RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 BAG6P46379 1132 aa24.22■■□□□ 1.47
CMTM3-205ENST00000562707 PRDM11Q9NQV5 511 aa24.21■■□□□ 1.47
CMTM3-205ENST00000562707 NUDT16Q96DE0 195 aaKnown RBP24.2■■□□□ 1.46
CMTM3-205ENST00000562707 SPATA31A5Q5VU36 1347 aa24.18■■□□□ 1.46
CMTM3-205ENST00000562707 SPATA31A7Q8IWB4 1347 aa24.18■■□□□ 1.46
CMTM3-205ENST00000562707 ABCA3Q99758 1704 aa24.18■■□□□ 1.46
CMTM3-205ENST00000562707 BRWD3Q6RI45 1802 aa24.17■■□□□ 1.46
CMTM3-205ENST00000562707 TRPM3Q9HCF6 1732 aaPredicted RBP24.16■■□□□ 1.46
CMTM3-205ENST00000562707 CDK19Q9BWU1 502 aa24.15■■□□□ 1.46
CMTM3-205ENST00000562707 COL14A1Q05707 1796 aaKnown RBP24.14■■□□□ 1.45
CMTM3-205ENST00000562707 ALS2Q96Q42 1657 aa24.13■■□□□ 1.45
CMTM3-205ENST00000562707 FAM182BQ5T319 152 aa24.12■■□□□ 1.45
CMTM3-205ENST00000562707 CHRNA2Q15822 529 aa24.11■■□□□ 1.45
CMTM3-205ENST00000562707 CCDC61Q9Y6R9 512 aa24.11■■□□□ 1.45
CMTM3-205ENST00000562707 KIAA0232Q92628 1395 aa24.11■■□□□ 1.45
CMTM3-205ENST00000562707 PSDA5PKW4 1024 aaPredicted RBP24.1■■□□□ 1.45
CMTM3-205ENST00000562707 ZC3H6P61129 1189 aaKnown RBP24.1■■□□□ 1.45
CMTM3-205ENST00000562707 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
CMTM3-205ENST00000562707 NBPF8Q3BBV2 869 aa24.1■■□□□ 1.45
CMTM3-205ENST00000562707 NUTM2GQ5VZR2 741 aa24.1■■□□□ 1.45
CMTM3-205ENST00000562707 STRN4Q9NRL3 753 aa24.1■■□□□ 1.45
CMTM3-205ENST00000562707 ATP7BP35670 1465 aa24.1■■□□□ 1.45
CMTM3-205ENST00000562707 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
CMTM3-205ENST00000562707 SPATA31A1Q5TZJ5 1347 aa24.1■■□□□ 1.45
CMTM3-205ENST00000562707 ACEP12821 1306 aa24.09■■□□□ 1.45
CMTM3-205ENST00000562707 EVA1CP58658 441 aa24.08■■□□□ 1.45
CMTM3-205ENST00000562707 PLEKHG3A1L390 1219 aa24.07■■□□□ 1.44
CMTM3-205ENST00000562707 POLR3AO14802 1390 aaPredicted RBP24.05■■□□□ 1.44
CMTM3-205ENST00000562707 FAM196AQ6ZSG2 479 aa24.05■■□□□ 1.44
CMTM3-205ENST00000562707 ABTB2Q8N961 1025 aa24.05■■□□□ 1.44
CMTM3-205ENST00000562707 USP35Q9P2H5 1018 aa24.03■■□□□ 1.44
CMTM3-205ENST00000562707 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.44
CMTM3-205ENST00000562707 ARHGEF28Q8N1W1 1705 aaKnown RBP24.01■■□□□ 1.43
CMTM3-205ENST00000562707 TRIM37O94972 964 aa24.01■■□□□ 1.43
CMTM3-205ENST00000562707 NBPF1Q3BBV0 1214 aa24.01■■□□□ 1.43
CMTM3-205ENST00000562707 PDE3BQ13370 1112 aa24■■□□□ 1.43
CMTM3-205ENST00000562707 R3HDM1Q15032 1099 aaKnown RBP24■■□□□ 1.43
CMTM3-205ENST00000562707 BARGINQ6ZT62 677 aa24■■□□□ 1.43
CMTM3-205ENST00000562707 NLRP13Q86W25 1043 aa24■■□□□ 1.43
CMTM3-205ENST00000562707 ITSN1Q15811 1721 aa24■■□□□ 1.43
CMTM3-205ENST00000562707 EZH2Q15910 746 aaKnown RBP23.99■■□□□ 1.43
CMTM3-205ENST00000562707 DISP2A7MBM2 1401 aa23.99■■□□□ 1.43
CMTM3-205ENST00000562707 THSD7AQ9UPZ6 1657 aa23.99■■□□□ 1.43
CMTM3-205ENST00000562707 CRYBG1Q9Y4K1 1723 aa23.98■■□□□ 1.43
CMTM3-205ENST00000562707 APBA3O96018 575 aa23.97■■□□□ 1.43
CMTM3-205ENST00000562707 CENPJQ9HC77 1338 aaPredicted RBP23.97■■□□□ 1.43
CMTM3-205ENST00000562707 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
CMTM3-205ENST00000562707 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
CMTM3-205ENST00000562707 TCP11L2Q8N4U5 519 aa23.96■■□□□ 1.43
CMTM3-205ENST00000562707 CAMKK2Q96RR4 588 aa23.96■■□□□ 1.43
CMTM3-205ENST00000562707 CPDO75976 1380 aa23.95■■□□□ 1.42
CMTM3-205ENST00000562707 USP19O94966 1318 aa23.95■■□□□ 1.42
CMTM3-205ENST00000562707 GCP02774 474 aa23.95■■□□□ 1.42
CMTM3-205ENST00000562707 CABP2Q9NPB3 220 aa23.95■■□□□ 1.42
CMTM3-205ENST00000562707 RGPD1P0DJD0 1748 aa23.95■■□□□ 1.42
CMTM3-205ENST00000562707 LRP5O75197 1615 aa23.95■■□□□ 1.42
CMTM3-205ENST00000562707 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
CMTM3-205ENST00000562707 PHRF1Q9P1Y6 1649 aaKnown RBP23.93■■□□□ 1.42
CMTM3-205ENST00000562707 THRAP3Q9Y2W1 955 aaKnown RBP23.93■■□□□ 1.42
CMTM3-205ENST00000562707 BRD4O60885 1362 aaPredicted RBP23.91■■□□□ 1.42
CMTM3-205ENST00000562707 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
CMTM3-205ENST00000562707 KIAA1210Q9ULL0 1709 aa23.9■■□□□ 1.42
CMTM3-205ENST00000562707 CAMTA1Q9Y6Y1 1673 aa23.9■■□□□ 1.42
CMTM3-205ENST00000562707 CABP1Q9NZU7 370 aa23.9■■□□□ 1.42
CMTM3-205ENST00000562707 TOPAZ1Q8N9V7 1692 aa23.89■■□□□ 1.42
CMTM3-205ENST00000562707 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.41
CMTM3-205ENST00000562707 NLRP6P59044 892 aa23.89■■□□□ 1.41
CMTM3-205ENST00000562707 NRKQ7Z2Y5 1582 aa23.87■■□□□ 1.41
CMTM3-205ENST00000562707 C11orf95C9JLR9 678 aaPredicted RBP23.87■■□□□ 1.41
CMTM3-205ENST00000562707 NBPF14Q5TI25 921 aa23.87■■□□□ 1.41
CMTM3-205ENST00000562707 TNS1Q9HBL0 1735 aaKnown RBP23.84■■□□□ 1.41
CMTM3-205ENST00000562707 EVC2Q86UK5 1308 aa23.84■■□□□ 1.41
CMTM3-205ENST00000562707 L3MBTL2Q969R5 705 aa23.83■■□□□ 1.41
CMTM3-205ENST00000562707 USP6P35125 1406 aa23.83■■□□□ 1.4
CMTM3-205ENST00000562707 AATKQ6ZMQ8 1374 aa23.82■■□□□ 1.4
CMTM3-205ENST00000562707 CRB1P82279 1406 aa23.82■■□□□ 1.4
CMTM3-205ENST00000562707 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
CMTM3-205ENST00000562707 LMO7Q8WWI1 1683 aa23.81■■□□□ 1.4
CMTM3-205ENST00000562707 TOM1L2Q6ZVM7 507 aa23.8■■□□□ 1.4
CMTM3-205ENST00000562707 ZNF692Q9BU19 519 aaPredicted RBP23.79■■□□□ 1.4
CMTM3-205ENST00000562707 DDB1Q16531 1140 aa23.78■■□□□ 1.4
CMTM3-205ENST00000562707 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
CMTM3-205ENST00000562707 OVOS2A0A0G2JMS6 1433 aa23.75■■□□□ 1.39
CMTM3-205ENST00000562707 OVOS2A0A0J9YW53 1432 aa23.75■■□□□ 1.39
CMTM3-205ENST00000562707 OVOS2Q6IE36 1432 aa23.75■■□□□ 1.39
CMTM3-205ENST00000562707 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
CMTM3-205ENST00000562707 CDCA7Q9BWT1 371 aaPredicted RBP23.74■■□□□ 1.39
CMTM3-205ENST00000562707 TTC21BQ7Z4L5 1316 aa23.74■■□□□ 1.39
CMTM3-205ENST00000562707 SLIT3O75094 1523 aa23.74■■□□□ 1.39
CMTM3-205ENST00000562707 NEUROD1Q13562 356 aa23.73■■□□□ 1.39
CMTM3-205ENST00000562707 AXIN2Q9Y2T1 843 aa23.73■■□□□ 1.39
CMTM3-205ENST00000562707 WDR17Q8IZU2 1322 aa23.73■■□□□ 1.39
CMTM3-205ENST00000562707 ROCK2O75116 1388 aaKnown RBP23.73■■□□□ 1.39
CMTM3-205ENST00000562707 QRICH2Q9H0J4 1663 aa23.73■■□□□ 1.39
CMTM3-205ENST00000562707 PLSCR1O15162 318 aa23.72■■□□□ 1.39
CMTM3-205ENST00000562707 CSB-PGBD3P0DP91 1061 aa23.72■■□□□ 1.39
CMTM3-205ENST00000562707 ARHGEF25Q86VW2 580 aa23.72■■□□□ 1.39
CMTM3-205ENST00000562707 SPON1Q9HCB6 807 aa23.72■■□□□ 1.39
CMTM3-205ENST00000562707 TTC21AQ8NDW8 1320 aa23.71■■□□□ 1.39
CMTM3-205ENST00000562707 SOX12O15370 315 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms