RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-238ENST00000568169 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
TCF4-238ENST00000568169 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
TCF4-238ENST00000568169 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
TCF4-238ENST00000568169 THSD7AQ9UPZ6 1657 aa16.85■□□□□ 0.29
TCF4-238ENST00000568169 TNS1Q9HBL0 1735 aaKnown RBP16.84■□□□□ 0.29
TCF4-238ENST00000568169 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
TCF4-238ENST00000568169 TRAK1Q9UPV9 953 aa16.84■□□□□ 0.29
TCF4-238ENST00000568169 SPATA31A5Q5VU36 1347 aa16.84■□□□□ 0.29
TCF4-238ENST00000568169 SPATA31A7Q8IWB4 1347 aa16.84■□□□□ 0.29
TCF4-238ENST00000568169 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
TCF4-238ENST00000568169 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
TCF4-238ENST00000568169 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
TCF4-238ENST00000568169 HRCP23327 699 aa16.83■□□□□ 0.28
TCF4-238ENST00000568169 WASLO00401 505 aaPredicted RBP16.82■□□□□ 0.28
TCF4-238ENST00000568169 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
TCF4-238ENST00000568169 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
TCF4-238ENST00000568169 ARHGEF28Q8N1W1 1705 aaKnown RBP16.81■□□□□ 0.28
TCF4-238ENST00000568169 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
TCF4-238ENST00000568169 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
TCF4-238ENST00000568169 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
TCF4-238ENST00000568169 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
TCF4-238ENST00000568169 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.28
TCF4-238ENST00000568169 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
TCF4-238ENST00000568169 STAC3Q96MF2 364 aa16.77■□□□□ 0.28
TCF4-238ENST00000568169 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
TCF4-238ENST00000568169 SPATA31A1Q5TZJ5 1347 aa16.76■□□□□ 0.27
TCF4-238ENST00000568169 ATP7BP35670 1465 aa16.76■□□□□ 0.27
TCF4-238ENST00000568169 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
TCF4-238ENST00000568169 KIAA0232Q92628 1395 aa16.76■□□□□ 0.27
TCF4-238ENST00000568169 R3HDM1Q15032 1099 aaKnown RBP16.75■□□□□ 0.27
TCF4-238ENST00000568169 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
TCF4-238ENST00000568169 TOPAZ1Q8N9V7 1692 aa16.74■□□□□ 0.27
TCF4-238ENST00000568169 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
TCF4-238ENST00000568169 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
TCF4-238ENST00000568169 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
TCF4-238ENST00000568169 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
TCF4-238ENST00000568169 TRIM37O94972 964 aa16.72■□□□□ 0.27
TCF4-238ENST00000568169 RREB1Q92766 1687 aa16.72■□□□□ 0.27
TCF4-238ENST00000568169 STRN4Q9NRL3 753 aa16.71■□□□□ 0.27
TCF4-238ENST00000568169 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
TCF4-238ENST00000568169 PARD3Q8TEW0 1356 aa16.7■□□□□ 0.26
TCF4-238ENST00000568169 ZC3H6P61129 1189 aaKnown RBP16.7■□□□□ 0.26
TCF4-238ENST00000568169 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
TCF4-238ENST00000568169 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
TCF4-238ENST00000568169 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
TCF4-238ENST00000568169 NUP188Q5SRE5 1749 aa16.69■□□□□ 0.26
TCF4-238ENST00000568169 KIAA1210Q9ULL0 1709 aa16.69■□□□□ 0.26
TCF4-238ENST00000568169 SSH2Q76I76 1423 aa16.69■□□□□ 0.26
TCF4-238ENST00000568169 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
TCF4-238ENST00000568169 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
TCF4-238ENST00000568169 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
TCF4-238ENST00000568169 NUTM2GQ5VZR2 741 aa16.68■□□□□ 0.26
TCF4-238ENST00000568169 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
TCF4-238ENST00000568169 ACEP12821 1306 aa16.68■□□□□ 0.26
TCF4-238ENST00000568169 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
TCF4-238ENST00000568169 APBA3O96018 575 aa16.67■□□□□ 0.26
TCF4-238ENST00000568169 EVA1CP58658 441 aa16.66■□□□□ 0.26
TCF4-238ENST00000568169 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
TCF4-238ENST00000568169 CPDO75976 1380 aa16.65■□□□□ 0.26
TCF4-238ENST00000568169 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
TCF4-238ENST00000568169 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
TCF4-238ENST00000568169 SBF2Q86WG5 1849 aa16.64■□□□□ 0.25
TCF4-238ENST00000568169 LARP1Q6PKG0 1096 aaKnown RBP16.64■□□□□ 0.25
TCF4-238ENST00000568169 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
TCF4-238ENST00000568169 USP19O94966 1318 aa16.64■□□□□ 0.25
TCF4-238ENST00000568169 ABTB2Q8N961 1025 aa16.63■□□□□ 0.25
TCF4-238ENST00000568169 THRAP3Q9Y2W1 955 aaKnown RBP16.61■□□□□ 0.25
TCF4-238ENST00000568169 PEAK1Q9H792 1746 aa16.6■□□□□ 0.25
TCF4-238ENST00000568169 NBPF14Q5TI25 921 aa16.6■□□□□ 0.25
TCF4-238ENST00000568169 NLRP13Q86W25 1043 aa16.6■□□□□ 0.25
TCF4-238ENST00000568169 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
TCF4-238ENST00000568169 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
TCF4-238ENST00000568169 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
TCF4-238ENST00000568169 GCP02774 474 aa16.59■□□□□ 0.25
TCF4-238ENST00000568169 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.24
TCF4-238ENST00000568169 BRD4O60885 1362 aaPredicted RBP16.58■□□□□ 0.24
TCF4-238ENST00000568169 COL18A1P39060 1754 aa16.57■□□□□ 0.24
TCF4-238ENST00000568169 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
TCF4-238ENST00000568169 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
TCF4-238ENST00000568169 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
TCF4-238ENST00000568169 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
TCF4-238ENST00000568169 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
TCF4-238ENST00000568169 CRB1P82279 1406 aa16.56■□□□□ 0.24
TCF4-238ENST00000568169 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
TCF4-238ENST00000568169 SRPK2P78362 688 aaKnown RBP16.55■□□□□ 0.24
TCF4-238ENST00000568169 RGPD5Q99666 1765 aa16.55■□□□□ 0.24
TCF4-238ENST00000568169 SLIT3O75094 1523 aa16.55■□□□□ 0.24
TCF4-238ENST00000568169 AATKQ6ZMQ8 1374 aa16.54■□□□□ 0.24
TCF4-238ENST00000568169 SPON1Q9HCB6 807 aa16.54■□□□□ 0.24
TCF4-238ENST00000568169 CABP2Q9NPB3 220 aa16.54■□□□□ 0.24
TCF4-238ENST00000568169 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
TCF4-238ENST00000568169 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
TCF4-238ENST00000568169 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
TCF4-238ENST00000568169 USP6P35125 1406 aa16.53■□□□□ 0.24
TCF4-238ENST00000568169 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
TCF4-238ENST00000568169 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
TCF4-238ENST00000568169 KCNQ2O43526 872 aa16.53■□□□□ 0.24
TCF4-238ENST00000568169 CASZ1Q86V15 1759 aa16.52■□□□□ 0.24
TCF4-238ENST00000568169 PLSCR1O15162 318 aa16.52■□□□□ 0.24
TCF4-238ENST00000568169 PIK3C2AO00443 1686 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms