RNA–Protein interactions for RNA: ENST00000563875.1

SNUPN-203, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-203ENST00000563875 SLIT2O94813 1529 aa16.09■□□□□ 0.17
SNUPN-203ENST00000563875 ATRNO75882 1429 aa16.08■□□□□ 0.16
SNUPN-203ENST00000563875 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.16
SNUPN-203ENST00000563875 AKAP12Q02952 1782 aa16.08■□□□□ 0.16
SNUPN-203ENST00000563875 LMOD2Q6P5Q4 547 aa16.07■□□□□ 0.16
SNUPN-203ENST00000563875 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
SNUPN-203ENST00000563875 USP21Q9UK80 565 aa16.06■□□□□ 0.16
SNUPN-203ENST00000563875 EP400Q96L91 3159 aa16.05■□□□□ 0.16
SNUPN-203ENST00000563875 RXRBP28702 533 aa16.05■□□□□ 0.16
SNUPN-203ENST00000563875 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
SNUPN-203ENST00000563875 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
SNUPN-203ENST00000563875 RGS12O14924 1447 aa16.04■□□□□ 0.16
SNUPN-203ENST00000563875 USP6P35125 1406 aa16.04■□□□□ 0.16
SNUPN-203ENST00000563875 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
SNUPN-203ENST00000563875 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
SNUPN-203ENST00000563875 TIMELESSQ9UNS1 1208 aa16.04■□□□□ 0.16
SNUPN-203ENST00000563875 SSH2Q76I76 1423 aa16.03■□□□□ 0.16
SNUPN-203ENST00000563875 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
SNUPN-203ENST00000563875 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
SNUPN-203ENST00000563875 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
SNUPN-203ENST00000563875 RBM6P78332 1123 aaKnown RBP16.03■□□□□ 0.16
SNUPN-203ENST00000563875 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.16
SNUPN-203ENST00000563875 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
SNUPN-203ENST00000563875 PIK3C2AO00443 1686 aa16.02■□□□□ 0.16
SNUPN-203ENST00000563875 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.16
SNUPN-203ENST00000563875 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
SNUPN-203ENST00000563875 GLI3P10071 1580 aa16.01■□□□□ 0.15
SNUPN-203ENST00000563875 TESK2Q96S53 571 aa16.01■□□□□ 0.15
SNUPN-203ENST00000563875 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
SNUPN-203ENST00000563875 USP19O94966 1318 aa16■□□□□ 0.15
SNUPN-203ENST00000563875 CD163L1Q9NR16 1453 aa16■□□□□ 0.15
SNUPN-203ENST00000563875 UNC5CLQ8IV45 518 aa16■□□□□ 0.15
SNUPN-203ENST00000563875 USP47Q96K76 1375 aa16■□□□□ 0.15
SNUPN-203ENST00000563875 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
SNUPN-203ENST00000563875 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
SNUPN-203ENST00000563875 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
SNUPN-203ENST00000563875 CCER1Q8TC90 406 aaPredicted RBP15.98■□□□□ 0.15
SNUPN-203ENST00000563875 SLIT3O75094 1523 aa15.98■□□□□ 0.15
SNUPN-203ENST00000563875 ABTB2Q8N961 1025 aa15.97■□□□□ 0.15
SNUPN-203ENST00000563875 LMO7Q8WWI1 1683 aa15.96■□□□□ 0.15
SNUPN-203ENST00000563875 GJD4Q96KN9 370 aaPredicted RBP15.96■□□□□ 0.15
SNUPN-203ENST00000563875 KIAA0232Q92628 1395 aa15.96■□□□□ 0.15
SNUPN-203ENST00000563875 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
SNUPN-203ENST00000563875 PUS7Q96PZ0 661 aaKnown RBP15.95■□□□□ 0.14
SNUPN-203ENST00000563875 VPS72Q15906 364 aa15.94■□□□□ 0.14
SNUPN-203ENST00000563875 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
SNUPN-203ENST00000563875 CPDO75976 1380 aa15.94■□□□□ 0.14
SNUPN-203ENST00000563875 TTC21BQ7Z4L5 1316 aa15.94■□□□□ 0.14
SNUPN-203ENST00000563875 KTN1Q86UP2 1357 aaKnown RBP15.93■□□□□ 0.14
SNUPN-203ENST00000563875 NLRP13Q86W25 1043 aa15.93■□□□□ 0.14
SNUPN-203ENST00000563875 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
SNUPN-203ENST00000563875 BTG4Q9NY30 223 aa15.93■□□□□ 0.14
SNUPN-203ENST00000563875 BRWD3Q6RI45 1802 aa15.93■□□□□ 0.14
SNUPN-203ENST00000563875 TTC21AQ8NDW8 1320 aa15.92■□□□□ 0.14
SNUPN-203ENST00000563875 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
SNUPN-203ENST00000563875 GCP02774 474 aa15.91■□□□□ 0.14
SNUPN-203ENST00000563875 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
SNUPN-203ENST00000563875 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
SNUPN-203ENST00000563875 CAMTA1Q9Y6Y1 1673 aa15.91■□□□□ 0.14
SNUPN-203ENST00000563875 COL18A1P39060 1754 aa15.9■□□□□ 0.14
SNUPN-203ENST00000563875 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
SNUPN-203ENST00000563875 NFAT5O94916 1531 aa15.9■□□□□ 0.14
SNUPN-203ENST00000563875 SLC24A1O60721 1099 aa15.9■□□□□ 0.14
SNUPN-203ENST00000563875 NLRP6P59044 892 aa15.9■□□□□ 0.14
SNUPN-203ENST00000563875 CHRNA2Q15822 529 aa15.9■□□□□ 0.14
SNUPN-203ENST00000563875 EDC4Q6P2E9 1401 aaKnown RBP15.9■□□□□ 0.14
SNUPN-203ENST00000563875 MYOM1P52179 1685 aa15.89■□□□□ 0.13
SNUPN-203ENST00000563875 TMC1Q8TDI8 760 aa15.89■□□□□ 0.13
SNUPN-203ENST00000563875 UPF1Q92900 1129 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNUPN-203ENST00000563875 THSD7AQ9UPZ6 1657 aa15.89■□□□□ 0.13
SNUPN-203ENST00000563875 USP31Q70CQ4 1352 aa15.87■□□□□ 0.13
SNUPN-203ENST00000563875 ONECUT3O60422 494 aaPredicted RBP15.87■□□□□ 0.13
SNUPN-203ENST00000563875 TMF1P82094 1093 aa15.87■□□□□ 0.13
SNUPN-203ENST00000563875 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
SNUPN-203ENST00000563875 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
SNUPN-203ENST00000563875 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
SNUPN-203ENST00000563875 HDGFL2Q7Z4V5 671 aaPredicted RBP15.86■□□□□ 0.13
SNUPN-203ENST00000563875 TERF2IPQ9NYB0 399 aa15.86■□□□□ 0.13
SNUPN-203ENST00000563875 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
SNUPN-203ENST00000563875 CCDC9Q9Y3X0 531 aaKnown RBP15.85■□□□□ 0.13
SNUPN-203ENST00000563875 AATKQ6ZMQ8 1374 aa15.85■□□□□ 0.13
SNUPN-203ENST00000563875 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
SNUPN-203ENST00000563875 RGPD5Q99666 1765 aa15.85■□□□□ 0.13
SNUPN-203ENST00000563875 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
SNUPN-203ENST00000563875 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
SNUPN-203ENST00000563875 NME9Q86XW9 330 aa15.84■□□□□ 0.13
SNUPN-203ENST00000563875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.84■□□□□ 0.13
SNUPN-203ENST00000563875 ABCC6O95255 1503 aa15.84■□□□□ 0.13
SNUPN-203ENST00000563875 LTN1O94822 1766 aa15.83■□□□□ 0.12
SNUPN-203ENST00000563875 SEPT12Q8IYM1 358 aa15.83■□□□□ 0.12
SNUPN-203ENST00000563875 SPATA31A1Q5TZJ5 1347 aa15.83■□□□□ 0.12
SNUPN-203ENST00000563875 FAM98CQ17RN3 349 aaKnown RBP15.82■□□□□ 0.12
SNUPN-203ENST00000563875 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
SNUPN-203ENST00000563875 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
SNUPN-203ENST00000563875 STRN4Q9NRL3 753 aa15.82■□□□□ 0.12
SNUPN-203ENST00000563875 CDCA8Q53HL2 280 aa15.8■□□□□ 0.12
SNUPN-203ENST00000563875 LARP1Q6PKG0 1096 aaKnown RBP15.8■□□□□ 0.12
SNUPN-203ENST00000563875 KIF20BQ96Q89 1820 aa15.8■□□□□ 0.12
SNUPN-203ENST00000563875 WNK3Q9BYP7 1800 aa15.8■□□□□ 0.12
SNUPN-203ENST00000563875 AXIN2Q9Y2T1 843 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms