RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 STK11IPQ8N1F8 1099 aa13.45□□□□□ -0.26
RPAP1-204ENST00000562303 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
RPAP1-204ENST00000562303 FILIP1LQ4L180 1135 aa13.44□□□□□ -0.26
RPAP1-204ENST00000562303 ERC1Q8IUD2 1116 aa13.44□□□□□ -0.26
RPAP1-204ENST00000562303 PDCL3Q9H2J4 239 aa13.44□□□□□ -0.26
RPAP1-204ENST00000562303 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
RPAP1-204ENST00000562303 SKIDA1Q1XH10 827 aa13.44□□□□□ -0.26
RPAP1-204ENST00000562303 KINO60870 393 aaKnown RBP13.43□□□□□ -0.26
RPAP1-204ENST00000562303 MTHFSP49914 203 aa13.43□□□□□ -0.26
RPAP1-204ENST00000562303 SMC2O95347 1197 aa13.43□□□□□ -0.26
RPAP1-204ENST00000562303 SMARCE1Q969G3 411 aa13.43□□□□□ -0.26
RPAP1-204ENST00000562303 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
RPAP1-204ENST00000562303 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
RPAP1-204ENST00000562303 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
RPAP1-204ENST00000562303 ZHX3Q9H4I2 956 aa13.42□□□□□ -0.26
RPAP1-204ENST00000562303 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
RPAP1-204ENST00000562303 AAMPQ13685 434 aa13.42□□□□□ -0.26
RPAP1-204ENST00000562303 FMNL2Q96PY5 1086 aa13.42□□□□□ -0.26
RPAP1-204ENST00000562303 PRKAR2BP31323 418 aa13.42□□□□□ -0.26
RPAP1-204ENST00000562303 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
RPAP1-204ENST00000562303 TOP2AP11388 1531 aaKnown RBP13.41□□□□□ -0.26
RPAP1-204ENST00000562303 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
RPAP1-204ENST00000562303 STK38Q15208 465 aa13.41□□□□□ -0.26
RPAP1-204ENST00000562303 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
RPAP1-204ENST00000562303 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
RPAP1-204ENST00000562303 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
RPAP1-204ENST00000562303 SOGA3Q5TF21 947 aa13.4□□□□□ -0.26
RPAP1-204ENST00000562303 ERCC4Q92889 916 aaPredicted RBP13.4□□□□□ -0.26
RPAP1-204ENST00000562303 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
RPAP1-204ENST00000562303 TRIM5Q9C035 493 aa13.4□□□□□ -0.26
RPAP1-204ENST00000562303 GNAI2P04899 355 aa13.4□□□□□ -0.26
RPAP1-204ENST00000562303 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.26
RPAP1-204ENST00000562303 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
RPAP1-204ENST00000562303 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.26
RPAP1-204ENST00000562303 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
RPAP1-204ENST00000562303 PIP4K2BP78356 416 aa13.4□□□□□ -0.26
RPAP1-204ENST00000562303 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
RPAP1-204ENST00000562303 SIL1Q9H173 461 aa13.4□□□□□ -0.26
RPAP1-204ENST00000562303 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 PDCP20941 246 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 NEK4P51957 841 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 TRIM22Q8IYM9 498 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 RNF214Q8ND24 703 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 TCP11L2Q8N4U5 519 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
RPAP1-204ENST00000562303 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
RPAP1-204ENST00000562303 NEFHP12036 1026 aa13.39□□□□□ -0.27
RPAP1-204ENST00000562303 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 PRAM1Q96QH2 718 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 MYL6BP14649 208 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
RPAP1-204ENST00000562303 THEMISQ8N1K5 641 aaPredicted RBP13.38□□□□□ -0.27
RPAP1-204ENST00000562303 C1orf115Q9H7X2 142 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 ZNHIT6Q9NWK9 470 aaKnown RBP13.38□□□□□ -0.27
RPAP1-204ENST00000562303 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 CCDC57Q2TAC2 916 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
RPAP1-204ENST00000562303 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
RPAP1-204ENST00000562303 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
RPAP1-204ENST00000562303 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
RPAP1-204ENST00000562303 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
RPAP1-204ENST00000562303 CNTLNQ9NXG0 1405 aa13.37□□□□□ -0.27
RPAP1-204ENST00000562303 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
RPAP1-204ENST00000562303 CFAP70Q5T0N1 1121 aa13.37□□□□□ -0.27
RPAP1-204ENST00000562303 PNISRQ8TF01 805 aaKnown RBP13.37□□□□□ -0.27
RPAP1-204ENST00000562303 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
RPAP1-204ENST00000562303 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
RPAP1-204ENST00000562303 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
RPAP1-204ENST00000562303 IBSPP21815 317 aaPredicted RBP13.36□□□□□ -0.27
RPAP1-204ENST00000562303 CALRP27797 417 aaKnown RBP13.36□□□□□ -0.27
RPAP1-204ENST00000562303 STK3Q13188 491 aa13.36□□□□□ -0.27
RPAP1-204ENST00000562303 ZSCAN25Q6NSZ9 544 aa13.36□□□□□ -0.27
RPAP1-204ENST00000562303 STIM1Q13586 685 aa13.36□□□□□ -0.27
RPAP1-204ENST00000562303 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
RPAP1-204ENST00000562303 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
RPAP1-204ENST00000562303 ERLIN2O94905 339 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 ZRSR2Q15696 482 aaKnown RBP13.35□□□□□ -0.27
RPAP1-204ENST00000562303 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 MATR3P43243 847 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPAP1-204ENST00000562303 MCM2P49736 904 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 CCP110O43303 1012 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 FIBPO43427 364 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 NASPP49321 788 aaPredicted RBP13.35□□□□□ -0.27
RPAP1-204ENST00000562303 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPAP1-204ENST00000562303 DEF6Q9H4E7 631 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 CYP46A1Q9Y6A2 500 aa13.35□□□□□ -0.27
RPAP1-204ENST00000562303 H0YHG0 523 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 FYCO1Q9BQS8 1478 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 SRCIN1Q9C0H9 1055 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 RRBP1Q9P2E9 1410 aaKnown RBP13.34□□□□□ -0.27
RPAP1-204ENST00000562303 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPAP1-204ENST00000562303 ZNF76P36508 570 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
RPAP1-204ENST00000562303 WIZO95785 1651 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms