RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 MPNDQ8N594 471 aa9.8□□□□□ -0.84
UBR1-209ENST00000569243 ZFAND3Q9H8U3 227 aa9.8□□□□□ -0.84
UBR1-209ENST00000569243 ZIC2O95409 532 aaPredicted RBP9.79□□□□□ -0.84
UBR1-209ENST00000569243 MS4A1P11836 297 aa9.79□□□□□ -0.84
UBR1-209ENST00000569243 BMP2P12643 396 aa9.78□□□□□ -0.84
UBR1-209ENST00000569243 P3H3Q8IVL6 736 aa9.78□□□□□ -0.84
UBR1-209ENST00000569243 ZNF511Q8NB15 262 aa9.78□□□□□ -0.84
UBR1-209ENST00000569243 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
UBR1-209ENST00000569243 TESPA1A2RU30 521 aaPredicted RBP9.77□□□□□ -0.85
UBR1-209ENST00000569243 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
UBR1-209ENST00000569243 FOXK2Q01167 660 aa9.77□□□□□ -0.85
UBR1-209ENST00000569243 ITPKCQ96DU7 683 aa9.77□□□□□ -0.85
UBR1-209ENST00000569243 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
UBR1-209ENST00000569243 WHAMMQ8TF30 809 aa9.76□□□□□ -0.85
UBR1-209ENST00000569243 DNMT3LQ9UJW3 386 aa9.76□□□□□ -0.85
UBR1-209ENST00000569243 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
UBR1-209ENST00000569243 EVA1BQ9NVM1 165 aa9.75□□□□□ -0.85
UBR1-209ENST00000569243 UPP2O95045 317 aa9.74□□□□□ -0.85
UBR1-209ENST00000569243 ARID5BQ14865 1188 aa9.74□□□□□ -0.85
UBR1-209ENST00000569243 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
UBR1-209ENST00000569243 KRTAP4-8Q9BYQ9 185 aa9.74□□□□□ -0.85
UBR1-209ENST00000569243 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
UBR1-209ENST00000569243 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
UBR1-209ENST00000569243 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
UBR1-209ENST00000569243 PTPRNQ16849 979 aa9.73□□□□□ -0.85
UBR1-209ENST00000569243 RNFT1Q5M7Z0 435 aa9.73□□□□□ -0.85
UBR1-209ENST00000569243 SOS2Q07890 1332 aaPredicted RBP9.73□□□□□ -0.85
UBR1-209ENST00000569243 ARHGEF15O94989 841 aa9.72□□□□□ -0.85
UBR1-209ENST00000569243 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
UBR1-209ENST00000569243 FAM174AQ8TBP5 190 aa9.72□□□□□ -0.85
UBR1-209ENST00000569243 ADAM23O75077 832 aa9.71□□□□□ -0.86
UBR1-209ENST00000569243 NR3C2P08235 984 aa9.7□□□□□ -0.86
UBR1-209ENST00000569243 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
UBR1-209ENST00000569243 FDX1P10109 184 aa9.69□□□□□ -0.86
UBR1-209ENST00000569243 NUTM1Q86Y26 1132 aa9.69□□□□□ -0.86
UBR1-209ENST00000569243 SCARF2Q96GP6 870 aaPredicted RBP9.69□□□□□ -0.86
UBR1-209ENST00000569243 CDK15Q96Q40 435 aa9.69□□□□□ -0.86
UBR1-209ENST00000569243 PTSQ03393 145 aa9.68□□□□□ -0.86
UBR1-209ENST00000569243 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
UBR1-209ENST00000569243 MEIOBQ8N635 442 aa9.68□□□□□ -0.86
UBR1-209ENST00000569243 SLURP2P0DP57 97 aa9.67□□□□□ -0.86
UBR1-209ENST00000569243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.67□□□□□ -0.86
UBR1-209ENST00000569243 NANOS1Q8WY41 292 aaKnown RBP9.67□□□□□ -0.86
UBR1-209ENST00000569243 MSTNO14793 375 aa9.66□□□□□ -0.86
UBR1-209ENST00000569243 NR5A1Q13285 461 aa9.66□□□□□ -0.86
UBR1-209ENST00000569243 FOXJ1Q92949 421 aa9.65□□□□□ -0.86
UBR1-209ENST00000569243 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
UBR1-209ENST00000569243 SPTLC1O15269 473 aa9.63□□□□□ -0.87
UBR1-209ENST00000569243 GRM5P41594 1212 aa9.63□□□□□ -0.87
UBR1-209ENST00000569243 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
UBR1-209ENST00000569243 CCDC155Q8N6L0 562 aa9.63□□□□□ -0.87
UBR1-209ENST00000569243 PRR7Q8TB68 274 aa9.63□□□□□ -0.87
UBR1-209ENST00000569243 TTLL8A6PVC2 850 aa9.62□□□□□ -0.87
UBR1-209ENST00000569243 CTHP32929 405 aa9.62□□□□□ -0.87
UBR1-209ENST00000569243 MAP2K5Q13163 448 aa9.62□□□□□ -0.87
UBR1-209ENST00000569243 VWA5B2Q8N398 1253 aa9.62□□□□□ -0.87
UBR1-209ENST00000569243 SPOCK3Q9BQ16 436 aa9.62□□□□□ -0.87
UBR1-209ENST00000569243 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
UBR1-209ENST00000569243 TSEN34Q9BSV6 310 aaKnown RBP9.61□□□□□ -0.87
UBR1-209ENST00000569243 CDC14CA4D256 554 aa9.6□□□□□ -0.87
UBR1-209ENST00000569243 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.6□□□□□ -0.87
UBR1-209ENST00000569243 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
UBR1-209ENST00000569243 AGERQ15109 404 aa9.59□□□□□ -0.87
UBR1-209ENST00000569243 LYPD4Q6UWN0 246 aa9.59□□□□□ -0.87
UBR1-209ENST00000569243 KRTAP9-2Q9BYQ4 174 aa9.59□□□□□ -0.87
UBR1-209ENST00000569243 IRF6O14896 467 aa9.58□□□□□ -0.88
UBR1-209ENST00000569243 ADAMTS2O95450 1211 aa9.57□□□□□ -0.88
UBR1-209ENST00000569243 NDUFV2P19404 249 aa9.57□□□□□ -0.88
UBR1-209ENST00000569243 MAP3K10Q02779 954 aa9.57□□□□□ -0.88
UBR1-209ENST00000569243 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
UBR1-209ENST00000569243 SV2AQ7L0J3 742 aa9.57□□□□□ -0.88
UBR1-209ENST00000569243 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
UBR1-209ENST00000569243 ITGB2P05107 769 aa9.56□□□□□ -0.88
UBR1-209ENST00000569243 ITGA6P23229 1130 aa9.56□□□□□ -0.88
UBR1-209ENST00000569243 DCAF5Q96JK2 942 aa9.56□□□□□ -0.88
UBR1-209ENST00000569243 KRTAP9-6A0A140TA67 174 aa9.55□□□□□ -0.88
UBR1-209ENST00000569243 SLC35F4A4IF30 521 aa9.55□□□□□ -0.88
UBR1-209ENST00000569243 DESI1Q6ICB0 168 aa9.55□□□□□ -0.88
UBR1-209ENST00000569243 GALNT6Q8NCL4 622 aa9.55□□□□□ -0.88
UBR1-209ENST00000569243 FSHRP23945 695 aa9.54□□□□□ -0.88
UBR1-209ENST00000569243 CLCN1P35523 988 aa9.54□□□□□ -0.88
UBR1-209ENST00000569243 Q8N3U1 123 aa9.54□□□□□ -0.88
UBR1-209ENST00000569243 PROCP04070 461 aa9.53□□□□□ -0.88
UBR1-209ENST00000569243 HAP1P54257 671 aaPredicted RBP9.53□□□□□ -0.88
UBR1-209ENST00000569243 MTMR2Q13614 643 aa9.53□□□□□ -0.88
UBR1-209ENST00000569243 MAP10Q9P2G4 905 aa9.53□□□□□ -0.88
UBR1-209ENST00000569243 CNTNAP5Q8WYK1 1306 aa9.53□□□□□ -0.88
UBR1-209ENST00000569243 MOXD2PA6NHM9 499 aa9.52□□□□□ -0.89
UBR1-209ENST00000569243 CELA2BP08218 269 aaPredicted RBP9.52□□□□□ -0.89
UBR1-209ENST00000569243 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
UBR1-209ENST00000569243 SPIRE2Q8WWL2 714 aa9.52□□□□□ -0.89
UBR1-209ENST00000569243 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
UBR1-209ENST00000569243 BPHLQ86WA6 291 aaPredicted RBP9.51□□□□□ -0.89
UBR1-209ENST00000569243 VSIG10Q8N0Z9 540 aa9.51□□□□□ -0.89
UBR1-209ENST00000569243 SPDYE5A6NIY4 337 aa9.5□□□□□ -0.89
UBR1-209ENST00000569243 PHF20L1A8MW92 1017 aa9.5□□□□□ -0.89
UBR1-209ENST00000569243 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
UBR1-209ENST00000569243 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
UBR1-209ENST00000569243 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
UBR1-209ENST00000569243 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms