RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 USP21Q9UK80 565 aa6.79□□□□□ -1.32
HERPUD1-213ENST00000568358 RAB3GAP2Q9H2M9 1393 aa6.79□□□□□ -1.32
HERPUD1-213ENST00000568358 PRAG1Q86YV5 1406 aa6.78□□□□□ -1.32
HERPUD1-213ENST00000568358 YTHDC2Q9H6S0 1430 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-213ENST00000568358 XPCQ01831 940 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-213ENST00000568358 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
HERPUD1-213ENST00000568358 CFAP70Q5T0N1 1121 aa6.78□□□□□ -1.32
HERPUD1-213ENST00000568358 DCAF11Q8TEB1 546 aa6.78□□□□□ -1.32
HERPUD1-213ENST00000568358 TRPC5Q9UL62 973 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-213ENST00000568358 PIK3C2GO75747 1445 aa6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 LAMC1P11047 1609 aa6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 KNDC1Q76NI1 1749 aa6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 LMOD2Q6P5Q4 547 aa6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 KRT28Q7Z3Y7 464 aa6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 UPF1Q92900 1129 aaKnown RBP eCLIP6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 PRAM1Q96QH2 718 aa6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 CDK12Q9NYV4 1490 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 CDC42BPGQ6DT37 1551 aa6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 RGPD8O14715 1765 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-213ENST00000568358 TECPR2O15040 1411 aa6.76□□□□□ -1.33
HERPUD1-213ENST00000568358 C19orf67A6NJJ6 358 aa6.76□□□□□ -1.33
HERPUD1-213ENST00000568358 FNBP4Q8N3X1 1017 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-213ENST00000568358 PHF8Q9UPP1 1060 aa6.76□□□□□ -1.33
HERPUD1-213ENST00000568358 TRAK1Q9UPV9 953 aa6.76□□□□□ -1.33
HERPUD1-213ENST00000568358 KIF1AQ12756 1690 aa6.75□□□□□ -1.33
HERPUD1-213ENST00000568358 MYOM2P54296 1465 aa6.75□□□□□ -1.33
HERPUD1-213ENST00000568358 PLEKHH1Q9ULM0 1364 aa6.75□□□□□ -1.33
HERPUD1-213ENST00000568358 MARF1Q9Y4F3 1742 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-213ENST00000568358 EIF3AQ14152 1382 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-213ENST00000568358 FMN2Q9NZ56 1722 aa6.74□□□□□ -1.33
HERPUD1-213ENST00000568358 PLEKHG5O94827 1062 aa6.74□□□□□ -1.33
HERPUD1-213ENST00000568358 CHADLQ6NUI6 762 aa6.74□□□□□ -1.33
HERPUD1-213ENST00000568358 SPATA31A3Q5VYP0 1347 aa6.74□□□□□ -1.33
HERPUD1-213ENST00000568358 NRXN1Q9ULB1 1477 aa6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 GPRASP1Q5JY77 1395 aa6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 ATAD2Q6PL18 1390 aa6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 COL22A1Q8NFW1 1626 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 ECM2O94769 699 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 EVX2Q03828 476 aa6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 UNC5CLQ8IV45 518 aa6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 NGDNQ8NEJ9 315 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 PMFBP1Q8TBY8 1022 aa6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 GJD4Q96KN9 370 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 HIRIP3Q9BW71 556 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 CCDC9Q9Y3X0 531 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 MINK1Q8N4C8 1332 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 PXDNQ92626 1479 aa6.73□□□□□ -1.33
HERPUD1-213ENST00000568358 ARHGEF10O15013 1369 aa6.72□□□□□ -1.33
HERPUD1-213ENST00000568358 PAK3O75914 559 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-213ENST00000568358 CCDC125Q86Z20 511 aa6.72□□□□□ -1.33
HERPUD1-213ENST00000568358 DLC1Q96QB1 1528 aa6.71□□□□□ -1.33
HERPUD1-213ENST00000568358 SBNO1A3KN83 1393 aa6.71□□□□□ -1.33
HERPUD1-213ENST00000568358 RGS12O14924 1447 aa6.71□□□□□ -1.34
HERPUD1-213ENST00000568358 ATRNO75882 1429 aa6.71□□□□□ -1.34
HERPUD1-213ENST00000568358 ANKARQ7Z5J8 1434 aa6.71□□□□□ -1.34
HERPUD1-213ENST00000568358 WASLO00401 505 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-213ENST00000568358 RGL2O15211 777 aa6.71□□□□□ -1.34
HERPUD1-213ENST00000568358 SF3B2Q13435 895 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-213ENST00000568358 CABLES1Q8TDN4 633 aa6.71□□□□□ -1.34
HERPUD1-213ENST00000568358 TNS3Q68CZ2 1445 aa6.7□□□□□ -1.34
HERPUD1-213ENST00000568358 A0A0G2JS52 829 aa6.7□□□□□ -1.34
HERPUD1-213ENST00000568358 MYT1Q01538 1121 aa6.7□□□□□ -1.34
HERPUD1-213ENST00000568358 SPOCK2Q92563 424 aa6.7□□□□□ -1.34
HERPUD1-213ENST00000568358 BCL9LQ86UU0 1499 aa6.7□□□□□ -1.34
HERPUD1-213ENST00000568358 NUDT16Q96DE0 195 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-213ENST00000568358 CDK19Q9BWU1 502 aa6.69□□□□□ -1.34
HERPUD1-213ENST00000568358 ZRANB1Q9UGI0 708 aa6.69□□□□□ -1.34
HERPUD1-213ENST00000568358 FARP1Q9Y4F1 1045 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-213ENST00000568358 ITSN1Q15811 1721 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 FAM83GA6ND36 823 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 CLCN6P51797 869 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 VPS72Q15906 364 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 SEPT12Q8IYM1 358 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 CCDC61Q9Y6R9 512 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 ADGRB1O14514 1584 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 ADGRB2O60241 1585 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 USP32Q8NFA0 1604 aa6.68□□□□□ -1.34
HERPUD1-213ENST00000568358 NWD2Q9ULI1 1742 aa6.67□□□□□ -1.34
HERPUD1-213ENST00000568358 SLIT2O94813 1529 aa6.67□□□□□ -1.34
HERPUD1-213ENST00000568358 TULP4Q9NRJ4 1543 aa6.67□□□□□ -1.34
HERPUD1-213ENST00000568358 EVA1CP58658 441 aa6.67□□□□□ -1.34
HERPUD1-213ENST00000568358 SRPK2P78362 688 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-213ENST00000568358 BTG4Q9NY30 223 aa6.67□□□□□ -1.34
HERPUD1-213ENST00000568358 KIAA1210Q9ULL0 1709 aa6.67□□□□□ -1.34
HERPUD1-213ENST00000568358 RALGAPBQ86X10 1494 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 CD44P16070 742 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 NEUROD1Q13562 356 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 NBPF8Q3BBV2 869 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 KRT27Q7Z3Y8 459 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 ABTB2Q8N961 1025 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 PRDM11Q9NQV5 511 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 ARHGEF28Q8N1W1 1705 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 PRR36Q9H6K5 1346 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 BRWD3Q6RI45 1802 aa6.66□□□□□ -1.34
HERPUD1-213ENST00000568358 PLCH1Q4KWH8 1693 aa6.65□□□□□ -1.34
HERPUD1-213ENST00000568358 ONECUT3O60422 494 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-213ENST00000568358 GABBR2O75899 941 aa6.65□□□□□ -1.34
HERPUD1-213ENST00000568358 FAM98CQ17RN3 349 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-213ENST00000568358 NBPF1Q3BBV0 1214 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms