RNA–Protein interactions for RNA: ENST00000567178.1

ITGAM-206, Transcript of integrin subunit alpha M, humanhuman

TSL 5

Gene ITGAM, Length 378 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-206ENST00000567178 DDX10Q13206 875 aaKnown RBP6.25□□□□□ -1.41
ITGAM-206ENST00000567178 CDCA8Q53HL2 280 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 ESCO1Q5FWF5 840 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 PANK3Q9H999 370 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 SBNO1A3KN83 1393 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 USP31Q70CQ4 1352 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 SLIT3O75094 1523 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 OVOS2A0A0J9YW53 1432 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 OVOS2Q6IE36 1432 aa6.25□□□□□ -1.41
ITGAM-206ENST00000567178 EDC4Q6P2E9 1401 aaKnown RBP6.25□□□□□ -1.41
ITGAM-206ENST00000567178 BRD4O60885 1362 aaPredicted RBP6.24□□□□□ -1.41
ITGAM-206ENST00000567178 NPC1L1Q9UHC9 1359 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 FYB1O15117 783 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 PLEKHG5O94827 1062 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 XPCQ01831 940 aaPredicted RBP6.24□□□□□ -1.41
ITGAM-206ENST00000567178 ZRANB1Q9UGI0 708 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 PHRF1Q9P1Y6 1649 aaKnown RBP6.24□□□□□ -1.41
ITGAM-206ENST00000567178 NFAT5O94916 1531 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 NSD3Q9BZ95 1437 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 SPATA31A3Q5VYP0 1347 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 TTC21BQ7Z4L5 1316 aa6.24□□□□□ -1.41
ITGAM-206ENST00000567178 COL18A1P39060 1754 aa6.23□□□□□ -1.41
ITGAM-206ENST00000567178 SHPRHQ149N8 1683 aa6.23□□□□□ -1.41
ITGAM-206ENST00000567178 KTN1Q86UP2 1357 aaKnown RBP6.23□□□□□ -1.41
ITGAM-206ENST00000567178 UBAP1LF5GYI3 381 aa6.23□□□□□ -1.41
ITGAM-206ENST00000567178 TOM1O60784 492 aa6.23□□□□□ -1.41
ITGAM-206ENST00000567178 TMC1Q8TDI8 760 aa6.23□□□□□ -1.41
ITGAM-206ENST00000567178 ZNF692Q9BU19 519 aaPredicted RBP6.23□□□□□ -1.41
ITGAM-206ENST00000567178 TNS3Q68CZ2 1445 aa6.23□□□□□ -1.41
ITGAM-206ENST00000567178 USP19O94966 1318 aa6.23□□□□□ -1.41
ITGAM-206ENST00000567178 PEAK1Q9H792 1746 aa6.22□□□□□ -1.41
ITGAM-206ENST00000567178 KRT28Q7Z3Y7 464 aa6.22□□□□□ -1.41
ITGAM-206ENST00000567178 NME9Q86XW9 330 aa6.22□□□□□ -1.41
ITGAM-206ENST00000567178 RTN4Q9NQC3 1192 aaKnown RBP6.22□□□□□ -1.41
ITGAM-206ENST00000567178 NPHP3Q7Z494 1330 aa6.22□□□□□ -1.41
ITGAM-206ENST00000567178 PNPLA6Q8IY17 1366 aa6.21□□□□□ -1.41
ITGAM-206ENST00000567178 PARD3Q8TEW0 1356 aa6.21□□□□□ -1.41
ITGAM-206ENST00000567178 LMO7Q8WWI1 1683 aa6.21□□□□□ -1.42
ITGAM-206ENST00000567178 MAP2P11137 1827 aaKnown RBP6.21□□□□□ -1.42
ITGAM-206ENST00000567178 HSPA1LP34931 641 aa6.21□□□□□ -1.42
ITGAM-206ENST00000567178 TERF2IPQ9NYB0 399 aa6.21□□□□□ -1.42
ITGAM-206ENST00000567178 TTC21AQ8NDW8 1320 aa6.21□□□□□ -1.42
ITGAM-206ENST00000567178 LRP6O75581 1613 aa6.21□□□□□ -1.42
ITGAM-206ENST00000567178 SMG6Q86US8 1419 aaKnown RBP6.2□□□□□ -1.42
ITGAM-206ENST00000567178 FBLN1P23142 703 aa6.2□□□□□ -1.42
ITGAM-206ENST00000567178 PIP4K2BP78356 416 aa6.2□□□□□ -1.42
ITGAM-206ENST00000567178 NGDNQ8NEJ9 315 aaKnown RBP6.2□□□□□ -1.42
ITGAM-206ENST00000567178 LTN1O94822 1766 aa6.2□□□□□ -1.42
ITGAM-206ENST00000567178 RGPD5Q99666 1765 aa6.2□□□□□ -1.42
ITGAM-206ENST00000567178 PSME1Q06323 249 aa6.19□□□□□ -1.42
ITGAM-206ENST00000567178 HDGFL2Q7Z4V5 671 aaPredicted RBP6.19□□□□□ -1.42
ITGAM-206ENST00000567178 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.19□□□□□ -1.42
ITGAM-206ENST00000567178 FBXO41Q8TF61 875 aa6.19□□□□□ -1.42
ITGAM-206ENST00000567178 GGNBP2Q9H3C7 697 aa6.19□□□□□ -1.42
ITGAM-206ENST00000567178 COL3A1P02461 1466 aaPredicted RBP6.19□□□□□ -1.42
ITGAM-206ENST00000567178 SCAF1Q9H7N4 1312 aaKnown RBP6.19□□□□□ -1.42
ITGAM-206ENST00000567178 NSD2O96028 1365 aa6.18□□□□□ -1.42
ITGAM-206ENST00000567178 AATKQ6ZMQ8 1374 aa6.18□□□□□ -1.42
ITGAM-206ENST00000567178 PRKCSHP14314 528 aaPredicted RBP6.18□□□□□ -1.42
ITGAM-206ENST00000567178 DIEXFQ68CQ4 756 aaKnown RBP6.18□□□□□ -1.42
ITGAM-206ENST00000567178 CABLES1Q8TDN4 633 aa6.18□□□□□ -1.42
ITGAM-206ENST00000567178 RGPD1P0DJD0 1748 aa6.18□□□□□ -1.42
ITGAM-206ENST00000567178 CGNL1Q0VF96 1302 aa6.18□□□□□ -1.42
ITGAM-206ENST00000567178 ARHGEF10O15013 1369 aa6.18□□□□□ -1.42
ITGAM-206ENST00000567178 CPDO75976 1380 aa6.18□□□□□ -1.42
ITGAM-206ENST00000567178 CAMTA1Q9Y6Y1 1673 aa6.17□□□□□ -1.42
ITGAM-206ENST00000567178 NRAPQ86VF7 1730 aa6.17□□□□□ -1.42
ITGAM-206ENST00000567178 CCDC184Q52MB2 194 aa6.17□□□□□ -1.42
ITGAM-206ENST00000567178 NUTM2GQ5VZR2 741 aa6.17□□□□□ -1.42
ITGAM-206ENST00000567178 ABTB2Q8N961 1025 aa6.17□□□□□ -1.42
ITGAM-206ENST00000567178 LRRC59Q96AG4 307 aaKnown RBP6.17□□□□□ -1.42
ITGAM-206ENST00000567178 PRKRIP1Q9H875 184 aaPredicted RBP6.17□□□□□ -1.42
ITGAM-206ENST00000567178 INSRP06213 1382 aa6.17□□□□□ -1.42
ITGAM-206ENST00000567178 PLCH1Q4KWH8 1693 aa6.17□□□□□ -1.42
ITGAM-206ENST00000567178 RGPD2P0DJD1 1756 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 ABCC6O95255 1503 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 SOX12O15370 315 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 GCP02774 474 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 PPP2R1AP30153 589 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 NLRP6P59044 892 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 CC2D1BQ5T0F9 858 aaKnown RBP6.16□□□□□ -1.42
ITGAM-206ENST00000567178 ARHGEF25Q86VW2 580 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 POLKQ9UBT6 870 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 AXIN2Q9Y2T1 843 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 KNSTRNQ9Y448 316 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 MAP3K19Q56UN5 1328 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 JCADQ9P266 1359 aa6.16□□□□□ -1.42
ITGAM-206ENST00000567178 SLIT2O94813 1529 aa6.15□□□□□ -1.42
ITGAM-206ENST00000567178 FAM208AQ9UK61 1670 aaKnown RBP6.15□□□□□ -1.42
ITGAM-206ENST00000567178 FAM83GA6ND36 823 aa6.15□□□□□ -1.42
ITGAM-206ENST00000567178 PAK3O75914 559 aaPredicted RBP6.15□□□□□ -1.42
ITGAM-206ENST00000567178 TNNT2P45379 298 aaPredicted RBP6.15□□□□□ -1.42
ITGAM-206ENST00000567178 NLRP13Q86W25 1043 aa6.15□□□□□ -1.42
ITGAM-206ENST00000567178 NWD2Q9ULI1 1742 aa6.15□□□□□ -1.42
ITGAM-206ENST00000567178 COL14A1Q05707 1796 aaKnown RBP6.15□□□□□ -1.43
ITGAM-206ENST00000567178 KIAA0232Q92628 1395 aa6.15□□□□□ -1.43
ITGAM-206ENST00000567178 NCAPD2Q15021 1401 aa6.15□□□□□ -1.43
ITGAM-206ENST00000567178 BCL9LQ86UU0 1499 aa6.15□□□□□ -1.43
ITGAM-206ENST00000567178 CDK12Q9NYV4 1490 aaPredicted RBP6.15□□□□□ -1.43
ITGAM-206ENST00000567178 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms