RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 MINK1Q8N4C8 1332 aaPredicted RBP22.05■■□□□ 1.12
COMMD4-223ENST00000568301 PRR36Q9H6K5 1346 aa22.05■■□□□ 1.12
COMMD4-223ENST00000568301 LRP5O75197 1615 aa22.04■■□□□ 1.12
COMMD4-223ENST00000568301 GPRASP1Q5JY77 1395 aa22.03■■□□□ 1.12
COMMD4-223ENST00000568301 COL14A1Q05707 1796 aaKnown RBP22.03■■□□□ 1.12
COMMD4-223ENST00000568301 WASLO00401 505 aaPredicted RBP22.03■■□□□ 1.12
COMMD4-223ENST00000568301 FAM182BQ5T319 152 aa22.03■■□□□ 1.12
COMMD4-223ENST00000568301 TULP4Q9NRJ4 1543 aa22.01■■□□□ 1.11
COMMD4-223ENST00000568301 EN1Q05925 392 aaPredicted RBP22■■□□□ 1.11
COMMD4-223ENST00000568301 SPATA31A5Q5VU36 1347 aa22■■□□□ 1.11
COMMD4-223ENST00000568301 SPATA31A7Q8IWB4 1347 aa22■■□□□ 1.11
COMMD4-223ENST00000568301 CRYBG1Q9Y4K1 1723 aa21.98■■□□□ 1.11
COMMD4-223ENST00000568301 PAK3O75914 559 aaPredicted RBP21.98■■□□□ 1.11
COMMD4-223ENST00000568301 NGDNQ8NEJ9 315 aaKnown RBP21.98■■□□□ 1.11
COMMD4-223ENST00000568301 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
COMMD4-223ENST00000568301 PRDM11Q9NQV5 511 aa21.96■■□□□ 1.11
COMMD4-223ENST00000568301 THSD7AQ9UPZ6 1657 aa21.95■■□□□ 1.1
COMMD4-223ENST00000568301 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
COMMD4-223ENST00000568301 NUDT16Q96DE0 195 aaKnown RBP21.93■■□□□ 1.1
COMMD4-223ENST00000568301 ITSN1Q15811 1721 aa21.92■■□□□ 1.1
COMMD4-223ENST00000568301 R3HDM1Q15032 1099 aaKnown RBP21.92■■□□□ 1.1
COMMD4-223ENST00000568301 CHRNA2Q15822 529 aa21.92■■□□□ 1.1
COMMD4-223ENST00000568301 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
COMMD4-223ENST00000568301 KIAA0232Q92628 1395 aa21.91■■□□□ 1.1
COMMD4-223ENST00000568301 SPATA31A1Q5TZJ5 1347 aa21.91■■□□□ 1.1
COMMD4-223ENST00000568301 EZH2Q15910 746 aaKnown RBP21.91■■□□□ 1.1
COMMD4-223ENST00000568301 DISP2A7MBM2 1401 aa21.9■■□□□ 1.1
COMMD4-223ENST00000568301 ATP7BP35670 1465 aa21.9■■□□□ 1.1
COMMD4-223ENST00000568301 CDK19Q9BWU1 502 aa21.89■■□□□ 1.09
COMMD4-223ENST00000568301 STRN4Q9NRL3 753 aa21.89■■□□□ 1.09
COMMD4-223ENST00000568301 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.09
COMMD4-223ENST00000568301 TRIM37O94972 964 aa21.88■■□□□ 1.09
COMMD4-223ENST00000568301 ZC3H6P61129 1189 aaKnown RBP21.88■■□□□ 1.09
COMMD4-223ENST00000568301 NUTM2GQ5VZR2 741 aa21.88■■□□□ 1.09
COMMD4-223ENST00000568301 CAMKK2Q96RR4 588 aa21.87■■□□□ 1.09
COMMD4-223ENST00000568301 CCDC61Q9Y6R9 512 aa21.87■■□□□ 1.09
COMMD4-223ENST00000568301 PHRF1Q9P1Y6 1649 aaKnown RBP21.87■■□□□ 1.09
COMMD4-223ENST00000568301 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
COMMD4-223ENST00000568301 USP35Q9P2H5 1018 aa21.85■■□□□ 1.09
COMMD4-223ENST00000568301 POLR3AO14802 1390 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-223ENST00000568301 PLEKHG3A1L390 1219 aa21.84■■□□□ 1.09
COMMD4-223ENST00000568301 NBPF8Q3BBV2 869 aa21.84■■□□□ 1.09
COMMD4-223ENST00000568301 APBA3O96018 575 aa21.83■■□□□ 1.09
COMMD4-223ENST00000568301 ACEP12821 1306 aa21.82■■□□□ 1.08
COMMD4-223ENST00000568301 EVA1CP58658 441 aa21.82■■□□□ 1.08
COMMD4-223ENST00000568301 NBPF1Q3BBV0 1214 aa21.81■■□□□ 1.08
COMMD4-223ENST00000568301 TOPAZ1Q8N9V7 1692 aa21.81■■□□□ 1.08
COMMD4-223ENST00000568301 PDE3BQ13370 1112 aa21.79■■□□□ 1.08
COMMD4-223ENST00000568301 LARP1Q6PKG0 1096 aaKnown RBP21.79■■□□□ 1.08
COMMD4-223ENST00000568301 BARGINQ6ZT62 677 aa21.79■■□□□ 1.08
COMMD4-223ENST00000568301 SSH2Q76I76 1423 aa21.79■■□□□ 1.08
COMMD4-223ENST00000568301 CAMTA1Q9Y6Y1 1673 aa21.79■■□□□ 1.08
COMMD4-223ENST00000568301 ABTB2Q8N961 1025 aa21.78■■□□□ 1.08
COMMD4-223ENST00000568301 PARD3Q8TEW0 1356 aa21.76■■□□□ 1.07
COMMD4-223ENST00000568301 NRKQ7Z2Y5 1582 aa21.76■■□□□ 1.07
COMMD4-223ENST00000568301 TCP11L2Q8N4U5 519 aa21.75■■□□□ 1.07
COMMD4-223ENST00000568301 RREB1Q92766 1687 aa21.75■■□□□ 1.07
COMMD4-223ENST00000568301 CENPJQ9HC77 1338 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-223ENST00000568301 SRPK2P78362 688 aaKnown RBP21.74■■□□□ 1.07
COMMD4-223ENST00000568301 LMO7Q8WWI1 1683 aa21.74■■□□□ 1.07
COMMD4-223ENST00000568301 CPDO75976 1380 aa21.74■■□□□ 1.07
COMMD4-223ENST00000568301 NUP188Q5SRE5 1749 aa21.73■■□□□ 1.07
COMMD4-223ENST00000568301 USP19O94966 1318 aa21.73■■□□□ 1.07
COMMD4-223ENST00000568301 BRD4O60885 1362 aaPredicted RBP21.73■■□□□ 1.07
COMMD4-223ENST00000568301 NLRP13Q86W25 1043 aa21.72■■□□□ 1.07
COMMD4-223ENST00000568301 GCP02774 474 aa21.71■■□□□ 1.07
COMMD4-223ENST00000568301 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
COMMD4-223ENST00000568301 CABP2Q9NPB3 220 aa21.7■■□□□ 1.06
COMMD4-223ENST00000568301 THRAP3Q9Y2W1 955 aaKnown RBP21.7■■□□□ 1.06
COMMD4-223ENST00000568301 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
COMMD4-223ENST00000568301 L3MBTL2Q969R5 705 aa21.68■■□□□ 1.06
COMMD4-223ENST00000568301 QRICH2Q9H0J4 1663 aa21.67■■□□□ 1.06
COMMD4-223ENST00000568301 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
COMMD4-223ENST00000568301 PARP4Q9UKK3 1724 aaKnown RBP21.66■■□□□ 1.06
COMMD4-223ENST00000568301 CABP1Q9NZU7 370 aa21.66■■□□□ 1.06
COMMD4-223ENST00000568301 ZBTB7CA1YPR0 619 aa21.64■■□□□ 1.05
COMMD4-223ENST00000568301 CRB1P82279 1406 aa21.63■■□□□ 1.05
COMMD4-223ENST00000568301 USP6P35125 1406 aa21.63■■□□□ 1.05
COMMD4-223ENST00000568301 EVC2Q86UK5 1308 aa21.62■■□□□ 1.05
COMMD4-223ENST00000568301 NLRP6P59044 892 aa21.62■■□□□ 1.05
COMMD4-223ENST00000568301 SPON1Q9HCB6 807 aa21.62■■□□□ 1.05
COMMD4-223ENST00000568301 PEAK1Q9H792 1746 aa21.61■■□□□ 1.05
COMMD4-223ENST00000568301 KCNQ2O43526 872 aa21.61■■□□□ 1.05
COMMD4-223ENST00000568301 C11orf95C9JLR9 678 aaPredicted RBP21.6■■□□□ 1.05
COMMD4-223ENST00000568301 YY1P25490 414 aa21.6■■□□□ 1.05
COMMD4-223ENST00000568301 OVOS2A0A0G2JMS6 1433 aa21.6■■□□□ 1.05
COMMD4-223ENST00000568301 OVOS2A0A0J9YW53 1432 aa21.6■■□□□ 1.05
COMMD4-223ENST00000568301 OVOS2Q6IE36 1432 aa21.6■■□□□ 1.05
COMMD4-223ENST00000568301 SBF2Q86WG5 1849 aa21.59■■□□□ 1.05
COMMD4-223ENST00000568301 TRPM1Q7Z4N2 1603 aa21.59■■□□□ 1.05
COMMD4-223ENST00000568301 PTF1AQ7RTS3 328 aa21.59■■□□□ 1.05
COMMD4-223ENST00000568301 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
COMMD4-223ENST00000568301 PPP1R1BQ9UD71 204 aaPredicted RBP21.59■■□□□ 1.05
COMMD4-223ENST00000568301 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
COMMD4-223ENST00000568301 DDB1Q16531 1140 aa21.58■■□□□ 1.05
COMMD4-223ENST00000568301 ZNF692Q9BU19 519 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-223ENST00000568301 SLIT3O75094 1523 aa21.58■■□□□ 1.04
COMMD4-223ENST00000568301 LRRC37A3O60309 1634 aa21.58■■□□□ 1.04
COMMD4-223ENST00000568301 PLSCR1O15162 318 aa21.57■■□□□ 1.04
COMMD4-223ENST00000568301 TOM1L2Q6ZVM7 507 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms