RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 USP21Q9UK80 565 aa40.1■■■■■ 4.01
NME3-203ENST00000563367 CRYBG1Q9Y4K1 1723 aa40.1■■■■■ 4.01
NME3-203ENST00000563367 HAP1P54257 671 aaPredicted RBP40.09■■■■■ 4.01
NME3-203ENST00000563367 QTRT2Q9H974 415 aaKnown RBP40.09■■■■■ 4.01
NME3-203ENST00000563367 RXRBP28702 533 aa40.06■■■■■ 4
NME3-203ENST00000563367 BCL9LQ86UU0 1499 aa40.05■■■■■ 4
NME3-203ENST00000563367 ST20-MTHFSA0A0A6YYL1 179 aa40.01■■■■■ 4
NME3-203ENST00000563367 SLIT2O94813 1529 aa40■■■■□ 3.99
NME3-203ENST00000563367 AKAP12Q02952 1782 aa39.99■■■■□ 3.99
NME3-203ENST00000563367 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.99■■■■□ 3.99
NME3-203ENST00000563367 PLCH1Q4KWH8 1693 aa39.99■■■■□ 3.99
NME3-203ENST00000563367 ATAD2Q6PL18 1390 aa39.98■■■■□ 3.99
NME3-203ENST00000563367 NUTM2GQ5VZR2 741 aa39.98■■■■□ 3.99
NME3-203ENST00000563367 TRPC5Q9UL62 973 aaPredicted RBP39.98■■■■□ 3.99
NME3-203ENST00000563367 ATRNO75882 1429 aa39.98■■■■□ 3.99
NME3-203ENST00000563367 RBM6P78332 1123 aaKnown RBP39.97■■■■□ 3.99
NME3-203ENST00000563367 TESK2Q96S53 571 aa39.97■■■■□ 3.99
NME3-203ENST00000563367 USP6P35125 1406 aa39.97■■■■□ 3.99
NME3-203ENST00000563367 PHRF1Q9P1Y6 1649 aaKnown RBP39.96■■■■□ 3.99
NME3-203ENST00000563367 FAM83GA6ND36 823 aa39.94■■■■□ 3.98
NME3-203ENST00000563367 ABTB2Q8N961 1025 aa39.94■■■■□ 3.98
NME3-203ENST00000563367 CDK12Q9NYV4 1490 aaPredicted RBP39.94■■■■□ 3.98
NME3-203ENST00000563367 NWD2Q9ULI1 1742 aa39.94■■■■□ 3.98
NME3-203ENST00000563367 USP47Q96K76 1375 aa39.93■■■■□ 3.98
NME3-203ENST00000563367 BRD4O60885 1362 aaPredicted RBP39.92■■■■□ 3.98
NME3-203ENST00000563367 UNC5CLQ8IV45 518 aa39.91■■■■□ 3.98
NME3-203ENST00000563367 SSH2Q76I76 1423 aa39.91■■■■□ 3.98
NME3-203ENST00000563367 COL14A1Q05707 1796 aaKnown RBP39.88■■■■□ 3.97
NME3-203ENST00000563367 CPSF1Q10570 1443 aaKnown RBP39.88■■■■□ 3.97
NME3-203ENST00000563367 RGS12O14924 1447 aa39.86■■■■□ 3.97
NME3-203ENST00000563367 ZNF692Q9BU19 519 aaPredicted RBP39.86■■■■□ 3.97
NME3-203ENST00000563367 MON2Q7Z3U7 1717 aa39.85■■■■□ 3.97
NME3-203ENST00000563367 PIK3C2AO00443 1686 aa39.84■■■■□ 3.97
NME3-203ENST00000563367 NRAPQ86VF7 1730 aa39.83■■■■□ 3.97
NME3-203ENST00000563367 PUS7Q96PZ0 661 aaKnown RBP39.83■■■■□ 3.97
NME3-203ENST00000563367 NRKQ7Z2Y5 1582 aa39.83■■■■□ 3.97
NME3-203ENST00000563367 USP19O94966 1318 aa39.83■■■■□ 3.97
NME3-203ENST00000563367 TMC1Q8TDI8 760 aa39.82■■■■□ 3.97
NME3-203ENST00000563367 GJD4Q96KN9 370 aaPredicted RBP39.82■■■■□ 3.97
NME3-203ENST00000563367 CD163L1Q9NR16 1453 aa39.81■■■■□ 3.96
NME3-203ENST00000563367 NLRP13Q86W25 1043 aa39.81■■■■□ 3.96
NME3-203ENST00000563367 SLC12A5Q9H2X9 1139 aa39.81■■■■□ 3.96
NME3-203ENST00000563367 KTN1Q86UP2 1357 aaKnown RBP39.8■■■■□ 3.96
NME3-203ENST00000563367 KIAA0232Q92628 1395 aa39.8■■■■□ 3.96
NME3-203ENST00000563367 GLI3P10071 1580 aa39.8■■■■□ 3.96
NME3-203ENST00000563367 PRDM11Q9NQV5 511 aa39.79■■■■□ 3.96
NME3-203ENST00000563367 TTC21BQ7Z4L5 1316 aa39.79■■■■□ 3.96
NME3-203ENST00000563367 ZC3H6P61129 1189 aaKnown RBP39.78■■■■□ 3.96
NME3-203ENST00000563367 BTG4Q9NY30 223 aa39.78■■■■□ 3.96
NME3-203ENST00000563367 SLC24A1O60721 1099 aa39.77■■■■□ 3.96
NME3-203ENST00000563367 NLRP6P59044 892 aa39.77■■■■□ 3.96
NME3-203ENST00000563367 VPS72Q15906 364 aa39.75■■■■□ 3.95
NME3-203ENST00000563367 CHRNA2Q15822 529 aa39.74■■■■□ 3.95
NME3-203ENST00000563367 GCP02774 474 aa39.72■■■■□ 3.95
NME3-203ENST00000563367 SLIT3O75094 1523 aa39.71■■■■□ 3.95
NME3-203ENST00000563367 TTC21AQ8NDW8 1320 aa39.71■■■■□ 3.95
NME3-203ENST00000563367 TMF1P82094 1093 aa39.71■■■■□ 3.95
NME3-203ENST00000563367 HDGFL2Q7Z4V5 671 aaPredicted RBP39.68■■■■□ 3.94
NME3-203ENST00000563367 CPDO75976 1380 aa39.68■■■■□ 3.94
NME3-203ENST00000563367 CCDC9Q9Y3X0 531 aaKnown RBP39.67■■■■□ 3.94
NME3-203ENST00000563367 A0A1W2PP64 1363 aa39.67■■■■□ 3.94
NME3-203ENST00000563367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.66■■■■□ 3.94
NME3-203ENST00000563367 TERF2IPQ9NYB0 399 aa39.66■■■■□ 3.94
NME3-203ENST00000563367 NINLQ9Y2I6 1382 aa39.65■■■■□ 3.94
NME3-203ENST00000563367 LMO7Q8WWI1 1683 aa39.64■■■■□ 3.94
NME3-203ENST00000563367 ZRANB1Q9UGI0 708 aa39.62■■■■□ 3.93
NME3-203ENST00000563367 CAMTA1Q9Y6Y1 1673 aa39.61■■■■□ 3.93
NME3-203ENST00000563367 BRWD3Q6RI45 1802 aa39.61■■■■□ 3.93
NME3-203ENST00000563367 EDC4Q6P2E9 1401 aaKnown RBP39.61■■■■□ 3.93
NME3-203ENST00000563367 NME9Q86XW9 330 aa39.59■■■■□ 3.93
NME3-203ENST00000563367 USP54Q70EL1 1684 aa39.59■■■■□ 3.93
NME3-203ENST00000563367 UPF1Q92900 1129 aaKnown RBP eCLIP39.57■■■■□ 3.93
NME3-203ENST00000563367 STRN4Q9NRL3 753 aa39.57■■■■□ 3.93
NME3-203ENST00000563367 SPATA31A5Q5VU36 1347 aa39.56■■■■□ 3.92
NME3-203ENST00000563367 SPATA31A7Q8IWB4 1347 aa39.56■■■■□ 3.92
NME3-203ENST00000563367 USP31Q70CQ4 1352 aa39.56■■■■□ 3.92
NME3-203ENST00000563367 COL18A1P39060 1754 aa39.56■■■■□ 3.92
NME3-203ENST00000563367 ONECUT3O60422 494 aaPredicted RBP39.55■■■■□ 3.92
NME3-203ENST00000563367 CDCA8Q53HL2 280 aa39.55■■■■□ 3.92
NME3-203ENST00000563367 ZBTB7CA1YPR0 619 aa39.54■■■■□ 3.92
NME3-203ENST00000563367 SOX12O15370 315 aa39.53■■■■□ 3.92
NME3-203ENST00000563367 SEPT12Q8IYM1 358 aa39.53■■■■□ 3.92
NME3-203ENST00000563367 MYOM1P52179 1685 aa39.52■■■■□ 3.92
NME3-203ENST00000563367 NFAT5O94916 1531 aa39.52■■■■□ 3.92
NME3-203ENST00000563367 HSPA5P11021 654 aaKnown RBP39.52■■■■□ 3.92
NME3-203ENST00000563367 EIF4G2P78344 907 aaKnown RBP eCLIP39.52■■■■□ 3.92
NME3-203ENST00000563367 KCNH5Q8NCM2 988 aa39.52■■■■□ 3.92
NME3-203ENST00000563367 ANKRD36BQ8N2N9 1353 aa39.51■■■■□ 3.92
NME3-203ENST00000563367 EVA1CP58658 441 aa39.5■■■■□ 3.91
NME3-203ENST00000563367 FAM98CQ17RN3 349 aaKnown RBP39.5■■■■□ 3.91
NME3-203ENST00000563367 RGPD5Q99666 1765 aa39.5■■■■□ 3.91
NME3-203ENST00000563367 AATKQ6ZMQ8 1374 aa39.49■■■■□ 3.91
NME3-203ENST00000563367 SPATA31A1Q5TZJ5 1347 aa39.48■■■■□ 3.91
NME3-203ENST00000563367 ARHGEF25Q86VW2 580 aa39.48■■■■□ 3.91
NME3-203ENST00000563367 COL5A2P05997 1499 aaPredicted RBP39.47■■■■□ 3.91
NME3-203ENST00000563367 LARP1Q6PKG0 1096 aaKnown RBP39.46■■■■□ 3.91
NME3-203ENST00000563367 EP400Q96L91 3159 aa39.43■■■■□ 3.9
NME3-203ENST00000563367 OVOS2A0A0J9YW53 1432 aa39.43■■■■□ 3.9
NME3-203ENST00000563367 OVOS2Q6IE36 1432 aa39.43■■■■□ 3.9
NME3-203ENST00000563367 AXIN2Q9Y2T1 843 aa39.43■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms