RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 NUTM2GQ5VZR2 741 aa10.2□□□□□ -0.78
SMPD3-210ENST00000567811 ZNF692Q9BU19 519 aaPredicted RBP10.2□□□□□ -0.78
SMPD3-210ENST00000567811 TRPM3Q9HCF6 1732 aaPredicted RBP10.2□□□□□ -0.78
SMPD3-210ENST00000567811 QRICH2Q9H0J4 1663 aa10.19□□□□□ -0.78
SMPD3-210ENST00000567811 ATP7BP35670 1465 aa10.19□□□□□ -0.78
SMPD3-210ENST00000567811 ATRNO75882 1429 aa10.19□□□□□ -0.78
SMPD3-210ENST00000567811 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
SMPD3-210ENST00000567811 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
SMPD3-210ENST00000567811 CCDC9Q9Y3X0 531 aaKnown RBP10.19□□□□□ -0.78
SMPD3-210ENST00000567811 ALS2Q96Q42 1657 aa10.18□□□□□ -0.78
SMPD3-210ENST00000567811 VPS72Q15906 364 aa10.18□□□□□ -0.78
SMPD3-210ENST00000567811 BTG4Q9NY30 223 aa10.18□□□□□ -0.78
SMPD3-210ENST00000567811 SLIT2O94813 1529 aa10.17□□□□□ -0.78
SMPD3-210ENST00000567811 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
SMPD3-210ENST00000567811 ONECUT3O60422 494 aaPredicted RBP10.17□□□□□ -0.78
SMPD3-210ENST00000567811 ZC3H6P61129 1189 aaKnown RBP10.17□□□□□ -0.78
SMPD3-210ENST00000567811 TIMELESSQ9UNS1 1208 aa10.17□□□□□ -0.78
SMPD3-210ENST00000567811 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
SMPD3-210ENST00000567811 SLC24A1O60721 1099 aa10.16□□□□□ -0.78
SMPD3-210ENST00000567811 EVA1CP58658 441 aa10.16□□□□□ -0.78
SMPD3-210ENST00000567811 NLRP6P59044 892 aa10.16□□□□□ -0.78
SMPD3-210ENST00000567811 PRDM11Q9NQV5 511 aa10.16□□□□□ -0.78
SMPD3-210ENST00000567811 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
SMPD3-210ENST00000567811 NWD2Q9ULI1 1742 aa10.16□□□□□ -0.78
SMPD3-210ENST00000567811 GCP02774 474 aa10.15□□□□□ -0.78
SMPD3-210ENST00000567811 TOPAZ1Q8N9V7 1692 aa10.15□□□□□ -0.79
SMPD3-210ENST00000567811 RGS12O14924 1447 aa10.15□□□□□ -0.79
SMPD3-210ENST00000567811 ABCA3Q99758 1704 aa10.14□□□□□ -0.79
SMPD3-210ENST00000567811 ST20-MTHFSA0A0A6YYL1 179 aa10.14□□□□□ -0.79
SMPD3-210ENST00000567811 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
SMPD3-210ENST00000567811 CCDC125Q86Z20 511 aa10.14□□□□□ -0.79
SMPD3-210ENST00000567811 SEPT12Q8IYM1 358 aa10.14□□□□□ -0.79
SMPD3-210ENST00000567811 PUS7Q96PZ0 661 aaKnown RBP10.14□□□□□ -0.79
SMPD3-210ENST00000567811 COL14A1Q05707 1796 aaKnown RBP10.14□□□□□ -0.79
SMPD3-210ENST00000567811 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
SMPD3-210ENST00000567811 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
SMPD3-210ENST00000567811 BRWD3Q6RI45 1802 aa10.13□□□□□ -0.79
SMPD3-210ENST00000567811 TMC1Q8TDI8 760 aa10.13□□□□□ -0.79
SMPD3-210ENST00000567811 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
SMPD3-210ENST00000567811 TTC21BQ7Z4L5 1316 aa10.12□□□□□ -0.79
SMPD3-210ENST00000567811 RALGAPBQ86X10 1494 aa10.12□□□□□ -0.79
SMPD3-210ENST00000567811 STRN4Q9NRL3 753 aa10.12□□□□□ -0.79
SMPD3-210ENST00000567811 CRYBG1Q9Y4K1 1723 aa10.12□□□□□ -0.79
SMPD3-210ENST00000567811 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
SMPD3-210ENST00000567811 KIAA0232Q92628 1395 aa10.12□□□□□ -0.79
SMPD3-210ENST00000567811 SBNO2Q9Y2G9 1366 aa10.12□□□□□ -0.79
SMPD3-210ENST00000567811 SPATA31A5Q5VU36 1347 aa10.11□□□□□ -0.79
SMPD3-210ENST00000567811 SPATA31A7Q8IWB4 1347 aa10.11□□□□□ -0.79
SMPD3-210ENST00000567811 USP6P35125 1406 aa10.11□□□□□ -0.79
SMPD3-210ENST00000567811 FAM98CQ17RN3 349 aaKnown RBP10.11□□□□□ -0.79
SMPD3-210ENST00000567811 CCER1Q8TC90 406 aaPredicted RBP10.11□□□□□ -0.79
SMPD3-210ENST00000567811 KTN1Q86UP2 1357 aaKnown RBP10.11□□□□□ -0.79
SMPD3-210ENST00000567811 GLI3P10071 1580 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 A0A0G2JS52 829 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 MYT1Q01538 1121 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 KRT27Q7Z3Y8 459 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 HDGFL2Q7Z4V5 671 aaPredicted RBP10.1□□□□□ -0.79
SMPD3-210ENST00000567811 KCNH5Q8NCM2 988 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 TESK2Q96S53 571 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 TERF2IPQ9NYB0 399 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 AKAP12Q02952 1782 aa10.1□□□□□ -0.79
SMPD3-210ENST00000567811 USP19O94966 1318 aa10.09□□□□□ -0.79
SMPD3-210ENST00000567811 TTC21AQ8NDW8 1320 aa10.09□□□□□ -0.79
SMPD3-210ENST00000567811 SSH2Q76I76 1423 aa10.09□□□□□ -0.79
SMPD3-210ENST00000567811 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
SMPD3-210ENST00000567811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMPD3-210ENST00000567811 SPATA31A1Q5TZJ5 1347 aa10.08□□□□□ -0.8
SMPD3-210ENST00000567811 CPSF1Q10570 1443 aaKnown RBP10.08□□□□□ -0.8
SMPD3-210ENST00000567811 PHRF1Q9P1Y6 1649 aaKnown RBP10.08□□□□□ -0.8
SMPD3-210ENST00000567811 TMF1P82094 1093 aa10.08□□□□□ -0.8
SMPD3-210ENST00000567811 USP35Q9P2H5 1018 aa10.08□□□□□ -0.8
SMPD3-210ENST00000567811 CPDO75976 1380 aa10.08□□□□□ -0.8
SMPD3-210ENST00000567811 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
SMPD3-210ENST00000567811 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
SMPD3-210ENST00000567811 RGPD5Q99666 1765 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 SOX12O15370 315 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 SF3B2Q13435 895 aaKnown RBP10.06□□□□□ -0.8
SMPD3-210ENST00000567811 CDCA8Q53HL2 280 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 ARHGEF25Q86VW2 580 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 TCP11L2Q8N4U5 519 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 ZRANB1Q9UGI0 708 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
SMPD3-210ENST00000567811 THRAP3Q9Y2W1 955 aaKnown RBP10.06□□□□□ -0.8
SMPD3-210ENST00000567811 AATKQ6ZMQ8 1374 aa10.05□□□□□ -0.8
SMPD3-210ENST00000567811 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
SMPD3-210ENST00000567811 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
SMPD3-210ENST00000567811 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
SMPD3-210ENST00000567811 TOM1L2Q6ZVM7 507 aa10.04□□□□□ -0.8
SMPD3-210ENST00000567811 NME9Q86XW9 330 aa10.04□□□□□ -0.8
SMPD3-210ENST00000567811 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
SMPD3-210ENST00000567811 USP31Q70CQ4 1352 aa10.03□□□□□ -0.8
SMPD3-210ENST00000567811 USP47Q96K76 1375 aa10.03□□□□□ -0.8
SMPD3-210ENST00000567811 PIK3C2AO00443 1686 aa10.03□□□□□ -0.8
SMPD3-210ENST00000567811 FAM196AQ6ZSG2 479 aa10.03□□□□□ -0.8
SMPD3-210ENST00000567811 NRKQ7Z2Y5 1582 aa10.03□□□□□ -0.8
SMPD3-210ENST00000567811 COL18A1P39060 1754 aa10.03□□□□□ -0.8
SMPD3-210ENST00000567811 CD163L1Q9NR16 1453 aa10.03□□□□□ -0.8
SMPD3-210ENST00000567811 NINLQ9Y2I6 1382 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms