP6 218 aa12.31□□□□□ -0.44
CCDC113-205ENST00000569374 RABGEF1Q9UJ41 708 aa12.31□□□□□ -0.44
CCDC113-205ENST00000569374 ABCC1P33527 1531 aa12.31□□□□□ -0.44
CCDC113-205ENST00000569374 SAMD9LQ8IVG5 1584 aa12.3□□□□□ -0.44
CCDC113-205ENST00000569374 RTL5Q5HYW3 569 aaPredicted RBP12.3□□□□□ -0.44
CCDC113-205ENST00000569374 KDM5CP41229 1560 aa12.3□□□□□ -0.44
CCDC113-205ENST00000569374 DIP2CQ9Y2E4 1556 aa12.3□□□□□ -0.44
CCDC113-205ENST00000569374 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
CCDC113-205ENST00000569374 HRCP23327 699 aa12.29□□□□□ -0.44
CCDC113-205ENST00000569374 NDUFB9Q9Y6M9 179 aa12.29□□□□□ -0.44
CCDC113-205ENST00000569374 SCAPERQ9BY12 1400 aa12.28□□□□□ -0.44
CCDC113-205ENST00000569374 PTPRMP28827 1452 aa12.28□□□□□ -0.44
CCDC113-205ENST00000569374 HELBQ8NG08 1087 aaPredicted RBP12.28□□□□□ -0.44
CCDC113-205ENST00000569374 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
CCDC113-205ENST00000569374 CALR3Q96L12 384 aaKnown RBP12.28□□□□□ -0.44
CCDC113-205ENST00000569374 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
CCDC113-205ENST00000569374 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
CCDC113-205ENST00000569374 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.45
CCDC113-205ENST00000569374 KIDINS220Q9ULH0 1771 aa12.27□□□□□ -0.45
CCDC113-205ENST00000569374 ARHGAP33O14559 1287 aa12.26□□□□□ -0.45
CCDC113-205ENST00000569374 SLF2Q8IX21 1173 aa12.26□□□□□ -0.45
CCDC113-205ENST00000569374 TBC1D2BQ9UPU7 963 aa12.26□□□□□ -0.45
CCDC113-205ENST00000569374 PHLDB1Q86UU1 1377 aa12.26□□□□□ -0.45
CCDC113-205ENST00000569374 SYCP2Q9BX26 1530 aa12.26□□□□□ -0.45
CCDC113-205ENST00000569374 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
CCDC113-205ENST00000569374 MTMR2Q13614 643 aa12.25□□□□□ -0.45
CCDC113-205ENST00000569374 PPP1R15AO75807 674 aaPredicted RBP12.24□□□□□ -0.45
CCDC113-205ENST00000569374 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
CCDC113-205ENST00000569374 WASHC4Q2M389 1173 aa12.24□□□□□ -0.45
CCDC113-205ENST00000569374 TRAPPC8Q9Y2L5 1435 aa12.24□□□□□ -0.45
CCDC113-205ENST00000569374 SLC10A3P09131 477 aa12.23□□□□□ -0.45
CCDC113-205ENST00000569374 PBX2P40425 430 aa12.22□□□□□ -0.45
CCDC113-205ENST00000569374 NECTIN2Q92692 538 aa12.22□□□□□ -0.45
CCDC113-205ENST00000569374 GLMNQ92990 594 aa12.22□□□□□ -0.45
CCDC113-205ENST00000569374 ERBB3P21860 1342 aa12.21□□□□□ -0.45
CCDC113-205ENST00000569374 PSEN2P49810 448 aa12.21□□□□□ -0.45
CCDC113-205ENST00000569374 PDE4CQ08493 712 aa12.21□□□□□ -0.45
CCDC113-205ENST00000569374 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
CCDC113-205ENST00000569374 INO80Q9ULG1 1556 aaPredicted RBP12.21□□□□□ -0.46
CCDC113-205ENST00000569374 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.46
CCDC113-205ENST00000569374 ZNF518AQ6AHZ1 1483 aa12.21□□□□□ -0.46
CCDC113-205ENST00000569374 LMTK3Q96Q04 1460 aa12.21□□□□□ -0.46
CCDC113-205ENST00000569374 ACIN1Q9UKV3 1341 aaKnown RBP12.2□□□□□ -0.46
CCDC113-205ENST00000569374 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
CCDC113-205ENST00000569374 LAPTM4BQ86VI4 370 aa12.2□□□□□ -0.46
CCDC113-205ENST00000569374 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
CCDC113-205ENST00000569374 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
CCDC113-205ENST00000569374 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
CCDC113-205ENST00000569374 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms