RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 FKBPLQ9UIM3 349 aa4.54□□□□□ -1.68
CHD9-209ENST00000564255 ZBBXA8MT70 800 aa4.53□□□□□ -1.68
CHD9-209ENST00000564255 FMNL1O95466 1100 aaPredicted RBP4.53□□□□□ -1.68
CHD9-209ENST00000564255 PTPRNQ16849 979 aa4.53□□□□□ -1.68
CHD9-209ENST00000564255 KANK4Q5T7N3 995 aaPredicted RBP4.53□□□□□ -1.68
CHD9-209ENST00000564255 TMCO4Q5TGY1 634 aa4.53□□□□□ -1.68
CHD9-209ENST00000564255 SOWAHBA6NEL2 793 aa4.53□□□□□ -1.68
CHD9-209ENST00000564255 FBXO45P0C2W1 286 aa4.53□□□□□ -1.68
CHD9-209ENST00000564255 PLEKHM2Q8IWE5 1019 aa4.53□□□□□ -1.68
CHD9-209ENST00000564255 APLP1P51693 650 aa4.52□□□□□ -1.69
CHD9-209ENST00000564255 LSM11P83369 360 aaKnown RBP eCLIP4.52□□□□□ -1.69
CHD9-209ENST00000564255 MSS51Q4VC12 460 aa4.52□□□□□ -1.69
CHD9-209ENST00000564255 HS3ST6Q96QI5 342 aa4.52□□□□□ -1.69
CHD9-209ENST00000564255 NR1I2O75469 434 aa4.52□□□□□ -1.69
CHD9-209ENST00000564255 VRTNQ9H8Y1 702 aa4.52□□□□□ -1.69
CHD9-209ENST00000564255 TSR3Q9UJK0 312 aaKnown RBP4.52□□□□□ -1.69
CHD9-209ENST00000564255 MFAP1P55081 439 aaKnown RBP4.51□□□□□ -1.69
CHD9-209ENST00000564255 MCCD1P59942 119 aaPredicted RBP4.51□□□□□ -1.69
CHD9-209ENST00000564255 PPP4CP60510 307 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 SCUBE3Q8IX30 993 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 ANKK1Q8NFD2 765 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 GPSM3Q9Y4H4 160 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 CARNS1A5YM72 827 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 GPKOWQ92917 476 aaPredicted RBP eCLIP4.51□□□□□ -1.691e-8■■■■■ 30.1
CHD9-209ENST00000564255 HPS5Q9UPZ3 1129 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 PIK3CDO00329 1044 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 CDCA8Q53HL2 280 aa4.51□□□□□ -1.69
CHD9-209ENST00000564255 DXOO77932 396 aaKnown RBP4.5□□□□□ -1.69
CHD9-209ENST00000564255 MMP16P51512 607 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
CHD9-209ENST00000564255 PHTF2Q8N3S3 785 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 OCSTAMPQ9BR26 566 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 MAP10Q9P2G4 905 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 PCDHB3Q9Y5E6 796 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 PDXDC2PQ6P474 469 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 ARMC2Q8NEN0 867 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 ZMIZ1Q9ULJ6 1067 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 MTMR7Q9Y216 660 aa4.5□□□□□ -1.69
CHD9-209ENST00000564255 BCAMP50895 628 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 KCNH2Q12809 1159 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 FAM160A2Q8N612 972 aaPredicted RBP4.49□□□□□ -1.69
CHD9-209ENST00000564255 FAM174AQ8TBP5 190 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 EVA1BQ9NVM1 165 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 CHIC2Q9UKJ5 165 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 GNEQ9Y223 722 aaKnown RBP4.49□□□□□ -1.69
CHD9-209ENST00000564255 USP17L3A6NCW0 530 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 USP17L4A6NCW7 530 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 LZTS3O60299 673 aaPredicted RBP4.49□□□□□ -1.69
CHD9-209ENST00000564255 PTK2Q05397 1052 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 USP17L2Q6R6M4 530 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 USP17L1Q7RTZ2 530 aa4.49□□□□□ -1.69
CHD9-209ENST00000564255 CCNYL3P0C7X3 344 aa4.48□□□□□ -1.69
CHD9-209ENST00000564255 ZNF592Q92610 1267 aa4.48□□□□□ -1.69
CHD9-209ENST00000564255 IVNS1ABPQ9Y6Y0 642 aa4.48□□□□□ -1.69
CHD9-209ENST00000564255 SKIP12755 728 aa4.48□□□□□ -1.69
CHD9-209ENST00000564255 CEP126Q9P2H0 1117 aa4.48□□□□□ -1.69
CHD9-209ENST00000564255 FAM196BA6NMK8 535 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 GOLGA8CPA6NN73 597 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L5A8MUK1 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 TMEM164Q5U3C3 297 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 CDAN1Q8IWY9 1227 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 NOVA2Q9UNW9 492 aaKnown RBP4.47□□□□□ -1.69
CHD9-209ENST00000564255 B4GALNT3Q6L9W6 998 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 WNT2BQ93097 391 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L15C9J2P7 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L10C9JJH3 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L13C9JLJ4 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L12C9JPN9 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L11C9JVI0 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L21D6R901 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L18D6R9N7 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L22D6RA61 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L17D6RBQ6 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L19D6RCP7 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L20D6RJB6 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 CTHP32929 405 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 USP17L24Q0WX57 530 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 SND1Q7KZF4 910 aaKnown RBP eCLIP4.47□□□□□ -1.69
CHD9-209ENST00000564255 TXNDC2Q86VQ3 553 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 STK32AQ8WU08 396 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 NUDT12Q9BQG2 462 aa4.47□□□□□ -1.69
CHD9-209ENST00000564255 TRAF7Q6Q0C0 670 aa4.46□□□□□ -1.7
CHD9-209ENST00000564255 SH3BP5LQ7L8J4 393 aa4.46□□□□□ -1.7
CHD9-209ENST00000564255 STAC3Q96MF2 364 aa4.46□□□□□ -1.7
CHD9-209ENST00000564255 SPSB2Q99619 263 aa4.46□□□□□ -1.7
CHD9-209ENST00000564255 PTK7Q13308 1070 aa4.46□□□□□ -1.7
CHD9-209ENST00000564255 NBPF14Q5TI25 921 aa4.46□□□□□ -1.7
CHD9-209ENST00000564255 SLAIN2Q9P270 581 aa4.46□□□□□ -1.7
CHD9-209ENST00000564255 FAM69CQ0P6D2 419 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 MAP7D1Q3KQU3 841 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 PHLDB3Q6NSJ2 640 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 PLPP7Q8NBV4 271 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 PRDM9Q9NQV7 894 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 MKRN1Q9UHC7 482 aaKnown RBP4.45□□□□□ -1.7
CHD9-209ENST00000564255 ATP5J2-PTCD1G3V325 749 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 SLFNL1Q499Z3 407 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 CRTC2Q53ET0 693 aaPredicted RBP4.45□□□□□ -1.7
CHD9-209ENST00000564255 CDCA7Q9BWT1 371 aaPredicted RBP4.45□□□□□ -1.7
CHD9-209ENST00000564255 WBP1LQ9NX94 342 aa4.45□□□□□ -1.7
CHD9-209ENST00000564255 DKK1O94907 266 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms