RNA–Protein interactions for RNA: ENST00000569348.5

NAE1-220, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 4

Gene NAE1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-220ENST00000569348 KIAA1210Q9ULL0 1709 aa28.52■■■□□ 2.16
NAE1-220ENST00000569348 NWD2Q9ULI1 1742 aa28.5■■■□□ 2.15
NAE1-220ENST00000569348 SEPT12Q8IYM1 358 aa28.5■■■□□ 2.15
NAE1-220ENST00000569348 BTG4Q9NY30 223 aa28.49■■■□□ 2.15
NAE1-220ENST00000569348 BRWD3Q6RI45 1802 aa28.48■■■□□ 2.15
NAE1-220ENST00000569348 NUTM2GQ5VZR2 741 aa28.48■■■□□ 2.15
NAE1-220ENST00000569348 ITSN1Q15811 1721 aa28.48■■■□□ 2.15
NAE1-220ENST00000569348 ACEP12821 1306 aa28.45■■■□□ 2.15
NAE1-220ENST00000569348 CRYBG1Q9Y4K1 1723 aa28.44■■■□□ 2.14
NAE1-220ENST00000569348 NRAPQ86VF7 1730 aa28.43■■■□□ 2.14
NAE1-220ENST00000569348 TOPAZ1Q8N9V7 1692 aa28.43■■■□□ 2.14
NAE1-220ENST00000569348 TONSLQ96HA7 1378 aa28.43■■■□□ 2.14
NAE1-220ENST00000569348 CCER1Q8TC90 406 aaPredicted RBP28.43■■■□□ 2.14
NAE1-220ENST00000569348 CCDC61Q9Y6R9 512 aa28.43■■■□□ 2.14
NAE1-220ENST00000569348 CENPJQ9HC77 1338 aaPredicted RBP28.43■■■□□ 2.14
NAE1-220ENST00000569348 A0A0G2JS52 829 aa28.42■■■□□ 2.14
NAE1-220ENST00000569348 MYT1Q01538 1121 aa28.42■■■□□ 2.14
NAE1-220ENST00000569348 NBPF8Q3BBV2 869 aa28.42■■■□□ 2.14
NAE1-220ENST00000569348 COL14A1Q05707 1796 aaKnown RBP28.42■■■□□ 2.14
NAE1-220ENST00000569348 SRPK2P78362 688 aaKnown RBP28.41■■■□□ 2.14
NAE1-220ENST00000569348 FAM98CQ17RN3 349 aaKnown RBP28.41■■■□□ 2.14
NAE1-220ENST00000569348 CABP2Q9NPB3 220 aa28.41■■■□□ 2.14
NAE1-220ENST00000569348 PRDM11Q9NQV5 511 aa28.41■■■□□ 2.14
NAE1-220ENST00000569348 SRCAPQ6ZRS2 3230 aa28.41■■■□□ 2.14
NAE1-220ENST00000569348 ONECUT3O60422 494 aaPredicted RBP28.4■■■□□ 2.14
NAE1-220ENST00000569348 CHRNA2Q15822 529 aa28.4■■■□□ 2.14
NAE1-220ENST00000569348 POLR3AO14802 1390 aaPredicted RBP28.39■■■□□ 2.14
NAE1-220ENST00000569348 PLEKHG3A1L390 1219 aa28.39■■■□□ 2.14
NAE1-220ENST00000569348 ZC3H6P61129 1189 aaKnown RBP28.38■■■□□ 2.13
NAE1-220ENST00000569348 KIAA0232Q92628 1395 aa28.37■■■□□ 2.13
NAE1-220ENST00000569348 KRT27Q7Z3Y8 459 aa28.37■■■□□ 2.13
NAE1-220ENST00000569348 CCDC125Q86Z20 511 aa28.37■■■□□ 2.13
NAE1-220ENST00000569348 TIMELESSQ9UNS1 1208 aa28.37■■■□□ 2.13
NAE1-220ENST00000569348 DEFB132Q7Z7B7 95 aa28.36■■■□□ 2.13
NAE1-220ENST00000569348 PPIP5K1Q6PFW1 1433 aa28.35■■■□□ 2.13
NAE1-220ENST00000569348 PHRF1Q9P1Y6 1649 aaKnown RBP28.35■■■□□ 2.13
NAE1-220ENST00000569348 QRICH2Q9H0J4 1663 aa28.35■■■□□ 2.13
NAE1-220ENST00000569348 BLMP54132 1417 aaPredicted RBP28.35■■■□□ 2.13
NAE1-220ENST00000569348 SPATA31A5Q5VU36 1347 aa28.33■■■□□ 2.13
NAE1-220ENST00000569348 SPATA31A7Q8IWB4 1347 aa28.33■■■□□ 2.13
NAE1-220ENST00000569348 FAM182BQ5T319 152 aa28.32■■■□□ 2.12
NAE1-220ENST00000569348 ABTB2Q8N961 1025 aa28.32■■■□□ 2.12
NAE1-220ENST00000569348 STRN4Q9NRL3 753 aa28.32■■■□□ 2.12
NAE1-220ENST00000569348 TRPM1Q7Z4N2 1603 aa28.3■■■□□ 2.12
NAE1-220ENST00000569348 ZRANB1Q9UGI0 708 aa28.3■■■□□ 2.12
NAE1-220ENST00000569348 CABP1Q9NZU7 370 aa28.29■■■□□ 2.12
NAE1-220ENST00000569348 ROCK2O75116 1388 aaKnown RBP28.26■■■□□ 2.12
NAE1-220ENST00000569348 SF3B2Q13435 895 aaKnown RBP28.26■■■□□ 2.11
NAE1-220ENST00000569348 NRKQ7Z2Y5 1582 aa28.25■■■□□ 2.11
NAE1-220ENST00000569348 USP35Q9P2H5 1018 aa28.24■■■□□ 2.11
NAE1-220ENST00000569348 SPATA31A1Q5TZJ5 1347 aa28.23■■■□□ 2.11
NAE1-220ENST00000569348 USP19O94966 1318 aa28.22■■■□□ 2.11
NAE1-220ENST00000569348 EVC2Q86UK5 1308 aa28.2■■■□□ 2.11
NAE1-220ENST00000569348 THSD7AQ9UPZ6 1657 aa28.2■■■□□ 2.11
NAE1-220ENST00000569348 ZBTB7CA1YPR0 619 aa28.2■■■□□ 2.1
NAE1-220ENST00000569348 EVA1CP58658 441 aa28.2■■■□□ 2.1
NAE1-220ENST00000569348 NLRP13Q86W25 1043 aa28.2■■■□□ 2.1
NAE1-220ENST00000569348 CAMTA1Q9Y6Y1 1673 aa28.19■■■□□ 2.1
NAE1-220ENST00000569348 USP6P35125 1406 aa28.19■■■□□ 2.1
NAE1-220ENST00000569348 GCP02774 474 aa28.19■■■□□ 2.1
NAE1-220ENST00000569348 LARP1Q6PKG0 1096 aaKnown RBP28.19■■■□□ 2.1
NAE1-220ENST00000569348 SSH2Q76I76 1423 aa28.18■■■□□ 2.1
NAE1-220ENST00000569348 NLRP6P59044 892 aa28.17■■■□□ 2.1
NAE1-220ENST00000569348 CPDO75976 1380 aa28.15■■■□□ 2.1
NAE1-220ENST00000569348 LMO7Q8WWI1 1683 aa28.14■■■□□ 2.1
NAE1-220ENST00000569348 BAG6P46379 1132 aa28.13■■■□□ 2.09
NAE1-220ENST00000569348 EN1Q05925 392 aaPredicted RBP28.12■■■□□ 2.09
NAE1-220ENST00000569348 BRD4O60885 1362 aaPredicted RBP28.11■■■□□ 2.09
NAE1-220ENST00000569348 PIK3C2AO00443 1686 aa28.1■■■□□ 2.09
NAE1-220ENST00000569348 CARD11Q9BXL7 1154 aa28.08■■■□□ 2.09
NAE1-220ENST00000569348 COL5A2P05997 1499 aaPredicted RBP28.08■■■□□ 2.09
NAE1-220ENST00000569348 PSDA5PKW4 1024 aaPredicted RBP28.07■■■□□ 2.08
NAE1-220ENST00000569348 SOX12O15370 315 aa28.07■■■□□ 2.08
NAE1-220ENST00000569348 TRIM37O94972 964 aa28.07■■■□□ 2.08
NAE1-220ENST00000569348 BARGINQ6ZT62 677 aa28.07■■■□□ 2.08
NAE1-220ENST00000569348 TCP11L2Q8N4U5 519 aa28.07■■■□□ 2.08
NAE1-220ENST00000569348 TTC21BQ7Z4L5 1316 aa28.07■■■□□ 2.08
NAE1-220ENST00000569348 SLIT3O75094 1523 aa28.07■■■□□ 2.08
NAE1-220ENST00000569348 RGPD1P0DJD0 1748 aa28.06■■■□□ 2.08
NAE1-220ENST00000569348 TNS1Q9HBL0 1735 aaKnown RBP28.04■■■□□ 2.08
NAE1-220ENST00000569348 PDE3BQ13370 1112 aa28.03■■■□□ 2.08
NAE1-220ENST00000569348 FAM196AQ6ZSG2 479 aa28.03■■■□□ 2.08
NAE1-220ENST00000569348 AKAP12Q02952 1782 aa28.03■■■□□ 2.08
NAE1-220ENST00000569348 EZH2Q15910 746 aaKnown RBP28.02■■■□□ 2.08
NAE1-220ENST00000569348 ZNF692Q9BU19 519 aaPredicted RBP28.02■■■□□ 2.08
NAE1-220ENST00000569348 AXIN2Q9Y2T1 843 aa28.02■■■□□ 2.08
NAE1-220ENST00000569348 AATKQ6ZMQ8 1374 aa28.01■■■□□ 2.07
NAE1-220ENST00000569348 KTN1Q86UP2 1357 aaKnown RBP28.01■■■□□ 2.07
NAE1-220ENST00000569348 CPSF1Q10570 1443 aaKnown RBP28■■■□□ 2.07
NAE1-220ENST00000569348 CRB1P82279 1406 aa27.99■■■□□ 2.07
NAE1-220ENST00000569348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.98■■■□□ 2.07
NAE1-220ENST00000569348 THRAP3Q9Y2W1 955 aaKnown RBP27.98■■■□□ 2.07
NAE1-220ENST00000569348 COL18A1P39060 1754 aa27.98■■■□□ 2.07
NAE1-220ENST00000569348 APBA3O96018 575 aa27.97■■■□□ 2.07
NAE1-220ENST00000569348 TOM1L2Q6ZVM7 507 aa27.97■■■□□ 2.07
NAE1-220ENST00000569348 TMC1Q8TDI8 760 aa27.97■■■□□ 2.07
NAE1-220ENST00000569348 SBNO2Q9Y2G9 1366 aa27.97■■■□□ 2.07
NAE1-220ENST00000569348 TTC21AQ8NDW8 1320 aa27.96■■■□□ 2.07
NAE1-220ENST00000569348 ARHGEF25Q86VW2 580 aa27.96■■■□□ 2.07
NAE1-220ENST00000569348 DISP2A7MBM2 1401 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms