RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 CDK19Q9BWU1 502 aa19.28■□□□□ 0.68
HACD3-208ENST00000566239 PHRF1Q9P1Y6 1649 aaKnown RBP19.28■□□□□ 0.68
HACD3-208ENST00000566239 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
HACD3-208ENST00000566239 NBPF1Q3BBV0 1214 aa19.26■□□□□ 0.67
HACD3-208ENST00000566239 TRPM1Q7Z4N2 1603 aa19.25■□□□□ 0.67
HACD3-208ENST00000566239 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
HACD3-208ENST00000566239 POLR3AO14802 1390 aaPredicted RBP19.23■□□□□ 0.67
HACD3-208ENST00000566239 SEPT12Q8IYM1 358 aa19.23■□□□□ 0.67
HACD3-208ENST00000566239 BTG4Q9NY30 223 aa19.23■□□□□ 0.67
HACD3-208ENST00000566239 CENPJQ9HC77 1338 aaPredicted RBP19.23■□□□□ 0.67
HACD3-208ENST00000566239 ONECUT3O60422 494 aaPredicted RBP19.21■□□□□ 0.67
HACD3-208ENST00000566239 EP400Q96L91 3159 aa19.21■□□□□ 0.67
HACD3-208ENST00000566239 ACEP12821 1306 aa19.21■□□□□ 0.67
HACD3-208ENST00000566239 BLMP54132 1417 aaPredicted RBP19.2■□□□□ 0.66
HACD3-208ENST00000566239 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
HACD3-208ENST00000566239 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
HACD3-208ENST00000566239 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
HACD3-208ENST00000566239 A0A0G2JS52 829 aa19.19■□□□□ 0.66
HACD3-208ENST00000566239 PLEKHG3A1L390 1219 aa19.19■□□□□ 0.66
HACD3-208ENST00000566239 MYT1Q01538 1121 aa19.19■□□□□ 0.66
HACD3-208ENST00000566239 NBPF8Q3BBV2 869 aa19.19■□□□□ 0.66
HACD3-208ENST00000566239 PPIP5K1Q6PFW1 1433 aa19.18■□□□□ 0.66
HACD3-208ENST00000566239 KRT27Q7Z3Y8 459 aa19.18■□□□□ 0.66
HACD3-208ENST00000566239 SF3B2Q13435 895 aaKnown RBP19.17■□□□□ 0.66
HACD3-208ENST00000566239 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
HACD3-208ENST00000566239 NRKQ7Z2Y5 1582 aa19.16■□□□□ 0.66
HACD3-208ENST00000566239 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
HACD3-208ENST00000566239 ZRANB1Q9UGI0 708 aa19.16■□□□□ 0.66
HACD3-208ENST00000566239 KIAA0232Q92628 1395 aa19.16■□□□□ 0.66
HACD3-208ENST00000566239 RGPD1P0DJD0 1748 aa19.15■□□□□ 0.66
HACD3-208ENST00000566239 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
HACD3-208ENST00000566239 ABTB2Q8N961 1025 aa19.15■□□□□ 0.66
HACD3-208ENST00000566239 THSD7AQ9UPZ6 1657 aa19.14■□□□□ 0.66
HACD3-208ENST00000566239 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
HACD3-208ENST00000566239 CABP2Q9NPB3 220 aa19.14■□□□□ 0.65
HACD3-208ENST00000566239 SPATA31A5Q5VU36 1347 aa19.14■□□□□ 0.65
HACD3-208ENST00000566239 SPATA31A7Q8IWB4 1347 aa19.14■□□□□ 0.65
HACD3-208ENST00000566239 BRD4O60885 1362 aaPredicted RBP19.13■□□□□ 0.65
HACD3-208ENST00000566239 ROCK2O75116 1388 aaKnown RBP19.12■□□□□ 0.65
HACD3-208ENST00000566239 ZC3H6P61129 1189 aaKnown RBP19.12■□□□□ 0.65
HACD3-208ENST00000566239 AKAP12Q02952 1782 aa19.11■□□□□ 0.65
HACD3-208ENST00000566239 EVC2Q86UK5 1308 aa19.11■□□□□ 0.65
HACD3-208ENST00000566239 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
HACD3-208ENST00000566239 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
HACD3-208ENST00000566239 LMO7Q8WWI1 1683 aa19.11■□□□□ 0.65
HACD3-208ENST00000566239 STRN4Q9NRL3 753 aa19.1■□□□□ 0.65
HACD3-208ENST00000566239 USP6P35125 1406 aa19.08■□□□□ 0.65
HACD3-208ENST00000566239 USP19O94966 1318 aa19.08■□□□□ 0.65
HACD3-208ENST00000566239 SPATA31A1Q5TZJ5 1347 aa19.08■□□□□ 0.65
HACD3-208ENST00000566239 EVA1CP58658 441 aa19.08■□□□□ 0.64
HACD3-208ENST00000566239 CABP1Q9NZU7 370 aa19.08■□□□□ 0.64
HACD3-208ENST00000566239 CPDO75976 1380 aa19.07■□□□□ 0.64
HACD3-208ENST00000566239 DEFB132Q7Z7B7 95 aa19.07■□□□□ 0.64
HACD3-208ENST00000566239 PIK3C2AO00443 1686 aa19.07■□□□□ 0.64
HACD3-208ENST00000566239 CAMTA1Q9Y6Y1 1673 aa19.07■□□□□ 0.64
HACD3-208ENST00000566239 TNS1Q9HBL0 1735 aaKnown RBP19.06■□□□□ 0.64
HACD3-208ENST00000566239 SSH2Q76I76 1423 aa19.06■□□□□ 0.64
HACD3-208ENST00000566239 BAG6P46379 1132 aa19.05■□□□□ 0.64
HACD3-208ENST00000566239 GCP02774 474 aa19.04■□□□□ 0.64
HACD3-208ENST00000566239 SLIT3O75094 1523 aa19.04■□□□□ 0.64
HACD3-208ENST00000566239 NLRP6P59044 892 aa19.03■□□□□ 0.64
HACD3-208ENST00000566239 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
HACD3-208ENST00000566239 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
HACD3-208ENST00000566239 PARP4Q9UKK3 1724 aaKnown RBP19.02■□□□□ 0.63
HACD3-208ENST00000566239 RGPD5Q99666 1765 aa19.01■□□□□ 0.63
HACD3-208ENST00000566239 FAM182BQ5T319 152 aa19.01■□□□□ 0.63
HACD3-208ENST00000566239 BARGINQ6ZT62 677 aa19.01■□□□□ 0.63
HACD3-208ENST00000566239 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
HACD3-208ENST00000566239 TONSLQ96HA7 1378 aa19.01■□□□□ 0.63
HACD3-208ENST00000566239 COL5A2P05997 1499 aaPredicted RBP19■□□□□ 0.63
HACD3-208ENST00000566239 WNK3Q9BYP7 1800 aa19■□□□□ 0.63
HACD3-208ENST00000566239 COL18A1P39060 1754 aa18.99■□□□□ 0.63
HACD3-208ENST00000566239 SBNO2Q9Y2G9 1366 aa18.99■□□□□ 0.63
HACD3-208ENST00000566239 LARP1Q6PKG0 1096 aaKnown RBP18.99■□□□□ 0.63
HACD3-208ENST00000566239 ZBTB7CA1YPR0 619 aa18.98■□□□□ 0.63
HACD3-208ENST00000566239 FAM196AQ6ZSG2 479 aa18.98■□□□□ 0.63
HACD3-208ENST00000566239 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
HACD3-208ENST00000566239 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
HACD3-208ENST00000566239 THRAP3Q9Y2W1 955 aaKnown RBP18.98■□□□□ 0.63
HACD3-208ENST00000566239 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
HACD3-208ENST00000566239 CRB1P82279 1406 aa18.97■□□□□ 0.63
HACD3-208ENST00000566239 TTC21AQ8NDW8 1320 aa18.97■□□□□ 0.63
HACD3-208ENST00000566239 AATKQ6ZMQ8 1374 aa18.96■□□□□ 0.63
HACD3-208ENST00000566239 DISP2A7MBM2 1401 aa18.96■□□□□ 0.63
HACD3-208ENST00000566239 TTC21BQ7Z4L5 1316 aa18.96■□□□□ 0.63
HACD3-208ENST00000566239 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
HACD3-208ENST00000566239 CPSF1Q10570 1443 aaKnown RBP18.95■□□□□ 0.62
HACD3-208ENST00000566239 EN1Q05925 392 aaPredicted RBP18.95■□□□□ 0.62
HACD3-208ENST00000566239 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
HACD3-208ENST00000566239 USP54Q70EL1 1684 aa18.95■□□□□ 0.62
HACD3-208ENST00000566239 LRP5O75197 1615 aa18.94■□□□□ 0.62
HACD3-208ENST00000566239 LTN1O94822 1766 aa18.93■□□□□ 0.62
HACD3-208ENST00000566239 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
HACD3-208ENST00000566239 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
HACD3-208ENST00000566239 TRIM37O94972 964 aa18.92■□□□□ 0.62
HACD3-208ENST00000566239 TRIM26Q12899 539 aaPredicted RBP18.91■□□□□ 0.62
HACD3-208ENST00000566239 RREB1Q92766 1687 aa18.91■□□□□ 0.62
HACD3-208ENST00000566239 TOM1L2Q6ZVM7 507 aa18.9■□□□□ 0.62
HACD3-208ENST00000566239 NFAT5O94916 1531 aa18.9■□□□□ 0.62
HACD3-208ENST00000566239 ABCC6O95255 1503 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms