RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 PRR36Q9H6K5 1346 aa23.12■■□□□ 1.29
HERPUD1-205ENST00000562914 FAM98CQ17RN3 349 aaKnown RBP23.12■■□□□ 1.29
HERPUD1-205ENST00000562914 NGDNQ8NEJ9 315 aaKnown RBP23.12■■□□□ 1.29
HERPUD1-205ENST00000562914 LRP5O75197 1615 aa23.11■■□□□ 1.29
HERPUD1-205ENST00000562914 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
HERPUD1-205ENST00000562914 SPATA31A5Q5VU36 1347 aa23.09■■□□□ 1.29
HERPUD1-205ENST00000562914 SPATA31A7Q8IWB4 1347 aa23.09■■□□□ 1.29
HERPUD1-205ENST00000562914 KDM2AQ9Y2K7 1162 aa23.08■■□□□ 1.29
HERPUD1-205ENST00000562914 ITSN1Q15811 1721 aa23.08■■□□□ 1.28
HERPUD1-205ENST00000562914 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
HERPUD1-205ENST00000562914 PRDM11Q9NQV5 511 aa23.07■■□□□ 1.28
HERPUD1-205ENST00000562914 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
HERPUD1-205ENST00000562914 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
HERPUD1-205ENST00000562914 HRCP23327 699 aa23.06■■□□□ 1.28
HERPUD1-205ENST00000562914 ATP7BP35670 1465 aa23.05■■□□□ 1.28
HERPUD1-205ENST00000562914 DISP2A7MBM2 1401 aa23.05■■□□□ 1.28
HERPUD1-205ENST00000562914 THSD7AQ9UPZ6 1657 aa23.04■■□□□ 1.28
HERPUD1-205ENST00000562914 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
HERPUD1-205ENST00000562914 ARHGEF28Q8N1W1 1705 aaKnown RBP23.02■■□□□ 1.28
HERPUD1-205ENST00000562914 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
HERPUD1-205ENST00000562914 KIAA0232Q92628 1395 aa23■■□□□ 1.27
HERPUD1-205ENST00000562914 EN1Q05925 392 aaPredicted RBP22.99■■□□□ 1.27
HERPUD1-205ENST00000562914 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
HERPUD1-205ENST00000562914 FAM196AQ6ZSG2 479 aa22.98■■□□□ 1.27
HERPUD1-205ENST00000562914 PHRF1Q9P1Y6 1649 aaKnown RBP22.97■■□□□ 1.27
HERPUD1-205ENST00000562914 PSDA5PKW4 1024 aaPredicted RBP22.97■■□□□ 1.27
HERPUD1-205ENST00000562914 CCDC61Q9Y6R9 512 aa22.97■■□□□ 1.27
HERPUD1-205ENST00000562914 CDK19Q9BWU1 502 aa22.96■■□□□ 1.27
HERPUD1-205ENST00000562914 PARD3Q8TEW0 1356 aa22.96■■□□□ 1.27
HERPUD1-205ENST00000562914 TNS1Q9HBL0 1735 aaKnown RBP22.94■■□□□ 1.26
HERPUD1-205ENST00000562914 ACEP12821 1306 aa22.94■■□□□ 1.26
HERPUD1-205ENST00000562914 PLEKHG3A1L390 1219 aa22.94■■□□□ 1.26
HERPUD1-205ENST00000562914 BARGINQ6ZT62 677 aa22.94■■□□□ 1.26
HERPUD1-205ENST00000562914 KIAA1210Q9ULL0 1709 aa22.94■■□□□ 1.26
HERPUD1-205ENST00000562914 TOPAZ1Q8N9V7 1692 aa22.93■■□□□ 1.26
HERPUD1-205ENST00000562914 NBPF8Q3BBV2 869 aa22.93■■□□□ 1.26
HERPUD1-205ENST00000562914 FAM182BQ5T319 152 aa22.93■■□□□ 1.26
HERPUD1-205ENST00000562914 STRN4Q9NRL3 753 aa22.93■■□□□ 1.26
HERPUD1-205ENST00000562914 EVA1CP58658 441 aa22.92■■□□□ 1.26
HERPUD1-205ENST00000562914 CHRNA2Q15822 529 aa22.92■■□□□ 1.26
HERPUD1-205ENST00000562914 CPDO75976 1380 aa22.91■■□□□ 1.26
HERPUD1-205ENST00000562914 ZC3H6P61129 1189 aaKnown RBP22.91■■□□□ 1.26
HERPUD1-205ENST00000562914 SSH2Q76I76 1423 aa22.91■■□□□ 1.26
HERPUD1-205ENST00000562914 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
HERPUD1-205ENST00000562914 R3HDM1Q15032 1099 aaKnown RBP22.9■■□□□ 1.26
HERPUD1-205ENST00000562914 PDE3BQ13370 1112 aa22.89■■□□□ 1.25
HERPUD1-205ENST00000562914 ABTB2Q8N961 1025 aa22.89■■□□□ 1.25
HERPUD1-205ENST00000562914 CAMKK2Q96RR4 588 aa22.89■■□□□ 1.25
HERPUD1-205ENST00000562914 THRAP3Q9Y2W1 955 aaKnown RBP22.89■■□□□ 1.25
HERPUD1-205ENST00000562914 C11orf95C9JLR9 678 aaPredicted RBP22.88■■□□□ 1.25
HERPUD1-205ENST00000562914 TRIM37O94972 964 aa22.88■■□□□ 1.25
HERPUD1-205ENST00000562914 EZH2Q15910 746 aaKnown RBP22.88■■□□□ 1.25
HERPUD1-205ENST00000562914 NRKQ7Z2Y5 1582 aa22.88■■□□□ 1.25
HERPUD1-205ENST00000562914 USP19O94966 1318 aa22.87■■□□□ 1.25
HERPUD1-205ENST00000562914 NUTM2GQ5VZR2 741 aa22.87■■□□□ 1.25
HERPUD1-205ENST00000562914 NLRP13Q86W25 1043 aa22.87■■□□□ 1.25
HERPUD1-205ENST00000562914 APBA3O96018 575 aa22.86■■□□□ 1.25
HERPUD1-205ENST00000562914 TCP11L2Q8N4U5 519 aa22.86■■□□□ 1.25
HERPUD1-205ENST00000562914 USP35Q9P2H5 1018 aa22.85■■□□□ 1.25
HERPUD1-205ENST00000562914 LMO7Q8WWI1 1683 aa22.84■■□□□ 1.25
HERPUD1-205ENST00000562914 CAMTA1Q9Y6Y1 1673 aa22.84■■□□□ 1.25
HERPUD1-205ENST00000562914 GCP02774 474 aa22.82■■□□□ 1.24
HERPUD1-205ENST00000562914 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
HERPUD1-205ENST00000562914 LARP1Q6PKG0 1096 aaKnown RBP22.82■■□□□ 1.24
HERPUD1-205ENST00000562914 PPIP5K1Q6PFW1 1433 aa22.82■■□□□ 1.24
HERPUD1-205ENST00000562914 CENPJQ9HC77 1338 aaPredicted RBP22.82■■□□□ 1.24
HERPUD1-205ENST00000562914 NBPF14Q5TI25 921 aa22.81■■□□□ 1.24
HERPUD1-205ENST00000562914 RREB1Q92766 1687 aa22.8■■□□□ 1.24
HERPUD1-205ENST00000562914 COL5A2P05997 1499 aaPredicted RBP22.79■■□□□ 1.24
HERPUD1-205ENST00000562914 NBPF1Q3BBV0 1214 aa22.78■■□□□ 1.24
HERPUD1-205ENST00000562914 PARP4Q9UKK3 1724 aaKnown RBP22.77■■□□□ 1.24
HERPUD1-205ENST00000562914 CRB1P82279 1406 aa22.77■■□□□ 1.24
HERPUD1-205ENST00000562914 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
HERPUD1-205ENST00000562914 USP6P35125 1406 aa22.74■■□□□ 1.23
HERPUD1-205ENST00000562914 CABP2Q9NPB3 220 aa22.74■■□□□ 1.23
HERPUD1-205ENST00000562914 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
HERPUD1-205ENST00000562914 OVOS2A0A0G2JMS6 1433 aa22.74■■□□□ 1.23
HERPUD1-205ENST00000562914 OVOS2A0A0J9YW53 1432 aa22.74■■□□□ 1.23
HERPUD1-205ENST00000562914 OVOS2Q6IE36 1432 aa22.74■■□□□ 1.23
HERPUD1-205ENST00000562914 SLIT3O75094 1523 aa22.72■■□□□ 1.23
HERPUD1-205ENST00000562914 NLRP6P59044 892 aa22.72■■□□□ 1.23
HERPUD1-205ENST00000562914 QRICH2Q9H0J4 1663 aa22.71■■□□□ 1.23
HERPUD1-205ENST00000562914 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
HERPUD1-205ENST00000562914 RGPD3A6NKT7 1758 aaPredicted RBP22.7■■□□□ 1.22
HERPUD1-205ENST00000562914 RGPD4Q7Z3J3 1758 aa22.7■■□□□ 1.22
HERPUD1-205ENST00000562914 EVC2Q86UK5 1308 aa22.69■■□□□ 1.22
HERPUD1-205ENST00000562914 PLSCR1O15162 318 aa22.69■■□□□ 1.22
HERPUD1-205ENST00000562914 CDCA7Q9BWT1 371 aaPredicted RBP22.69■■□□□ 1.22
HERPUD1-205ENST00000562914 DDB1Q16531 1140 aa22.68■■□□□ 1.22
HERPUD1-205ENST00000562914 ZNF692Q9BU19 519 aaPredicted RBP22.68■■□□□ 1.22
HERPUD1-205ENST00000562914 SPON1Q9HCB6 807 aa22.68■■□□□ 1.22
HERPUD1-205ENST00000562914 TOM1L2Q6ZVM7 507 aa22.67■■□□□ 1.22
HERPUD1-205ENST00000562914 PEAK1Q9H792 1746 aa22.67■■□□□ 1.22
HERPUD1-205ENST00000562914 WDR17Q8IZU2 1322 aa22.66■■□□□ 1.22
HERPUD1-205ENST00000562914 KCNH5Q8NCM2 988 aa22.66■■□□□ 1.22
HERPUD1-205ENST00000562914 BCL9O00512 1426 aa22.65■■□□□ 1.22
HERPUD1-205ENST00000562914 LRRC37A3O60309 1634 aa22.64■■□□□ 1.22
HERPUD1-205ENST00000562914 ZBTB7CA1YPR0 619 aa22.64■■□□□ 1.21
HERPUD1-205ENST00000562914 KCNQ2O43526 872 aa22.64■■□□□ 1.21
HERPUD1-205ENST00000562914 BCL11BQ9C0K0 894 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms