RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-217ENST00000567817 ATP1B4Q9UN42 357 aaPredicted RBP9.16□□□□□ -0.94
CAPN3-217ENST00000567817 TRIM32Q13049 653 aa9.15□□□□□ -0.94
CAPN3-217ENST00000567817 LAPTM4AQ15012 233 aa9.15□□□□□ -0.94
CAPN3-217ENST00000567817 EVA1BQ9NVM1 165 aa9.15□□□□□ -0.94
CAPN3-217ENST00000567817 KCNH2Q12809 1159 aa9.14□□□□□ -0.95
CAPN3-217ENST00000567817 TSC1Q92574 1164 aa9.14□□□□□ -0.95
CAPN3-217ENST00000567817 PRR20EP86478 221 aa9.13□□□□□ -0.95
CAPN3-217ENST00000567817 PRR20CP86479 221 aa9.13□□□□□ -0.95
CAPN3-217ENST00000567817 PRR20DP86480 221 aa9.13□□□□□ -0.95
CAPN3-217ENST00000567817 PRR20BP86481 221 aa9.13□□□□□ -0.95
CAPN3-217ENST00000567817 PRR20AP86496 221 aa9.13□□□□□ -0.95
CAPN3-217ENST00000567817 F12P00748 615 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-217ENST00000567817 FBXO31Q5XUX0 539 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-217ENST00000567817 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-217ENST00000567817 TRIM67Q6ZTA4 783 aa9.12□□□□□ -0.95
CAPN3-217ENST00000567817 UNC93B1Q9H1C4 597 aa9.12□□□□□ -0.95
CAPN3-217ENST00000567817 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
CAPN3-217ENST00000567817 NRG2O14511 850 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-217ENST00000567817 GDF9O60383 454 aa9.11□□□□□ -0.95
CAPN3-217ENST00000567817 GFRA3O60609 400 aa9.11□□□□□ -0.95
CAPN3-217ENST00000567817 WNT7BP56706 349 aa9.11□□□□□ -0.95
CAPN3-217ENST00000567817 CADPSQ9ULU8 1353 aa9.11□□□□□ -0.95
CAPN3-217ENST00000567817 PER1O15534 1290 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-217ENST00000567817 CTHP32929 405 aa9.1□□□□□ -0.95
CAPN3-217ENST00000567817 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
CAPN3-217ENST00000567817 MAP10Q9P2G4 905 aa9.09□□□□□ -0.95
CAPN3-217ENST00000567817 WNT7AO00755 349 aa9.08□□□□□ -0.96
CAPN3-217ENST00000567817 RFC5P40937 340 aa9.08□□□□□ -0.96
CAPN3-217ENST00000567817 RIMBP3CA6NJZ7 1639 aa9.08□□□□□ -0.96
CAPN3-217ENST00000567817 RIMBP3BA6NNM3 1639 aa9.08□□□□□ -0.96
CAPN3-217ENST00000567817 RIMBP3Q9UFD9 1639 aa9.08□□□□□ -0.96
CAPN3-217ENST00000567817 TNFRSF10AO00220 468 aa9.07□□□□□ -0.96
CAPN3-217ENST00000567817 SKOR1P84550 965 aa9.07□□□□□ -0.96
CAPN3-217ENST00000567817 CTDSPL2Q05D32 466 aa9.07□□□□□ -0.96
CAPN3-217ENST00000567817 FOXC1Q12948 553 aa9.07□□□□□ -0.96
CAPN3-217ENST00000567817 CEP164Q9UPV0 1460 aa9.07□□□□□ -0.96
CAPN3-217ENST00000567817 AP1G2O75843 785 aa9.06□□□□□ -0.96
CAPN3-217ENST00000567817 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
CAPN3-217ENST00000567817 SH3BP2P78314 561 aa9.04□□□□□ -0.96
CAPN3-217ENST00000567817 TMEM259Q4ZIN3 620 aa9.04□□□□□ -0.96
CAPN3-217ENST00000567817 ZNF511Q8NB15 262 aa9.04□□□□□ -0.96
CAPN3-217ENST00000567817 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
CAPN3-217ENST00000567817 USP17L8P0C7I0 530 aa9.03□□□□□ -0.96
CAPN3-217ENST00000567817 LINC01559Q495D7 138 aa9.03□□□□□ -0.96
CAPN3-217ENST00000567817 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
CAPN3-217ENST00000567817 BAP1Q92560 729 aa9.03□□□□□ -0.96
CAPN3-217ENST00000567817 Q6ZNB5 142 aa9.02□□□□□ -0.97
CAPN3-217ENST00000567817 CYP4X1Q8N118 509 aa9.02□□□□□ -0.97
CAPN3-217ENST00000567817 LRRN4Q8WUT4 740 aa9.02□□□□□ -0.97
CAPN3-217ENST00000567817 MRGPRX2Q96LB1 330 aa9.02□□□□□ -0.97
CAPN3-217ENST00000567817 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.97
CAPN3-217ENST00000567817 NBPF14Q5TI25 921 aa9.01□□□□□ -0.97
CAPN3-217ENST00000567817 EHBP1Q8NDI1 1231 aa9.01□□□□□ -0.97
CAPN3-217ENST00000567817 DGAT1O75907 488 aa9□□□□□ -0.97
CAPN3-217ENST00000567817 SNIP1Q8TAD8 396 aaKnown RBP9□□□□□ -0.97
CAPN3-217ENST00000567817 GPKOWQ92917 476 aaPredicted RBP eCLIP9□□□□□ -0.97
CAPN3-217ENST00000567817 FAM187AA6NFU0 413 aa8.99□□□□□ -0.97
CAPN3-217ENST00000567817 PKDCCQ504Y2 493 aa8.99□□□□□ -0.97
CAPN3-217ENST00000567817 FANCD2Q9BXW9 1451 aa8.99□□□□□ -0.97
CAPN3-217ENST00000567817 ZC3H4Q9UPT8 1303 aaKnown RBP8.99□□□□□ -0.97
CAPN3-217ENST00000567817 TTC24A2A3L6 582 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-217ENST00000567817 VARSP26640 1264 aaKnown RBP8.98□□□□□ -0.97
CAPN3-217ENST00000567817 BANK1Q8NDB2 785 aa8.98□□□□□ -0.97
CAPN3-217ENST00000567817 FKBPLQ9UIM3 349 aa8.98□□□□□ -0.97
CAPN3-217ENST00000567817 SIAH2O43255 324 aa8.97□□□□□ -0.97
CAPN3-217ENST00000567817 NR6A1Q15406 480 aa8.97□□□□□ -0.97
CAPN3-217ENST00000567817 BPHLQ86WA6 291 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-217ENST00000567817 PNMA1Q8ND90 353 aa8.97□□□□□ -0.97
CAPN3-217ENST00000567817 HMX1Q9NP08 348 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-217ENST00000567817 SOCS7O14512 581 aa8.96□□□□□ -0.98
CAPN3-217ENST00000567817 FOXJ1Q92949 421 aa8.96□□□□□ -0.98
CAPN3-217ENST00000567817 SH3BP5LQ7L8J4 393 aa8.95□□□□□ -0.98
CAPN3-217ENST00000567817 RSF1Q96T23 1441 aaPredicted RBP8.95□□□□□ -0.98
CAPN3-217ENST00000567817 AGERQ15109 404 aa8.94□□□□□ -0.98
CAPN3-217ENST00000567817 PDXDC2PQ6P474 469 aa8.94□□□□□ -0.98
CAPN3-217ENST00000567817 TRAF7Q6Q0C0 670 aa8.94□□□□□ -0.98
CAPN3-217ENST00000567817 SH3RF1Q7Z6J0 888 aa8.94□□□□□ -0.98
CAPN3-217ENST00000567817 MPNDQ8N594 471 aa8.94□□□□□ -0.98
CAPN3-217ENST00000567817 FAM174AQ8TBP5 190 aa8.94□□□□□ -0.98
CAPN3-217ENST00000567817 CFTRP13569 1480 aa8.94□□□□□ -0.98
CAPN3-217ENST00000567817 SMPD1P17405 629 aa8.93□□□□□ -0.98
CAPN3-217ENST00000567817 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
CAPN3-217ENST00000567817 CYB5RLQ6IPT4 315 aa8.93□□□□□ -0.98
CAPN3-217ENST00000567817 EPS8L1Q8TE68 723 aa8.93□□□□□ -0.98
CAPN3-217ENST00000567817 TRIM34Q9BYJ4 488 aa8.93□□□□□ -0.98
CAPN3-217ENST00000567817 MROH2BQ7Z745 1585 aa8.93□□□□□ -0.98
CAPN3-217ENST00000567817 IFT140Q96RY7 1462 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 J3QL48 77 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 APBB1O00213 710 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 LCE2BO14633 110 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 AVPP01185 164 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 GJD4Q96KN9 370 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-217ENST00000567817 C1QTNF2Q9BXJ5 285 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 TLL2Q9Y6L7 1015 aa8.92□□□□□ -0.98
CAPN3-217ENST00000567817 MYT1Q01538 1121 aa8.91□□□□□ -0.98
CAPN3-217ENST00000567817 GPSM3Q9Y4H4 160 aa8.91□□□□□ -0.98
CAPN3-217ENST00000567817 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.98
CAPN3-217ENST00000567817 ARAP1Q96P48 1450 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms