RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 PHF8Q9UPP1 1060 aa19.18■□□□□ 0.66
CNN2-204ENST00000562075 ZNF335Q9H4Z2 1342 aaPredicted RBP19.18■□□□□ 0.66
CNN2-204ENST00000562075 ATF3P18847 181 aa19.16■□□□□ 0.66
CNN2-204ENST00000562075 ESCO1Q5FWF5 840 aa19.16■□□□□ 0.66
CNN2-204ENST00000562075 TTC21AQ8NDW8 1320 aa19.16■□□□□ 0.66
CNN2-204ENST00000562075 MSH6P52701 1360 aa19.16■□□□□ 0.66
CNN2-204ENST00000562075 SSH2Q76I76 1423 aa19.16■□□□□ 0.66
CNN2-204ENST00000562075 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
CNN2-204ENST00000562075 COG3Q96JB2 828 aa19.15■□□□□ 0.66
CNN2-204ENST00000562075 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
CNN2-204ENST00000562075 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
CNN2-204ENST00000562075 C1orf167Q5SNV9 1468 aa19.14■□□□□ 0.65
CNN2-204ENST00000562075 XIRP1Q702N8 1843 aaKnown RBP19.14■□□□□ 0.65
CNN2-204ENST00000562075 MTHFSP49914 203 aa19.13■□□□□ 0.65
CNN2-204ENST00000562075 ZRANB1Q9UGI0 708 aa19.13■□□□□ 0.65
CNN2-204ENST00000562075 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
CNN2-204ENST00000562075 KIF1AQ12756 1690 aa19.12■□□□□ 0.65
CNN2-204ENST00000562075 MST1RQ04912 1400 aa19.11■□□□□ 0.65
CNN2-204ENST00000562075 INSRP06213 1382 aa19.11■□□□□ 0.65
CNN2-204ENST00000562075 CADPS2Q86UW7 1296 aa19.11■□□□□ 0.65
CNN2-204ENST00000562075 OVOS2A0A0J9YW53 1432 aa19.1■□□□□ 0.65
CNN2-204ENST00000562075 OVOS2Q6IE36 1432 aa19.1■□□□□ 0.65
CNN2-204ENST00000562075 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
CNN2-204ENST00000562075 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.65
CNN2-204ENST00000562075 PIK3C2AO00443 1686 aa19.08■□□□□ 0.65
CNN2-204ENST00000562075 PSME1Q06323 249 aa19.08■□□□□ 0.64
CNN2-204ENST00000562075 SHPRHQ149N8 1683 aa19.08■□□□□ 0.64
CNN2-204ENST00000562075 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
CNN2-204ENST00000562075 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
CNN2-204ENST00000562075 ADAMTS8Q9UP79 889 aa19.07■□□□□ 0.64
CNN2-204ENST00000562075 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
CNN2-204ENST00000562075 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
CNN2-204ENST00000562075 POLKQ9UBT6 870 aa19.05■□□□□ 0.64
CNN2-204ENST00000562075 SMG6Q86US8 1419 aaKnown RBP19.05■□□□□ 0.64
CNN2-204ENST00000562075 USP54Q70EL1 1684 aa19.05■□□□□ 0.64
CNN2-204ENST00000562075 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
CNN2-204ENST00000562075 COL3A1P02461 1466 aaPredicted RBP19.04■□□□□ 0.64
CNN2-204ENST00000562075 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
CNN2-204ENST00000562075 FOXO3O43524 673 aa19.03■□□□□ 0.64
CNN2-204ENST00000562075 FBLN1P23142 703 aa19.03■□□□□ 0.64
CNN2-204ENST00000562075 NLRP6P59044 892 aa19.03■□□□□ 0.64
CNN2-204ENST00000562075 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
CNN2-204ENST00000562075 ABTB2Q8N961 1025 aa19.02■□□□□ 0.64
CNN2-204ENST00000562075 NUDCQ9Y266 331 aa19.02■□□□□ 0.64
CNN2-204ENST00000562075 EMILIN1Q9Y6C2 1016 aa19.01■□□□□ 0.63
CNN2-204ENST00000562075 PNPLA6Q8IY17 1366 aa19.01■□□□□ 0.63
CNN2-204ENST00000562075 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
CNN2-204ENST00000562075 MARF1Q9Y4F3 1742 aaKnown RBP19■□□□□ 0.63
CNN2-204ENST00000562075 XPCQ01831 940 aaPredicted RBP19■□□□□ 0.63
CNN2-204ENST00000562075 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
CNN2-204ENST00000562075 NUTM2GQ5VZR2 741 aa19■□□□□ 0.63
CNN2-204ENST00000562075 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
CNN2-204ENST00000562075 KRT28Q7Z3Y7 464 aa19■□□□□ 0.63
CNN2-204ENST00000562075 DIAPH1O60610 1272 aaKnown RBP18.99■□□□□ 0.63
CNN2-204ENST00000562075 SENP3-EIF4A1A0A087X0R7 540 aa18.98■□□□□ 0.63
CNN2-204ENST00000562075 SOX12O15370 315 aa18.98■□□□□ 0.63
CNN2-204ENST00000562075 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
CNN2-204ENST00000562075 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
CNN2-204ENST00000562075 CCDC146Q8IYE0 955 aa18.97■□□□□ 0.63
CNN2-204ENST00000562075 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
CNN2-204ENST00000562075 U2SURPO15042 1029 aaKnown RBP18.96■□□□□ 0.63
CNN2-204ENST00000562075 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
CNN2-204ENST00000562075 LTBP4Q8N2S1 1624 aa18.95■□□□□ 0.62
CNN2-204ENST00000562075 LMOD2Q6P5Q4 547 aa18.94■□□□□ 0.62
CNN2-204ENST00000562075 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
CNN2-204ENST00000562075 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
CNN2-204ENST00000562075 MAP3K19Q56UN5 1328 aa18.94■□□□□ 0.62
CNN2-204ENST00000562075 PEAK1Q9H792 1746 aa18.94■□□□□ 0.62
CNN2-204ENST00000562075 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
CNN2-204ENST00000562075 ALS2Q96Q42 1657 aa18.93■□□□□ 0.62
CNN2-204ENST00000562075 DDX17Q92841 729 aaKnown RBP18.93■□□□□ 0.62
CNN2-204ENST00000562075 PXDNQ92626 1479 aa18.92■□□□□ 0.62
CNN2-204ENST00000562075 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
CNN2-204ENST00000562075 AMPHP49418 695 aa18.91■□□□□ 0.62
CNN2-204ENST00000562075 FLT4P35916 1363 aa18.91■□□□□ 0.62
CNN2-204ENST00000562075 SLIT3O75094 1523 aa18.9■□□□□ 0.62
CNN2-204ENST00000562075 NFAT5O94916 1531 aa18.9■□□□□ 0.62
CNN2-204ENST00000562075 IL13P35225 146 aa18.9■□□□□ 0.62
CNN2-204ENST00000562075 KCNH5Q8NCM2 988 aa18.9■□□□□ 0.62
CNN2-204ENST00000562075 TNS3Q68CZ2 1445 aa18.9■□□□□ 0.62
CNN2-204ENST00000562075 APAF1O14727 1248 aa18.89■□□□□ 0.61
CNN2-204ENST00000562075 USP19O94966 1318 aa18.89■□□□□ 0.61
CNN2-204ENST00000562075 KIF24Q5T7B8 1368 aa18.89■□□□□ 0.61
CNN2-204ENST00000562075 NGEFQ8N5V2 710 aa18.88■□□□□ 0.61
CNN2-204ENST00000562075 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
CNN2-204ENST00000562075 RTL1A6NKG5 1358 aa18.88■□□□□ 0.61
CNN2-204ENST00000562075 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
CNN2-204ENST00000562075 LTN1O94822 1766 aa18.87■□□□□ 0.61
CNN2-204ENST00000562075 EIF4A2Q14240 407 aaKnown RBP18.87■□□□□ 0.61
CNN2-204ENST00000562075 ARHGEF10O15013 1369 aa18.86■□□□□ 0.61
CNN2-204ENST00000562075 MAPK8IP3Q9UPT6 1336 aa18.86■□□□□ 0.61
CNN2-204ENST00000562075 PLEKHG5O94827 1062 aa18.86■□□□□ 0.61
CNN2-204ENST00000562075 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
CNN2-204ENST00000562075 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
CNN2-204ENST00000562075 SPATA31A3Q5VYP0 1347 aa18.85■□□□□ 0.61
CNN2-204ENST00000562075 FCHSD2O94868 740 aa18.85■□□□□ 0.61
CNN2-204ENST00000562075 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
CNN2-204ENST00000562075 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
CNN2-204ENST00000562075 GCP02774 474 aa18.84■□□□□ 0.61
CNN2-204ENST00000562075 HOXC9P31274 260 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms