RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CRYBG1Q9Y4K1 1723 aa27.41■■□□□ 1.98
NME3-204ENST00000563498 A0A0G2JS52 829 aa27.39■■□□□ 1.98
NME3-204ENST00000563498 MYT1Q01538 1121 aa27.39■■□□□ 1.98
NME3-204ENST00000563498 FAM98CQ17RN3 349 aaKnown RBP27.39■■□□□ 1.98
NME3-204ENST00000563498 NGDNQ8NEJ9 315 aaKnown RBP27.39■■□□□ 1.98
NME3-204ENST00000563498 HRCP23327 699 aa27.37■■□□□ 1.97
NME3-204ENST00000563498 ITSN1Q15811 1721 aa27.37■■□□□ 1.97
NME3-204ENST00000563498 ARHGEF28Q8N1W1 1705 aaKnown RBP27.37■■□□□ 1.97
NME3-204ENST00000563498 ATP7BP35670 1465 aa27.36■■□□□ 1.97
NME3-204ENST00000563498 SPATA31A5Q5VU36 1347 aa27.36■■□□□ 1.97
NME3-204ENST00000563498 SPATA31A7Q8IWB4 1347 aa27.36■■□□□ 1.97
NME3-204ENST00000563498 BAG6P46379 1132 aa27.35■■□□□ 1.97
NME3-204ENST00000563498 PAK3O75914 559 aaPredicted RBP27.34■■□□□ 1.97
NME3-204ENST00000563498 LRP5O75197 1615 aa27.33■■□□□ 1.97
NME3-204ENST00000563498 NUDT16Q96DE0 195 aaKnown RBP27.32■■□□□ 1.96
NME3-204ENST00000563498 PRDM11Q9NQV5 511 aa27.32■■□□□ 1.96
NME3-204ENST00000563498 THSD7AQ9UPZ6 1657 aa27.32■■□□□ 1.96
NME3-204ENST00000563498 RGPD1P0DJD0 1748 aa27.3■■□□□ 1.96
NME3-204ENST00000563498 KIAA0232Q92628 1395 aa27.27■■□□□ 1.96
NME3-204ENST00000563498 PHRF1Q9P1Y6 1649 aaKnown RBP27.27■■□□□ 1.96
NME3-204ENST00000563498 DISP2A7MBM2 1401 aa27.26■■□□□ 1.95
NME3-204ENST00000563498 POLR3AO14802 1390 aaPredicted RBP27.26■■□□□ 1.95
NME3-204ENST00000563498 SPATA31A1Q5TZJ5 1347 aa27.25■■□□□ 1.95
NME3-204ENST00000563498 TOPAZ1Q8N9V7 1692 aa27.25■■□□□ 1.95
NME3-204ENST00000563498 CDK19Q9BWU1 502 aa27.25■■□□□ 1.95
NME3-204ENST00000563498 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
NME3-204ENST00000563498 CCDC61Q9Y6R9 512 aa27.23■■□□□ 1.95
NME3-204ENST00000563498 EN1Q05925 392 aaPredicted RBP27.22■■□□□ 1.95
NME3-204ENST00000563498 FAM182BQ5T319 152 aa27.22■■□□□ 1.95
NME3-204ENST00000563498 ACEP12821 1306 aa27.21■■□□□ 1.95
NME3-204ENST00000563498 PSDA5PKW4 1024 aaPredicted RBP27.21■■□□□ 1.95
NME3-204ENST00000563498 TNS1Q9HBL0 1735 aaKnown RBP27.21■■□□□ 1.95
NME3-204ENST00000563498 PLEKHG3A1L390 1219 aa27.2■■□□□ 1.94
NME3-204ENST00000563498 CHRNA2Q15822 529 aa27.2■■□□□ 1.94
NME3-204ENST00000563498 NBPF8Q3BBV2 869 aa27.2■■□□□ 1.94
NME3-204ENST00000563498 ZC3H6P61129 1189 aaKnown RBP27.18■■□□□ 1.94
NME3-204ENST00000563498 STRN4Q9NRL3 753 aa27.18■■□□□ 1.94
NME3-204ENST00000563498 FAM196AQ6ZSG2 479 aa27.17■■□□□ 1.94
NME3-204ENST00000563498 NUTM2GQ5VZR2 741 aa27.16■■□□□ 1.94
NME3-204ENST00000563498 NRKQ7Z2Y5 1582 aa27.16■■□□□ 1.94
NME3-204ENST00000563498 SSH2Q76I76 1423 aa27.16■■□□□ 1.94
NME3-204ENST00000563498 CPDO75976 1380 aa27.15■■□□□ 1.94
NME3-204ENST00000563498 BARGINQ6ZT62 677 aa27.15■■□□□ 1.94
NME3-204ENST00000563498 USP19O94966 1318 aa27.14■■□□□ 1.93
NME3-204ENST00000563498 ABTB2Q8N961 1025 aa27.13■■□□□ 1.93
NME3-204ENST00000563498 PARD3Q8TEW0 1356 aa27.12■■□□□ 1.93
NME3-204ENST00000563498 EVA1CP58658 441 aa27.12■■□□□ 1.93
NME3-204ENST00000563498 LMO7Q8WWI1 1683 aa27.11■■□□□ 1.93
NME3-204ENST00000563498 CAMTA1Q9Y6Y1 1673 aa27.11■■□□□ 1.93
NME3-204ENST00000563498 EZH2Q15910 746 aaKnown RBP27.11■■□□□ 1.93
NME3-204ENST00000563498 CAMKK2Q96RR4 588 aa27.11■■□□□ 1.93
NME3-204ENST00000563498 TRIM37O94972 964 aa27.1■■□□□ 1.93
NME3-204ENST00000563498 R3HDM1Q15032 1099 aaKnown RBP27.1■■□□□ 1.93
NME3-204ENST00000563498 NBPF1Q3BBV0 1214 aa27.1■■□□□ 1.93
NME3-204ENST00000563498 USP35Q9P2H5 1018 aa27.1■■□□□ 1.93
NME3-204ENST00000563498 BRD4O60885 1362 aaPredicted RBP27.09■■□□□ 1.93
NME3-204ENST00000563498 PPIP5K1Q6PFW1 1433 aa27.08■■□□□ 1.93
NME3-204ENST00000563498 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
NME3-204ENST00000563498 LARP1Q6PKG0 1096 aaKnown RBP27.07■■□□□ 1.92
NME3-204ENST00000563498 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
NME3-204ENST00000563498 TCP11L2Q8N4U5 519 aa27.07■■□□□ 1.92
NME3-204ENST00000563498 CENPJQ9HC77 1338 aaPredicted RBP27.07■■□□□ 1.92
NME3-204ENST00000563498 SRPK2P78362 688 aaKnown RBP27.06■■□□□ 1.92
NME3-204ENST00000563498 THRAP3Q9Y2W1 955 aaKnown RBP27.06■■□□□ 1.92
NME3-204ENST00000563498 APBA3O96018 575 aa27.05■■□□□ 1.92
NME3-204ENST00000563498 GCP02774 474 aa27.05■■□□□ 1.92
NME3-204ENST00000563498 COL5A2P05997 1499 aaPredicted RBP27.02■■□□□ 1.92
NME3-204ENST00000563498 RREB1Q92766 1687 aa27.01■■□□□ 1.92
NME3-204ENST00000563498 CABP2Q9NPB3 220 aa27.01■■□□□ 1.91
NME3-204ENST00000563498 PARP4Q9UKK3 1724 aaKnown RBP27■■□□□ 1.91
NME3-204ENST00000563498 QRICH2Q9H0J4 1663 aa27■■□□□ 1.91
NME3-204ENST00000563498 C11orf95C9JLR9 678 aaPredicted RBP26.99■■□□□ 1.91
NME3-204ENST00000563498 USP6P35125 1406 aa26.99■■□□□ 1.91
NME3-204ENST00000563498 CRB1P82279 1406 aa26.98■■□□□ 1.91
NME3-204ENST00000563498 NUP188Q5SRE5 1749 aa26.96■■□□□ 1.91
NME3-204ENST00000563498 SLIT3O75094 1523 aa26.96■■□□□ 1.91
NME3-204ENST00000563498 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
NME3-204ENST00000563498 AATKQ6ZMQ8 1374 aa26.96■■□□□ 1.91
NME3-204ENST00000563498 NLRP6P59044 892 aa26.94■■□□□ 1.9
NME3-204ENST00000563498 NBPF14Q5TI25 921 aa26.94■■□□□ 1.9
NME3-204ENST00000563498 OVOS2A0A0G2JMS6 1433 aa26.9■■□□□ 1.9
NME3-204ENST00000563498 OVOS2A0A0J9YW53 1432 aa26.9■■□□□ 1.9
NME3-204ENST00000563498 OVOS2Q6IE36 1432 aa26.9■■□□□ 1.9
NME3-204ENST00000563498 PEAK1Q9H792 1746 aa26.9■■□□□ 1.9
NME3-204ENST00000563498 EVC2Q86UK5 1308 aa26.9■■□□□ 1.9
NME3-204ENST00000563498 PIK3C2AO00443 1686 aa26.89■■□□□ 1.9
NME3-204ENST00000563498 L3MBTL2Q969R5 705 aa26.89■■□□□ 1.9
NME3-204ENST00000563498 LRRC37A3O60309 1634 aa26.88■■□□□ 1.89
NME3-204ENST00000563498 RGPD3A6NKT7 1758 aaPredicted RBP26.87■■□□□ 1.89
NME3-204ENST00000563498 COL18A1P39060 1754 aa26.87■■□□□ 1.89
NME3-204ENST00000563498 RGPD4Q7Z3J3 1758 aa26.87■■□□□ 1.89
NME3-204ENST00000563498 TRPM1Q7Z4N2 1603 aa26.87■■□□□ 1.89
NME3-204ENST00000563498 ZBTB7CA1YPR0 619 aa26.86■■□□□ 1.89
NME3-204ENST00000563498 DDB1Q16531 1140 aa26.85■■□□□ 1.89
NME3-204ENST00000563498 TOM1L2Q6ZVM7 507 aa26.85■■□□□ 1.89
NME3-204ENST00000563498 ZNF692Q9BU19 519 aaPredicted RBP26.85■■□□□ 1.89
NME3-204ENST00000563498 WDR17Q8IZU2 1322 aa26.84■■□□□ 1.89
NME3-204ENST00000563498 CPSF1Q10570 1443 aaKnown RBP26.83■■□□□ 1.89
NME3-204ENST00000563498 PLSCR1O15162 318 aa26.83■■□□□ 1.89
NME3-204ENST00000563498 SBF2Q86WG5 1849 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms