RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 MINK1Q8N4C8 1332 aaPredicted RBP29.83■■■□□ 2.37
PDXDC1-213ENST00000566426 NGDNQ8NEJ9 315 aaKnown RBP29.83■■■□□ 2.37
PDXDC1-213ENST00000566426 PAK3O75914 559 aaPredicted RBP29.82■■■□□ 2.36
PDXDC1-213ENST00000566426 PRDM11Q9NQV5 511 aa29.82■■■□□ 2.36
PDXDC1-213ENST00000566426 ALS2Q96Q42 1657 aa29.82■■■□□ 2.36
PDXDC1-213ENST00000566426 WASLO00401 505 aaPredicted RBP29.81■■■□□ 2.36
PDXDC1-213ENST00000566426 RGPD1P0DJD0 1748 aa29.8■■■□□ 2.36
PDXDC1-213ENST00000566426 PRR36Q9H6K5 1346 aa29.8■■■□□ 2.36
PDXDC1-213ENST00000566426 FAM182BQ5T319 152 aa29.79■■■□□ 2.36
PDXDC1-213ENST00000566426 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
PDXDC1-213ENST00000566426 ADGRB1O14514 1584 aa29.78■■■□□ 2.36
PDXDC1-213ENST00000566426 R3HDM1Q15032 1099 aaKnown RBP29.76■■■□□ 2.35
PDXDC1-213ENST00000566426 DISP2A7MBM2 1401 aa29.76■■■□□ 2.35
PDXDC1-213ENST00000566426 KDM2AQ9Y2K7 1162 aa29.74■■■□□ 2.35
PDXDC1-213ENST00000566426 FAM196AQ6ZSG2 479 aa29.73■■■□□ 2.35
PDXDC1-213ENST00000566426 STAC3Q96MF2 364 aa29.73■■■□□ 2.35
PDXDC1-213ENST00000566426 SPATA31A1Q5TZJ5 1347 aa29.72■■■□□ 2.35
PDXDC1-213ENST00000566426 THSD7AQ9UPZ6 1657 aa29.72■■■□□ 2.35
PDXDC1-213ENST00000566426 EZH2Q15910 746 aaKnown RBP29.71■■■□□ 2.35
PDXDC1-213ENST00000566426 DCAF11Q8TEB1 546 aa29.71■■■□□ 2.35
PDXDC1-213ENST00000566426 KIAA0232Q92628 1395 aa29.69■■■□□ 2.34
PDXDC1-213ENST00000566426 STRN4Q9NRL3 753 aa29.69■■■□□ 2.34
PDXDC1-213ENST00000566426 CRYBG1Q9Y4K1 1723 aa29.68■■■□□ 2.34
PDXDC1-213ENST00000566426 TRIM37O94972 964 aa29.68■■■□□ 2.34
PDXDC1-213ENST00000566426 CHRNA2Q15822 529 aa29.67■■■□□ 2.34
PDXDC1-213ENST00000566426 NUDT16Q96DE0 195 aaKnown RBP29.67■■■□□ 2.34
PDXDC1-213ENST00000566426 CAMKK2Q96RR4 588 aa29.67■■■□□ 2.34
PDXDC1-213ENST00000566426 PARD3Q8TEW0 1356 aa29.65■■■□□ 2.34
PDXDC1-213ENST00000566426 TNS1Q9HBL0 1735 aaKnown RBP29.65■■■□□ 2.34
PDXDC1-213ENST00000566426 APBA3O96018 575 aa29.65■■■□□ 2.34
PDXDC1-213ENST00000566426 EVA1CP58658 441 aa29.65■■■□□ 2.34
PDXDC1-213ENST00000566426 ATP7BP35670 1465 aa29.63■■■□□ 2.33
PDXDC1-213ENST00000566426 ZC3H6P61129 1189 aaKnown RBP29.63■■■□□ 2.33
PDXDC1-213ENST00000566426 PDE3BQ13370 1112 aa29.63■■■□□ 2.33
PDXDC1-213ENST00000566426 RAB3GAP2Q9H2M9 1393 aa29.63■■■□□ 2.33
PDXDC1-213ENST00000566426 ITSN1Q15811 1721 aa29.62■■■□□ 2.33
PDXDC1-213ENST00000566426 BARGINQ6ZT62 677 aa29.61■■■□□ 2.33
PDXDC1-213ENST00000566426 USP35Q9P2H5 1018 aa29.61■■■□□ 2.33
PDXDC1-213ENST00000566426 NUTM2GQ5VZR2 741 aa29.59■■■□□ 2.33
PDXDC1-213ENST00000566426 CDK19Q9BWU1 502 aa29.58■■■□□ 2.33
PDXDC1-213ENST00000566426 NBPF8Q3BBV2 869 aa29.57■■■□□ 2.32
PDXDC1-213ENST00000566426 NBPF14Q5TI25 921 aa29.57■■■□□ 2.32
PDXDC1-213ENST00000566426 PHRF1Q9P1Y6 1649 aaKnown RBP29.56■■■□□ 2.32
PDXDC1-213ENST00000566426 CCDC61Q9Y6R9 512 aa29.56■■■□□ 2.32
PDXDC1-213ENST00000566426 POLR3AO14802 1390 aaPredicted RBP29.55■■■□□ 2.32
PDXDC1-213ENST00000566426 ACEP12821 1306 aa29.55■■■□□ 2.32
PDXDC1-213ENST00000566426 SSH2Q76I76 1423 aa29.54■■■□□ 2.32
PDXDC1-213ENST00000566426 TCP11L2Q8N4U5 519 aa29.54■■■□□ 2.32
PDXDC1-213ENST00000566426 ABTB2Q8N961 1025 aa29.54■■■□□ 2.32
PDXDC1-213ENST00000566426 ARHGEF28Q8N1W1 1705 aaKnown RBP29.54■■■□□ 2.32
PDXDC1-213ENST00000566426 PLEKHG3A1L390 1219 aa29.52■■■□□ 2.32
PDXDC1-213ENST00000566426 THRAP3Q9Y2W1 955 aaKnown RBP29.52■■■□□ 2.32
PDXDC1-213ENST00000566426 LARP1Q6PKG0 1096 aaKnown RBP29.51■■■□□ 2.31
PDXDC1-213ENST00000566426 C11orf95C9JLR9 678 aaPredicted RBP29.5■■■□□ 2.31
PDXDC1-213ENST00000566426 CPDO75976 1380 aa29.5■■■□□ 2.31
PDXDC1-213ENST00000566426 NLRP13Q86W25 1043 aa29.47■■■□□ 2.31
PDXDC1-213ENST00000566426 CAMTA1Q9Y6Y1 1673 aa29.47■■■□□ 2.31
PDXDC1-213ENST00000566426 RREB1Q92766 1687 aa29.45■■■□□ 2.31
PDXDC1-213ENST00000566426 USP19O94966 1318 aa29.45■■■□□ 2.3
PDXDC1-213ENST00000566426 NRKQ7Z2Y5 1582 aa29.44■■■□□ 2.3
PDXDC1-213ENST00000566426 GCP02774 474 aa29.43■■■□□ 2.3
PDXDC1-213ENST00000566426 SPON1Q9HCB6 807 aa29.43■■■□□ 2.3
PDXDC1-213ENST00000566426 TOPAZ1Q8N9V7 1692 aa29.43■■■□□ 2.3
PDXDC1-213ENST00000566426 YY1P25490 414 aa29.42■■■□□ 2.3
PDXDC1-213ENST00000566426 PPP1R1BQ9UD71 204 aaPredicted RBP29.42■■■□□ 2.3
PDXDC1-213ENST00000566426 DCAF8L1A6NGE4 600 aa29.41■■■□□ 2.3
PDXDC1-213ENST00000566426 NUP188Q5SRE5 1749 aa29.41■■■□□ 2.3
PDXDC1-213ENST00000566426 LMO7Q8WWI1 1683 aa29.4■■■□□ 2.3
PDXDC1-213ENST00000566426 SRPK2P78362 688 aaKnown RBP29.39■■■□□ 2.3
PDXDC1-213ENST00000566426 KCNQ2O43526 872 aa29.38■■■□□ 2.29
PDXDC1-213ENST00000566426 BRD4O60885 1362 aaPredicted RBP29.38■■■□□ 2.29
PDXDC1-213ENST00000566426 COL5A2P05997 1499 aaPredicted RBP29.36■■■□□ 2.29
PDXDC1-213ENST00000566426 CRB1P82279 1406 aa29.36■■■□□ 2.29
PDXDC1-213ENST00000566426 PPIP5K1Q6PFW1 1433 aa29.35■■■□□ 2.29
PDXDC1-213ENST00000566426 PARP4Q9UKK3 1724 aaKnown RBP29.34■■■□□ 2.29
PDXDC1-213ENST00000566426 OVOS2A0A0G2JMS6 1433 aa29.34■■■□□ 2.29
PDXDC1-213ENST00000566426 OVOS2A0A0J9YW53 1432 aa29.34■■■□□ 2.29
PDXDC1-213ENST00000566426 OVOS2Q6IE36 1432 aa29.34■■■□□ 2.29
PDXDC1-213ENST00000566426 KIAA1210Q9ULL0 1709 aa29.33■■■□□ 2.29
PDXDC1-213ENST00000566426 NINLQ9Y2I6 1382 aa29.32■■■□□ 2.28
PDXDC1-213ENST00000566426 ZBTB7CA1YPR0 619 aa29.32■■■□□ 2.28
PDXDC1-213ENST00000566426 PLSCR1O15162 318 aa29.32■■■□□ 2.28
PDXDC1-213ENST00000566426 DDB1Q16531 1140 aa29.31■■■□□ 2.28
PDXDC1-213ENST00000566426 AATKQ6ZMQ8 1374 aa29.3■■■□□ 2.28
PDXDC1-213ENST00000566426 CENPJQ9HC77 1338 aaPredicted RBP29.3■■■□□ 2.28
PDXDC1-213ENST00000566426 NLRP6P59044 892 aa29.3■■■□□ 2.28
PDXDC1-213ENST00000566426 NBPF1Q3BBV0 1214 aa29.3■■■□□ 2.28
PDXDC1-213ENST00000566426 CABP2Q9NPB3 220 aa29.3■■■□□ 2.28
PDXDC1-213ENST00000566426 TOM1L2Q6ZVM7 507 aa29.28■■■□□ 2.28
PDXDC1-213ENST00000566426 BCL11BQ9C0K0 894 aaPredicted RBP29.27■■■□□ 2.28
PDXDC1-213ENST00000566426 CABP1Q9NZU7 370 aa29.25■■■□□ 2.27
PDXDC1-213ENST00000566426 USP6P35125 1406 aa29.24■■■□□ 2.27
PDXDC1-213ENST00000566426 CDCA7Q9BWT1 371 aaPredicted RBP29.24■■■□□ 2.27
PDXDC1-213ENST00000566426 RGPD3A6NKT7 1758 aaPredicted RBP29.24■■■□□ 2.27
PDXDC1-213ENST00000566426 RGPD4Q7Z3J3 1758 aa29.24■■■□□ 2.27
PDXDC1-213ENST00000566426 PEAK1Q9H792 1746 aa29.23■■■□□ 2.27
PDXDC1-213ENST00000566426 SLIT3O75094 1523 aa29.2■■■□□ 2.27
PDXDC1-213ENST00000566426 SBF2Q86WG5 1849 aa29.2■■■□□ 2.26
PDXDC1-213ENST00000566426 WDR17Q8IZU2 1322 aa29.2■■■□□ 2.26
PDXDC1-213ENST00000566426 LRRC37A3O60309 1634 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms