RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CCDC9Q9Y3X0 531 aaKnown RBP7.31□□□□□ -1.24
CAPN3-214ENST00000565274 ZNF326Q5BKZ1 582 aaKnown RBP7.3□□□□□ -1.24
CAPN3-214ENST00000565274 SALL2Q9Y467 1007 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-214ENST00000565274 AVPP01185 164 aa7.29□□□□□ -1.24
CAPN3-214ENST00000565274 MSS51Q4VC12 460 aa7.29□□□□□ -1.24
CAPN3-214ENST00000565274 CCDC24Q8N4L8 307 aa7.29□□□□□ -1.24
CAPN3-214ENST00000565274 KIF27Q86VH2 1401 aa7.28□□□□□ -1.24
CAPN3-214ENST00000565274 TRIM32Q13049 653 aa7.28□□□□□ -1.24
CAPN3-214ENST00000565274 Q3C1V9 767 aa7.28□□□□□ -1.24
CAPN3-214ENST00000565274 CRIPAKQ8N1N5 446 aa7.28□□□□□ -1.24
CAPN3-214ENST00000565274 CCDC136Q96JN2 1154 aa7.28□□□□□ -1.24
CAPN3-214ENST00000565274 CTC1Q2NKJ3 1217 aa7.27□□□□□ -1.25
CAPN3-214ENST00000565274 HLA-CQ95604 372 aa7.27□□□□□ -1.25
CAPN3-214ENST00000565274 CUX1P39880 1505 aa7.27□□□□□ -1.25
CAPN3-214ENST00000565274 MAP3K1Q13233 1512 aa7.27□□□□□ -1.25
CAPN3-214ENST00000565274 CUX2O14529 1486 aa7.26□□□□□ -1.25
CAPN3-214ENST00000565274 J3QL48 77 aa7.26□□□□□ -1.25
CAPN3-214ENST00000565274 WNT7AO00755 349 aa7.26□□□□□ -1.25
CAPN3-214ENST00000565274 KDM4AO75164 1064 aa7.26□□□□□ -1.25
CAPN3-214ENST00000565274 CD46P15529 392 aa7.26□□□□□ -1.25
CAPN3-214ENST00000565274 SMPD1P17405 629 aa7.26□□□□□ -1.25
CAPN3-214ENST00000565274 MDM2Q00987 491 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-214ENST00000565274 SNIP1Q8TAD8 396 aaKnown RBP7.26□□□□□ -1.25
CAPN3-214ENST00000565274 MRGPRX2Q96LB1 330 aa7.26□□□□□ -1.25
CAPN3-214ENST00000565274 WFS1O76024 890 aa7.25□□□□□ -1.25
CAPN3-214ENST00000565274 USB1Q9BQ65 265 aaKnown RBP7.25□□□□□ -1.25
CAPN3-214ENST00000565274 RRBP1Q9P2E9 1410 aaKnown RBP7.25□□□□□ -1.25
CAPN3-214ENST00000565274 ARAP1Q96P48 1450 aa7.24□□□□□ -1.25
CAPN3-214ENST00000565274 MMP16P51512 607 aa7.24□□□□□ -1.25
CAPN3-214ENST00000565274 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-214ENST00000565274 CADPSQ9ULU8 1353 aa7.23□□□□□ -1.25
CAPN3-214ENST00000565274 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
CAPN3-214ENST00000565274 GUCA2AQ02747 115 aa7.23□□□□□ -1.25
CAPN3-214ENST00000565274 MAP2K5Q13163 448 aa7.23□□□□□ -1.25
CAPN3-214ENST00000565274 POLR3GLQ9BT43 218 aa7.23□□□□□ -1.25
CAPN3-214ENST00000565274 IGF1RP08069 1367 aa7.22□□□□□ -1.25
CAPN3-214ENST00000565274 DXOO77932 396 aaKnown RBP7.22□□□□□ -1.25
CAPN3-214ENST00000565274 SNRPBP14678 240 aaKnown RBP7.22□□□□□ -1.25
CAPN3-214ENST00000565274 HPS1Q92902 700 aa7.22□□□□□ -1.25
CAPN3-214ENST00000565274 ATP13A2Q9NQ11 1180 aa7.22□□□□□ -1.25
CAPN3-214ENST00000565274 CC2D2AQ9P2K1 1620 aa7.22□□□□□ -1.25
CAPN3-214ENST00000565274 IRF6O14896 467 aa7.21□□□□□ -1.26
CAPN3-214ENST00000565274 RC3H1Q5TC82 1133 aaKnown RBP7.21□□□□□ -1.26
CAPN3-214ENST00000565274 TICAM2Q86XR7 235 aa7.21□□□□□ -1.26
CAPN3-214ENST00000565274 SYMPKQ92797 1274 aaKnown RBP7.21□□□□□ -1.26
CAPN3-214ENST00000565274 IRX6P78412 446 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-214ENST00000565274 SKOR1P84550 965 aa7.2□□□□□ -1.26
CAPN3-214ENST00000565274 ERICH6BQ5W0A0 696 aa7.2□□□□□ -1.26
CAPN3-214ENST00000565274 ARHGAP35Q9NRY4 1499 aa7.19□□□□□ -1.26
CAPN3-214ENST00000565274 PRDM2Q13029 1718 aa7.19□□□□□ -1.26
CAPN3-214ENST00000565274 HOXA2O43364 376 aa7.19□□□□□ -1.26
CAPN3-214ENST00000565274 USP46P62068 366 aa7.19□□□□□ -1.26
CAPN3-214ENST00000565274 NFX1Q12986 1120 aaKnown RBP7.19□□□□□ -1.26
CAPN3-214ENST00000565274 NAP1L5Q96NT1 182 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-214ENST00000565274 REPIN1Q9BWE0 567 aaKnown RBP7.19□□□□□ -1.26
CAPN3-214ENST00000565274 DHX57Q6P158 1386 aaKnown RBP7.19□□□□□ -1.26
CAPN3-214ENST00000565274 ALDH1A1P00352 501 aa7.18□□□□□ -1.26
CAPN3-214ENST00000565274 BRPF3Q9ULD4 1205 aa7.18□□□□□ -1.26
CAPN3-214ENST00000565274 A0A0U1RQG5 324 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-214ENST00000565274 RBM10P98175 930 aaKnown RBP7.17□□□□□ -1.26
CAPN3-214ENST00000565274 NUTM1Q86Y26 1132 aa7.17□□□□□ -1.26
CAPN3-214ENST00000565274 KRI1Q8N9T8 703 aaKnown RBP7.17□□□□□ -1.26
CAPN3-214ENST00000565274 CCDC102AQ96A19 550 aa7.17□□□□□ -1.26
CAPN3-214ENST00000565274 SENP2Q9HC62 589 aa7.17□□□□□ -1.26
CAPN3-214ENST00000565274 MINK1Q8N4C8 1332 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-214ENST00000565274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.17□□□□□ -1.26
CAPN3-214ENST00000565274 JUNDP17535 347 aa7.16□□□□□ -1.26
CAPN3-214ENST00000565274 TRIM47Q96LD4 638 aa7.16□□□□□ -1.26
CAPN3-214ENST00000565274 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-214ENST00000565274 CARMIL1Q5VZK9 1371 aa7.16□□□□□ -1.26
CAPN3-214ENST00000565274 CCNB3Q8WWL7 1395 aa7.16□□□□□ -1.26
CAPN3-214ENST00000565274 TERTO14746 1132 aaKnown RBP7.15□□□□□ -1.26
CAPN3-214ENST00000565274 WNT7BP56706 349 aa7.15□□□□□ -1.26
CAPN3-214ENST00000565274 KANK4Q5T7N3 995 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-214ENST00000565274 PTCRAQ6ISU1 281 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-214ENST00000565274 NUDT12Q9BQG2 462 aa7.15□□□□□ -1.26
CAPN3-214ENST00000565274 GPCPD1Q9NPB8 672 aa7.15□□□□□ -1.26
CAPN3-214ENST00000565274 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
CAPN3-214ENST00000565274 FHAD1B1AJZ9 1412 aa7.14□□□□□ -1.27
CAPN3-214ENST00000565274 C6orf229H3BNL8 230 aa7.14□□□□□ -1.27
CAPN3-214ENST00000565274 AQRO60306 1485 aaKnown RBP eCLIP7.14□□□□□ -1.27
CAPN3-214ENST00000565274 CLCN1P35523 988 aa7.14□□□□□ -1.27
CAPN3-214ENST00000565274 EHBP1Q8NDI1 1231 aa7.14□□□□□ -1.27
CAPN3-214ENST00000565274 FAM217BQ9NTX9 383 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-214ENST00000565274 ABCA10Q8WWZ4 1543 aa7.13□□□□□ -1.27
CAPN3-214ENST00000565274 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
CAPN3-214ENST00000565274 ZNF592Q92610 1267 aa7.13□□□□□ -1.27
CAPN3-214ENST00000565274 KIFC2Q96AC6 838 aa7.13□□□□□ -1.27
CAPN3-214ENST00000565274 YTHDC1Q96MU7 727 aaKnown RBP7.13□□□□□ -1.27
CAPN3-214ENST00000565274 WASF2Q9Y6W5 498 aa7.13□□□□□ -1.27
CAPN3-214ENST00000565274 FGD5Q6ZNL6 1462 aa7.12□□□□□ -1.27
CAPN3-214ENST00000565274 CLSTN1O94985 981 aa7.12□□□□□ -1.27
CAPN3-214ENST00000565274 FDX1P10109 184 aa7.12□□□□□ -1.27
CAPN3-214ENST00000565274 BMP1P13497 986 aa7.12□□□□□ -1.27
CAPN3-214ENST00000565274 INSM1Q01101 510 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-214ENST00000565274 RETREG3Q86VR2 466 aa7.12□□□□□ -1.27
CAPN3-214ENST00000565274 STK17AQ9UEE5 414 aa7.12□□□□□ -1.27
CAPN3-214ENST00000565274 TIAM1Q13009 1591 aa7.12□□□□□ -1.27
CAPN3-214ENST00000565274 WIPF1O43516 503 aa7.11□□□□□ -1.27
CAPN3-214ENST00000565274 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms