RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 PLEKHG3A1L390 1219 aa15.89■□□□□ 0.13
LPCAT4-202ENST00000562404 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
LPCAT4-202ENST00000562404 PHRF1Q9P1Y6 1649 aaKnown RBP15.89■□□□□ 0.13
LPCAT4-202ENST00000562404 NWD2Q9ULI1 1742 aa15.88■□□□□ 0.13
LPCAT4-202ENST00000562404 GLI3P10071 1580 aa15.88■□□□□ 0.13
LPCAT4-202ENST00000562404 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
LPCAT4-202ENST00000562404 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
LPCAT4-202ENST00000562404 TRPC5Q9UL62 973 aaPredicted RBP15.88■□□□□ 0.13
LPCAT4-202ENST00000562404 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
LPCAT4-202ENST00000562404 FAM83GA6ND36 823 aa15.86■□□□□ 0.13
LPCAT4-202ENST00000562404 HAP1P54257 671 aaPredicted RBP15.86■□□□□ 0.13
LPCAT4-202ENST00000562404 NUTM2GQ5VZR2 741 aa15.85■□□□□ 0.13
LPCAT4-202ENST00000562404 UNC5CLQ8IV45 518 aa15.85■□□□□ 0.13
LPCAT4-202ENST00000562404 AKAP12Q02952 1782 aa15.85■□□□□ 0.13
LPCAT4-202ENST00000562404 COL14A1Q05707 1796 aaKnown RBP15.85■□□□□ 0.13
LPCAT4-202ENST00000562404 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
LPCAT4-202ENST00000562404 CARD11Q9BXL7 1154 aa15.84■□□□□ 0.13
LPCAT4-202ENST00000562404 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
LPCAT4-202ENST00000562404 CABP1Q9NZU7 370 aa15.84■□□□□ 0.13
LPCAT4-202ENST00000562404 UPF1Q92900 1129 aaKnown RBP eCLIP15.83■□□□□ 0.12
LPCAT4-202ENST00000562404 GJD4Q96KN9 370 aaPredicted RBP15.83■□□□□ 0.12
LPCAT4-202ENST00000562404 EVC2Q86UK5 1308 aa15.83■□□□□ 0.12
LPCAT4-202ENST00000562404 NRKQ7Z2Y5 1582 aa15.82■□□□□ 0.12
LPCAT4-202ENST00000562404 PIK3C2AO00443 1686 aa15.81■□□□□ 0.12
LPCAT4-202ENST00000562404 USP6P35125 1406 aa15.81■□□□□ 0.12
LPCAT4-202ENST00000562404 SSH2Q76I76 1423 aa15.8■□□□□ 0.12
LPCAT4-202ENST00000562404 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
LPCAT4-202ENST00000562404 EP400Q96L91 3159 aa15.79■□□□□ 0.12
LPCAT4-202ENST00000562404 KIAA0232Q92628 1395 aa15.79■□□□□ 0.12
LPCAT4-202ENST00000562404 VPS72Q15906 364 aa15.79■□□□□ 0.12
LPCAT4-202ENST00000562404 BTG4Q9NY30 223 aa15.79■□□□□ 0.12
LPCAT4-202ENST00000562404 MON2Q7Z3U7 1717 aa15.78■□□□□ 0.12
LPCAT4-202ENST00000562404 ABTB2Q8N961 1025 aa15.78■□□□□ 0.12
LPCAT4-202ENST00000562404 USP19O94966 1318 aa15.77■□□□□ 0.12
LPCAT4-202ENST00000562404 ZC3H6P61129 1189 aaKnown RBP15.77■□□□□ 0.12
LPCAT4-202ENST00000562404 CHRNA2Q15822 529 aa15.77■□□□□ 0.12
LPCAT4-202ENST00000562404 LMO7Q8WWI1 1683 aa15.76■□□□□ 0.11
LPCAT4-202ENST00000562404 PRDM11Q9NQV5 511 aa15.76■□□□□ 0.11
LPCAT4-202ENST00000562404 CD163L1Q9NR16 1453 aa15.76■□□□□ 0.11
LPCAT4-202ENST00000562404 CPSF1Q10570 1443 aaKnown RBP15.76■□□□□ 0.11
LPCAT4-202ENST00000562404 TESK2Q96S53 571 aa15.75■□□□□ 0.11
LPCAT4-202ENST00000562404 ATAD2Q6PL18 1390 aa15.75■□□□□ 0.11
LPCAT4-202ENST00000562404 SLIT3O75094 1523 aa15.74■□□□□ 0.11
LPCAT4-202ENST00000562404 CAMTA1Q9Y6Y1 1673 aa15.74■□□□□ 0.11
LPCAT4-202ENST00000562404 ST20-MTHFSA0A0A6YYL1 179 aa15.74■□□□□ 0.11
LPCAT4-202ENST00000562404 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
LPCAT4-202ENST00000562404 BRD4O60885 1362 aaPredicted RBP15.74■□□□□ 0.11
LPCAT4-202ENST00000562404 COL18A1P39060 1754 aa15.72■□□□□ 0.11
LPCAT4-202ENST00000562404 RGPD5Q99666 1765 aa15.72■□□□□ 0.11
LPCAT4-202ENST00000562404 TTC21BQ7Z4L5 1316 aa15.72■□□□□ 0.11
LPCAT4-202ENST00000562404 ONECUT3O60422 494 aaPredicted RBP15.72■□□□□ 0.11
LPCAT4-202ENST00000562404 GCP02774 474 aa15.72■□□□□ 0.11
LPCAT4-202ENST00000562404 NLRP13Q86W25 1043 aa15.72■□□□□ 0.11
LPCAT4-202ENST00000562404 SEPT12Q8IYM1 358 aa15.72■□□□□ 0.11
LPCAT4-202ENST00000562404 NLRP6P59044 892 aa15.71■□□□□ 0.11
LPCAT4-202ENST00000562404 SLC12A5Q9H2X9 1139 aa15.71■□□□□ 0.11
LPCAT4-202ENST00000562404 CPDO75976 1380 aa15.71■□□□□ 0.11
LPCAT4-202ENST00000562404 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 THSD7AQ9UPZ6 1657 aa15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 FAM98CQ17RN3 349 aaKnown RBP15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 ZNF692Q9BU19 519 aaPredicted RBP15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 KTN1Q86UP2 1357 aaKnown RBP15.7■□□□□ 0.1
LPCAT4-202ENST00000562404 STRN4Q9NRL3 753 aa15.69■□□□□ 0.1
LPCAT4-202ENST00000562404 USP47Q96K76 1375 aa15.69■□□□□ 0.1
LPCAT4-202ENST00000562404 USP54Q70EL1 1684 aa15.68■□□□□ 0.1
LPCAT4-202ENST00000562404 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
LPCAT4-202ENST00000562404 NFAT5O94916 1531 aa15.67■□□□□ 0.1
LPCAT4-202ENST00000562404 SPATA31A1Q5TZJ5 1347 aa15.67■□□□□ 0.1
LPCAT4-202ENST00000562404 COL5A2P05997 1499 aaPredicted RBP15.66■□□□□ 0.1
LPCAT4-202ENST00000562404 A0A1W2PP64 1363 aa15.66■□□□□ 0.1
LPCAT4-202ENST00000562404 LARP1Q6PKG0 1096 aaKnown RBP15.66■□□□□ 0.1
LPCAT4-202ENST00000562404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.66■□□□□ 0.1
LPCAT4-202ENST00000562404 TTC21AQ8NDW8 1320 aa15.66■□□□□ 0.1
LPCAT4-202ENST00000562404 ZBTB7CA1YPR0 619 aa15.65■□□□□ 0.1
LPCAT4-202ENST00000562404 NME9Q86XW9 330 aa15.65■□□□□ 0.1
LPCAT4-202ENST00000562404 PUS7Q96PZ0 661 aaKnown RBP15.65■□□□□ 0.1
LPCAT4-202ENST00000562404 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
LPCAT4-202ENST00000562404 SOX12O15370 315 aa15.64■□□□□ 0.09
LPCAT4-202ENST00000562404 FAM182BQ5T319 152 aa15.64■□□□□ 0.09
LPCAT4-202ENST00000562404 KRT27Q7Z3Y8 459 aa15.64■□□□□ 0.09
LPCAT4-202ENST00000562404 AXIN2Q9Y2T1 843 aa15.64■□□□□ 0.09
LPCAT4-202ENST00000562404 LTN1O94822 1766 aa15.64■□□□□ 0.09
LPCAT4-202ENST00000562404 A0A0G2JS52 829 aa15.63■□□□□ 0.09
LPCAT4-202ENST00000562404 MYT1Q01538 1121 aa15.63■□□□□ 0.09
LPCAT4-202ENST00000562404 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
LPCAT4-202ENST00000562404 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
LPCAT4-202ENST00000562404 MYOM1P52179 1685 aa15.63■□□□□ 0.09
LPCAT4-202ENST00000562404 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
LPCAT4-202ENST00000562404 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
LPCAT4-202ENST00000562404 EDC4Q6P2E9 1401 aaKnown RBP15.62■□□□□ 0.09
LPCAT4-202ENST00000562404 EVA1CP58658 441 aa15.62■□□□□ 0.09
LPCAT4-202ENST00000562404 ARHGEF25Q86VW2 580 aa15.62■□□□□ 0.09
LPCAT4-202ENST00000562404 HDGFL2Q7Z4V5 671 aaPredicted RBP15.61■□□□□ 0.09
LPCAT4-202ENST00000562404 WNK3Q9BYP7 1800 aa15.61■□□□□ 0.09
LPCAT4-202ENST00000562404 PARP4Q9UKK3 1724 aaKnown RBP15.6■□□□□ 0.09
LPCAT4-202ENST00000562404 OVOS2A0A0J9YW53 1432 aa15.6■□□□□ 0.09
LPCAT4-202ENST00000562404 OVOS2Q6IE36 1432 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms