RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 PPP4R3AQ6IN85 833 aa12.66□□□□□ -0.38
SNX29-205ENST00000566228 TNIP1Q15025 636 aa12.66□□□□□ -0.38
SNX29-205ENST00000566228 COG3Q96JB2 828 aa12.66□□□□□ -0.38
SNX29-205ENST00000566228 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
SNX29-205ENST00000566228 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNX29-205ENST00000566228 TRIM22Q8IYM9 498 aa12.65□□□□□ -0.38
SNX29-205ENST00000566228 PKNOX2Q96KN3 472 aa12.65□□□□□ -0.38
SNX29-205ENST00000566228 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
SNX29-205ENST00000566228 VPS37CA5D8V6 355 aaPredicted RBP12.65□□□□□ -0.38
SNX29-205ENST00000566228 KIF15Q9NS87 1388 aa12.65□□□□□ -0.38
SNX29-205ENST00000566228 FAM114A2Q9NRY5 505 aa12.65□□□□□ -0.39
SNX29-205ENST00000566228 ANKRD30AQ9BXX3 1397 aa12.64□□□□□ -0.39
SNX29-205ENST00000566228 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
SNX29-205ENST00000566228 FGFR1OPO95684 399 aaKnown RBP12.64□□□□□ -0.39
SNX29-205ENST00000566228 BMS1Q14692 1282 aaKnown RBP12.64□□□□□ -0.39
SNX29-205ENST00000566228 TRIM5Q9C035 493 aa12.64□□□□□ -0.39
SNX29-205ENST00000566228 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.64□□□□□ -0.396e-7■■■■□ 24.4
SNX29-205ENST00000566228 MPHOSPH10O00566 681 aaKnown RBP12.64□□□□□ -0.39
SNX29-205ENST00000566228 CDKL5O76039 1030 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 BAZ1AQ9NRL2 1556 aaPredicted RBP12.63□□□□□ -0.39
SNX29-205ENST00000566228 DAAM2Q86T65 1068 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 TAF4BQ92750 862 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 NASPP49321 788 aaPredicted RBP12.63□□□□□ -0.39
SNX29-205ENST00000566228 CCDC57Q2TAC2 916 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 FOXD4L5Q5VV16 416 aaPredicted RBP12.63□□□□□ -0.39
SNX29-205ENST00000566228 FOXD4L4Q8WXT5 416 aaPredicted RBP12.63□□□□□ -0.39
SNX29-205ENST00000566228 TSNARE1Q96NA8 513 aa12.63□□□□□ -0.39
SNX29-205ENST00000566228 DRC1Q96MC2 740 aa12.62□□□□□ -0.39
SNX29-205ENST00000566228 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
SNX29-205ENST00000566228 SF3B2Q13435 895 aaKnown RBP12.62□□□□□ -0.39
SNX29-205ENST00000566228 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
SNX29-205ENST00000566228 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
SNX29-205ENST00000566228 CCDC148Q8NFR7 591 aa12.62□□□□□ -0.39
SNX29-205ENST00000566228 NACAP1Q9BZK3 213 aa12.62□□□□□ -0.39
SNX29-205ENST00000566228 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
SNX29-205ENST00000566228 GGT6Q6P531 493 aa12.61□□□□□ -0.39
SNX29-205ENST00000566228 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
SNX29-205ENST00000566228 EFCAB2Q5VUJ9 269 aa12.61□□□□□ -0.39
SNX29-205ENST00000566228 MRE11P49959 708 aa12.61□□□□□ -0.39
SNX29-205ENST00000566228 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
SNX29-205ENST00000566228 CRACR2AQ9BSW2 395 aa12.61□□□□□ -0.39
SNX29-205ENST00000566228 RAB3IL1Q8TBN0 382 aa12.6□□□□□ -0.39
SNX29-205ENST00000566228 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
SNX29-205ENST00000566228 CNGA1P29973 690 aa12.6□□□□□ -0.39
SNX29-205ENST00000566228 ZSCAN25Q6NSZ9 544 aa12.6□□□□□ -0.39
SNX29-205ENST00000566228 CENPHQ9H3R5 247 aa12.6□□□□□ -0.39
SNX29-205ENST00000566228 CCDC6Q16204 474 aa12.6□□□□□ -0.39
SNX29-205ENST00000566228 COMMD10Q9Y6G5 202 aa12.6□□□□□ -0.39
SNX29-205ENST00000566228 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
SNX29-205ENST00000566228 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
SNX29-205ENST00000566228 CEP135Q66GS9 1140 aa12.59□□□□□ -0.39
SNX29-205ENST00000566228 SPECC1LQ69YQ0 1117 aa12.59□□□□□ -0.39
SNX29-205ENST00000566228 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
SNX29-205ENST00000566228 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
SNX29-205ENST00000566228 SEPT6Q14141 434 aa12.58□□□□□ -0.39
SNX29-205ENST00000566228 FAM114A1Q8IWE2 563 aa12.58□□□□□ -0.39
SNX29-205ENST00000566228 CCDC192P0DO97 292 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 AEBP1Q8IUX7 1158 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 CFAP45Q9UL16 551 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 MATR3P43243 847 aaKnown RBP eCLIP12.58□□□□□ -0.42e-6■■■■□ 22
SNX29-205ENST00000566228 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.49e-6■■■■■ 50.1
SNX29-205ENST00000566228 WASHC4Q2M389 1173 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 SERPINC1P01008 464 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 TTLL5Q6EMB2 1281 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 CEP131Q9UPN4 1083 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 WASF1Q92558 559 aa12.58□□□□□ -0.4
SNX29-205ENST00000566228 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
SNX29-205ENST00000566228 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
SNX29-205ENST00000566228 KIF20AO95235 890 aa12.57□□□□□ -0.4
SNX29-205ENST00000566228 CETN1Q12798 172 aa12.57□□□□□ -0.4
SNX29-205ENST00000566228 CCDC83Q8IWF9 413 aa12.57□□□□□ -0.4
SNX29-205ENST00000566228 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
SNX29-205ENST00000566228 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
SNX29-205ENST00000566228 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
SNX29-205ENST00000566228 KIF4AO95239 1232 aa12.56□□□□□ -0.4
SNX29-205ENST00000566228 PRPF31Q8WWY3 499 aaKnown RBP12.56□□□□□ -0.4
SNX29-205ENST00000566228 CCDC14Q49A88 953 aa12.56□□□□□ -0.4
SNX29-205ENST00000566228 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
SNX29-205ENST00000566228 NAA15Q9BXJ9 866 aaKnown RBP12.56□□□□□ -0.4
SNX29-205ENST00000566228 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
SNX29-205ENST00000566228 RRBP1Q9P2E9 1410 aaKnown RBP12.56□□□□□ -0.4
SNX29-205ENST00000566228 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
SNX29-205ENST00000566228 TTC12Q9H892 705 aaPredicted RBP12.56□□□□□ -0.4
SNX29-205ENST00000566228 TANGO6Q9C0B7 1094 aa12.56□□□□□ -0.4
SNX29-205ENST00000566228 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
SNX29-205ENST00000566228 RAB34Q9BZG1 259 aa12.56□□□□□ -0.4
SNX29-205ENST00000566228 KIAA1328Q86T90 577 aa12.55□□□□□ -0.4
SNX29-205ENST00000566228 FERMT2Q96AC1 680 aa12.55□□□□□ -0.4
SNX29-205ENST00000566228 FMN1Q68DA7 1419 aa12.55□□□□□ -0.4
SNX29-205ENST00000566228 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
SNX29-205ENST00000566228 TIGD1Q96MW7 591 aa12.55□□□□□ -0.4
SNX29-205ENST00000566228 MPHOSPH6Q99547 160 aaKnown RBP12.55□□□□□ -0.4
SNX29-205ENST00000566228 GSTTP1A0A1W2PQM5 241 aa12.55□□□□□ -0.4
SNX29-205ENST00000566228 LTV1Q96GA3 475 aaPredicted RBP12.55□□□□□ -0.4
SNX29-205ENST00000566228 FOXD4L6Q3SYB3 417 aaPredicted RBP12.54□□□□□ -0.4
SNX29-205ENST00000566228 FOXD4L3Q6VB84 417 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms