RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
SMG1-214ENST00000568038 DENND4BO75064 1496 aaPredicted RBP11.68□□□□□ -0.54
SMG1-214ENST00000568038 MBD5Q9P267 1494 aa11.68□□□□□ -0.54
SMG1-214ENST00000568038 TSPY4P0CV99 314 aa11.67□□□□□ -0.54
SMG1-214ENST00000568038 TSPY10P0CW01 314 aa11.67□□□□□ -0.54
SMG1-214ENST00000568038 ABCC5O15440 1437 aa11.67□□□□□ -0.54
SMG1-214ENST00000568038 DAPK1P53355 1430 aa11.67□□□□□ -0.54
SMG1-214ENST00000568038 COL17A1Q9UMD9 1497 aaPredicted RBP11.66□□□□□ -0.54
SMG1-214ENST00000568038 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
SMG1-214ENST00000568038 CCDC141Q6ZP82 1450 aa11.65□□□□□ -0.54
SMG1-214ENST00000568038 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.54
SMG1-214ENST00000568038 ADGRG1Q9Y653 693 aa11.65□□□□□ -0.54
SMG1-214ENST00000568038 POGZQ7Z3K3 1410 aa11.65□□□□□ -0.54
SMG1-214ENST00000568038 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
SMG1-214ENST00000568038 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
SMG1-214ENST00000568038 ARHGEF5Q12774 1597 aa11.64□□□□□ -0.55
SMG1-214ENST00000568038 PTPRKQ15262 1439 aa11.64□□□□□ -0.55
SMG1-214ENST00000568038 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
SMG1-214ENST00000568038 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
SMG1-214ENST00000568038 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
SMG1-214ENST00000568038 APLP1P51693 650 aa11.63□□□□□ -0.55
SMG1-214ENST00000568038 C9orf84Q5VXU9 1444 aa11.62□□□□□ -0.55
SMG1-214ENST00000568038 KDM6BO15054 1643 aa11.62□□□□□ -0.55
SMG1-214ENST00000568038 PCGF6Q9BYE7 350 aa11.62□□□□□ -0.55
SMG1-214ENST00000568038 RRP7BPQ9NSQ0 103 aa11.62□□□□□ -0.55
SMG1-214ENST00000568038 RICTORQ6R327 1708 aa11.61□□□□□ -0.55
SMG1-214ENST00000568038 DNAJB2P25686 324 aa11.61□□□□□ -0.55
SMG1-214ENST00000568038 FRMPD1Q5SYB0 1578 aa11.61□□□□□ -0.55
SMG1-214ENST00000568038 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
SMG1-214ENST00000568038 TJAP1Q5JTD0 557 aa11.6□□□□□ -0.55
SMG1-214ENST00000568038 MTRQ99707 1265 aa11.6□□□□□ -0.55
SMG1-214ENST00000568038 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
SMG1-214ENST00000568038 KDM5CP41229 1560 aa11.59□□□□□ -0.55
SMG1-214ENST00000568038 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
SMG1-214ENST00000568038 ANKRD30AQ9BXX3 1397 aa11.59□□□□□ -0.55
SMG1-214ENST00000568038 HIC1Q14526 733 aa11.59□□□□□ -0.55
SMG1-214ENST00000568038 RTEL1-TNFRSF6BF6WH68 1400 aa11.59□□□□□ -0.55
SMG1-214ENST00000568038 FECHP22830 423 aa11.58□□□□□ -0.56
SMG1-214ENST00000568038 NECTIN2Q92692 538 aa11.58□□□□□ -0.56
SMG1-214ENST00000568038 ATP7AQ04656 1500 aa11.58□□□□□ -0.56
SMG1-214ENST00000568038 MLH3Q9UHC1 1453 aa11.57□□□□□ -0.56
SMG1-214ENST00000568038 ZNF516Q92618 1163 aa11.57□□□□□ -0.56
SMG1-214ENST00000568038 IL21Q9HBE4 155 aa11.57□□□□□ -0.56
SMG1-214ENST00000568038 NCOA1Q15788 1441 aa11.57□□□□□ -0.56
SMG1-214ENST00000568038 YEATS2Q9ULM3 1422 aa11.57□□□□□ -0.56
SMG1-214ENST00000568038 HECW2Q9P2P5 1572 aa11.57□□□□□ -0.56
SMG1-214ENST00000568038 MAST1Q9Y2H9 1570 aa11.57□□□□□ -0.56
SMG1-214ENST00000568038 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
SMG1-214ENST00000568038 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
SMG1-214ENST00000568038 ZMYM4Q5VZL5 1548 aa11.56□□□□□ -0.56
SMG1-214ENST00000568038 ZFYVE16Q7Z3T8 1539 aa11.56□□□□□ -0.56
SMG1-214ENST00000568038 COPS2P61201 443 aa11.56□□□□□ -0.56
SMG1-214ENST00000568038 TMEM134Q9H6X4 195 aa11.56□□□□□ -0.56
SMG1-214ENST00000568038 INO80Q9ULG1 1556 aaPredicted RBP11.56□□□□□ -0.56
SMG1-214ENST00000568038 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
SMG1-214ENST00000568038 KIF15Q9NS87 1388 aa11.55□□□□□ -0.56
SMG1-214ENST00000568038 GNPATO15228 680 aa11.55□□□□□ -0.56
SMG1-214ENST00000568038 OATP04181 439 aa11.55□□□□□ -0.56
SMG1-214ENST00000568038 MAGI2Q86UL8 1455 aa11.55□□□□□ -0.56
SMG1-214ENST00000568038 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
SMG1-214ENST00000568038 RGS20O76081 388 aa11.54□□□□□ -0.56
SMG1-214ENST00000568038 GPIHBP1Q8IV16 184 aa11.53□□□□□ -0.56
SMG1-214ENST00000568038 PXYLP1Q8TE99 480 aa11.53□□□□□ -0.56
SMG1-214ENST00000568038 PLXNC1O60486 1568 aa11.53□□□□□ -0.56
SMG1-214ENST00000568038 ABCA6Q8N139 1617 aa11.53□□□□□ -0.56
SMG1-214ENST00000568038 HFM1A2PYH4 1435 aa11.52□□□□□ -0.56
SMG1-214ENST00000568038 NAIPQ13075 1403 aa11.52□□□□□ -0.56
SMG1-214ENST00000568038 ATP10AO60312 1499 aa11.52□□□□□ -0.56
SMG1-214ENST00000568038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.52□□□□□ -0.57
SMG1-214ENST00000568038 DIP2CQ9Y2E4 1556 aa11.52□□□□□ -0.57
SMG1-214ENST00000568038 DHX29Q7Z478 1369 aaKnown RBP11.52□□□□□ -0.57
SMG1-214ENST00000568038 A2MP01023 1474 aa11.51□□□□□ -0.57
SMG1-214ENST00000568038 GPR37O15354 613 aa11.51□□□□□ -0.57
SMG1-214ENST00000568038 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
SMG1-214ENST00000568038 SETD5Q9C0A6 1442 aa11.51□□□□□ -0.57
SMG1-214ENST00000568038 ANKRD50Q9ULJ7 1429 aa11.51□□□□□ -0.57
SMG1-214ENST00000568038 ARHGEF40Q8TER5 1519 aa11.5□□□□□ -0.57
SMG1-214ENST00000568038 DUOX2Q9NRD8 1548 aa11.5□□□□□ -0.57
SMG1-214ENST00000568038 KIF3BO15066 747 aa11.5□□□□□ -0.57
SMG1-214ENST00000568038 METTL3Q86U44 580 aaKnown RBP11.5□□□□□ -0.57
SMG1-214ENST00000568038 PCDHB3Q9Y5E6 796 aa11.5□□□□□ -0.57
SMG1-214ENST00000568038 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
SMG1-214ENST00000568038 PRR14Q9BWN1 585 aa11.49□□□□□ -0.57
SMG1-214ENST00000568038 ARID4BQ4LE39 1312 aaPredicted RBP11.49□□□□□ -0.57
SMG1-214ENST00000568038 CFHP08603 1231 aa11.48□□□□□ -0.57
SMG1-214ENST00000568038 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
SMG1-214ENST00000568038 RAB3GAP2Q9H2M9 1393 aa11.48□□□□□ -0.57
SMG1-214ENST00000568038 GCC2Q8IWJ2 1684 aa11.48□□□□□ -0.57
SMG1-214ENST00000568038 ERBINQ96RT1 1412 aa11.47□□□□□ -0.57
SMG1-214ENST00000568038 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
SMG1-214ENST00000568038 GGT6Q6P531 493 aa11.47□□□□□ -0.57
SMG1-214ENST00000568038 BLOC1S3Q6QNY0 202 aa11.47□□□□□ -0.57
SMG1-214ENST00000568038 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
SMG1-214ENST00000568038 SLC10A3P09131 477 aa11.46□□□□□ -0.57
SMG1-214ENST00000568038 MLECQ14165 292 aa11.46□□□□□ -0.57
SMG1-214ENST00000568038 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
SMG1-214ENST00000568038 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
SMG1-214ENST00000568038 SIGLEC1Q9BZZ2 1709 aa11.44□□□□□ -0.58
SMG1-214ENST00000568038 ZPR1O75312 459 aa11.44□□□□□ -0.58
SMG1-214ENST00000568038 REREQ9P2R6 1566 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms