RNA–Protein interactions for RNA: ENST00000566540.5

PMM2-211, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-211ENST00000566540 FOXO3O43524 673 aa20.65■□□□□ 0.9
PMM2-211ENST00000566540 BRINP3Q76B58 766 aa20.65■□□□□ 0.9
PMM2-211ENST00000566540 NME9Q86XW9 330 aa20.65■□□□□ 0.9
PMM2-211ENST00000566540 GGNBP2Q9H3C7 697 aa20.65■□□□□ 0.9
PMM2-211ENST00000566540 BRD4O60885 1362 aaPredicted RBP20.64■□□□□ 0.89
PMM2-211ENST00000566540 ZRANB1Q9UGI0 708 aa20.63■□□□□ 0.89
PMM2-211ENST00000566540 TTC21AQ8NDW8 1320 aa20.63■□□□□ 0.89
PMM2-211ENST00000566540 TRPM3Q9HCF6 1732 aaPredicted RBP20.62■□□□□ 0.89
PMM2-211ENST00000566540 MYBBP1AQ9BQG0 1328 aaKnown RBP20.62■□□□□ 0.89
PMM2-211ENST00000566540 CCER2I3L3R5 266 aa20.62■□□□□ 0.89
PMM2-211ENST00000566540 PSME1Q06323 249 aa20.62■□□□□ 0.89
PMM2-211ENST00000566540 PIK3C2AO00443 1686 aa20.62■□□□□ 0.89
PMM2-211ENST00000566540 CCDC184Q52MB2 194 aa20.61■□□□□ 0.89
PMM2-211ENST00000566540 MORC1Q86VD1 984 aa20.61■□□□□ 0.89
PMM2-211ENST00000566540 DDX17Q92841 729 aaKnown RBP20.61■□□□□ 0.89
PMM2-211ENST00000566540 XPCQ01831 940 aaPredicted RBP20.6■□□□□ 0.89
PMM2-211ENST00000566540 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
PMM2-211ENST00000566540 KRT28Q7Z3Y7 464 aa20.59■□□□□ 0.89
PMM2-211ENST00000566540 IQSEC2Q5JU85 1478 aa20.59■□□□□ 0.89
PMM2-211ENST00000566540 PXDNQ92626 1479 aa20.59■□□□□ 0.89
PMM2-211ENST00000566540 OVOS2A0A0J9YW53 1432 aa20.59■□□□□ 0.89
PMM2-211ENST00000566540 OVOS2Q6IE36 1432 aa20.59■□□□□ 0.89
PMM2-211ENST00000566540 MARF1Q9Y4F3 1742 aaKnown RBP20.58■□□□□ 0.89
PMM2-211ENST00000566540 USP31Q70CQ4 1352 aa20.58■□□□□ 0.89
PMM2-211ENST00000566540 USP54Q70EL1 1684 aa20.58■□□□□ 0.89
PMM2-211ENST00000566540 NPHP3Q7Z494 1330 aa20.57■□□□□ 0.88
PMM2-211ENST00000566540 NHSL1Q5SYE7 1610 aa20.57■□□□□ 0.88
PMM2-211ENST00000566540 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
PMM2-211ENST00000566540 PAK3O75914 559 aaPredicted RBP20.55■□□□□ 0.88
PMM2-211ENST00000566540 NLRP13Q86W25 1043 aa20.55■□□□□ 0.88
PMM2-211ENST00000566540 ALS2Q96Q42 1657 aa20.55■□□□□ 0.88
PMM2-211ENST00000566540 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
PMM2-211ENST00000566540 CERKQ8TCT0 537 aa20.55■□□□□ 0.88
PMM2-211ENST00000566540 COG3Q96JB2 828 aa20.55■□□□□ 0.88
PMM2-211ENST00000566540 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
PMM2-211ENST00000566540 SBNO1A3KN83 1393 aa20.54■□□□□ 0.88
PMM2-211ENST00000566540 ABTB2Q8N961 1025 aa20.53■□□□□ 0.88
PMM2-211ENST00000566540 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
PMM2-211ENST00000566540 NLRP6P59044 892 aa20.51■□□□□ 0.87
PMM2-211ENST00000566540 NUTM2GQ5VZR2 741 aa20.51■□□□□ 0.87
PMM2-211ENST00000566540 TOM1O60784 492 aa20.51■□□□□ 0.87
PMM2-211ENST00000566540 FBLN1P23142 703 aa20.51■□□□□ 0.87
PMM2-211ENST00000566540 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
PMM2-211ENST00000566540 AATKQ6ZMQ8 1374 aa20.5■□□□□ 0.87
PMM2-211ENST00000566540 TNS3Q68CZ2 1445 aa20.5■□□□□ 0.87
PMM2-211ENST00000566540 AHDC1Q5TGY3 1603 aaPredicted RBP20.5■□□□□ 0.87
PMM2-211ENST00000566540 SPATA31A3Q5VYP0 1347 aa20.49■□□□□ 0.87
PMM2-211ENST00000566540 UBAP1LF5GYI3 381 aa20.47■□□□□ 0.87
PMM2-211ENST00000566540 MTHFSP49914 203 aa20.46■□□□□ 0.87
PMM2-211ENST00000566540 POLKQ9UBT6 870 aa20.46■□□□□ 0.87
PMM2-211ENST00000566540 USP19O94966 1318 aa20.46■□□□□ 0.87
PMM2-211ENST00000566540 SMG6Q86US8 1419 aaKnown RBP20.46■□□□□ 0.87
PMM2-211ENST00000566540 SLIT3O75094 1523 aa20.46■□□□□ 0.87
PMM2-211ENST00000566540 MAP2P11137 1827 aaKnown RBP20.46■□□□□ 0.87
PMM2-211ENST00000566540 MED1Q15648 1581 aaPredicted RBP20.45■□□□□ 0.86
PMM2-211ENST00000566540 NFAT5O94916 1531 aa20.45■□□□□ 0.86
PMM2-211ENST00000566540 LMOD2Q6P5Q4 547 aa20.44■□□□□ 0.86
PMM2-211ENST00000566540 CRYBG1Q9Y4K1 1723 aa20.43■□□□□ 0.86
PMM2-211ENST00000566540 PIP4K2BP78356 416 aa20.43■□□□□ 0.86
PMM2-211ENST00000566540 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
PMM2-211ENST00000566540 EMILIN1Q9Y6C2 1016 aa20.43■□□□□ 0.86
PMM2-211ENST00000566540 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
PMM2-211ENST00000566540 ARHGEF10O15013 1369 aa20.43■□□□□ 0.86
PMM2-211ENST00000566540 RRS1Q15050 365 aaKnown RBP20.42■□□□□ 0.86
PMM2-211ENST00000566540 PEAK1Q9H792 1746 aa20.42■□□□□ 0.86
PMM2-211ENST00000566540 PNPLA6Q8IY17 1366 aa20.42■□□□□ 0.86
PMM2-211ENST00000566540 SOX12O15370 315 aa20.42■□□□□ 0.86
PMM2-211ENST00000566540 PHRF1Q9P1Y6 1649 aaKnown RBP20.41■□□□□ 0.86
PMM2-211ENST00000566540 PHLPP1O60346 1717 aa20.4■□□□□ 0.86
PMM2-211ENST00000566540 INSRP06213 1382 aa20.4■□□□□ 0.86
PMM2-211ENST00000566540 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
PMM2-211ENST00000566540 SHPRHQ149N8 1683 aa20.4■□□□□ 0.86
PMM2-211ENST00000566540 MAP3K19Q56UN5 1328 aa20.39■□□□□ 0.86
PMM2-211ENST00000566540 CDK12Q9NYV4 1490 aaPredicted RBP20.39■□□□□ 0.85
PMM2-211ENST00000566540 GCP02774 474 aa20.38■□□□□ 0.85
PMM2-211ENST00000566540 KCNH5Q8NCM2 988 aa20.38■□□□□ 0.85
PMM2-211ENST00000566540 PLEKHG5O94827 1062 aa20.37■□□□□ 0.85
PMM2-211ENST00000566540 CABLES1Q8TDN4 633 aa20.37■□□□□ 0.85
PMM2-211ENST00000566540 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
PMM2-211ENST00000566540 FAM9BQ8IZU0 186 aa20.36■□□□□ 0.85
PMM2-211ENST00000566540 LRRC59Q96AG4 307 aaKnown RBP20.36■□□□□ 0.85
PMM2-211ENST00000566540 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
PMM2-211ENST00000566540 LTN1O94822 1766 aa20.36■□□□□ 0.85
PMM2-211ENST00000566540 ABCA3Q99758 1704 aa20.36■□□□□ 0.85
PMM2-211ENST00000566540 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
PMM2-211ENST00000566540 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
PMM2-211ENST00000566540 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
PMM2-211ENST00000566540 FLT4P35916 1363 aa20.32■□□□□ 0.84
PMM2-211ENST00000566540 RTL1A6NKG5 1358 aa20.31■□□□□ 0.84
PMM2-211ENST00000566540 HOXC9P31274 260 aa20.31■□□□□ 0.84
PMM2-211ENST00000566540 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
PMM2-211ENST00000566540 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
PMM2-211ENST00000566540 DIAPH1O60610 1272 aaKnown RBP20.3■□□□□ 0.84
PMM2-211ENST00000566540 IL13P35225 146 aa20.3■□□□□ 0.84
PMM2-211ENST00000566540 AMPHP49418 695 aa20.3■□□□□ 0.84
PMM2-211ENST00000566540 ZC3H6P61129 1189 aaKnown RBP20.29■□□□□ 0.84
PMM2-211ENST00000566540 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
PMM2-211ENST00000566540 IP6K1Q92551 441 aa20.29■□□□□ 0.84
PMM2-211ENST00000566540 CPDO75976 1380 aa20.28■□□□□ 0.84
PMM2-211ENST00000566540 COL18A1P39060 1754 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms