RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 TRPM1Q7Z4N2 1603 aa33.7■■■□□ 2.99
TMEM170A-202ENST00000561878 VPS72Q15906 364 aa33.69■■■□□ 2.98
TMEM170A-202ENST00000561878 POLR3AO14802 1390 aaPredicted RBP33.69■■■□□ 2.98
TMEM170A-202ENST00000561878 CRYBG1Q9Y4K1 1723 aa33.68■■■□□ 2.98
TMEM170A-202ENST00000561878 COL14A1Q05707 1796 aaKnown RBP33.67■■■□□ 2.98
TMEM170A-202ENST00000561878 FAM83GA6ND36 823 aa33.67■■■□□ 2.98
TMEM170A-202ENST00000561878 ACEP12821 1306 aa33.66■■■□□ 2.98
TMEM170A-202ENST00000561878 SRPK2P78362 688 aaKnown RBP33.66■■■□□ 2.98
TMEM170A-202ENST00000561878 PLEKHG3A1L390 1219 aa33.65■■■□□ 2.98
TMEM170A-202ENST00000561878 CCDC9Q9Y3X0 531 aaKnown RBP33.65■■■□□ 2.98
TMEM170A-202ENST00000561878 NRAPQ86VF7 1730 aa33.64■■■□□ 2.98
TMEM170A-202ENST00000561878 NBPF8Q3BBV2 869 aa33.62■■■□□ 2.97
TMEM170A-202ENST00000561878 ROCK2O75116 1388 aaKnown RBP33.61■■■□□ 2.97
TMEM170A-202ENST00000561878 PPIP5K1Q6PFW1 1433 aa33.61■■■□□ 2.97
TMEM170A-202ENST00000561878 BTG4Q9NY30 223 aa33.6■■■□□ 2.97
TMEM170A-202ENST00000561878 PHRF1Q9P1Y6 1649 aaKnown RBP33.59■■■□□ 2.97
TMEM170A-202ENST00000561878 CABP2Q9NPB3 220 aa33.58■■■□□ 2.97
TMEM170A-202ENST00000561878 PRDM11Q9NQV5 511 aa33.57■■■□□ 2.96
TMEM170A-202ENST00000561878 BRWD3Q6RI45 1802 aa33.56■■■□□ 2.96
TMEM170A-202ENST00000561878 CCDC125Q86Z20 511 aa33.56■■■□□ 2.96
TMEM170A-202ENST00000561878 SEPT12Q8IYM1 358 aa33.56■■■□□ 2.96
TMEM170A-202ENST00000561878 EVC2Q86UK5 1308 aa33.53■■■□□ 2.96
TMEM170A-202ENST00000561878 ONECUT3O60422 494 aaPredicted RBP33.53■■■□□ 2.96
TMEM170A-202ENST00000561878 NUTM2GQ5VZR2 741 aa33.52■■■□□ 2.96
TMEM170A-202ENST00000561878 ABTB2Q8N961 1025 aa33.52■■■□□ 2.96
TMEM170A-202ENST00000561878 BRD4O60885 1362 aaPredicted RBP33.51■■■□□ 2.96
TMEM170A-202ENST00000561878 KIAA0232Q92628 1395 aa33.5■■■□□ 2.95
TMEM170A-202ENST00000561878 EP400Q96L91 3159 aa33.5■■■□□ 2.95
TMEM170A-202ENST00000561878 A0A0G2JS52 829 aa33.48■■■□□ 2.95
TMEM170A-202ENST00000561878 MYT1Q01538 1121 aa33.48■■■□□ 2.95
TMEM170A-202ENST00000561878 TRIM26Q12899 539 aaPredicted RBP33.48■■■□□ 2.95
TMEM170A-202ENST00000561878 TONSLQ96HA7 1378 aa33.47■■■□□ 2.95
TMEM170A-202ENST00000561878 CABP1Q9NZU7 370 aa33.46■■■□□ 2.95
TMEM170A-202ENST00000561878 NRKQ7Z2Y5 1582 aa33.46■■■□□ 2.95
TMEM170A-202ENST00000561878 ZC3H6P61129 1189 aaKnown RBP33.45■■■□□ 2.95
TMEM170A-202ENST00000561878 KRT27Q7Z3Y8 459 aa33.45■■■□□ 2.95
TMEM170A-202ENST00000561878 NLRP13Q86W25 1043 aa33.45■■■□□ 2.95
TMEM170A-202ENST00000561878 BLMP54132 1417 aaPredicted RBP33.45■■■□□ 2.94
TMEM170A-202ENST00000561878 FAM98CQ17RN3 349 aaKnown RBP33.44■■■□□ 2.94
TMEM170A-202ENST00000561878 USP19O94966 1318 aa33.44■■■□□ 2.94
TMEM170A-202ENST00000561878 SPATA31A5Q5VU36 1347 aa33.44■■■□□ 2.94
TMEM170A-202ENST00000561878 SPATA31A7Q8IWB4 1347 aa33.44■■■□□ 2.94
TMEM170A-202ENST00000561878 CHRNA2Q15822 529 aa33.43■■■□□ 2.94
TMEM170A-202ENST00000561878 USP6P35125 1406 aa33.43■■■□□ 2.94
TMEM170A-202ENST00000561878 CPDO75976 1380 aa33.39■■■□□ 2.94
TMEM170A-202ENST00000561878 SF3B2Q13435 895 aaKnown RBP33.38■■■□□ 2.93
TMEM170A-202ENST00000561878 CARD11Q9BXL7 1154 aa33.38■■■□□ 2.93
TMEM170A-202ENST00000561878 STRN4Q9NRL3 753 aa33.37■■■□□ 2.93
TMEM170A-202ENST00000561878 SBNO2Q9Y2G9 1366 aa33.36■■■□□ 2.93
TMEM170A-202ENST00000561878 THSD7AQ9UPZ6 1657 aa33.35■■■□□ 2.93
TMEM170A-202ENST00000561878 SPATA31A1Q5TZJ5 1347 aa33.34■■■□□ 2.93
TMEM170A-202ENST00000561878 GCP02774 474 aa33.34■■■□□ 2.93
TMEM170A-202ENST00000561878 EVA1CP58658 441 aa33.34■■■□□ 2.93
TMEM170A-202ENST00000561878 ZNF692Q9BU19 519 aaPredicted RBP33.34■■■□□ 2.93
TMEM170A-202ENST00000561878 AKAP12Q02952 1782 aa33.33■■■□□ 2.93
TMEM170A-202ENST00000561878 LMO7Q8WWI1 1683 aa33.33■■■□□ 2.93
TMEM170A-202ENST00000561878 NLRP6P59044 892 aa33.32■■■□□ 2.92
TMEM170A-202ENST00000561878 SSH2Q76I76 1423 aa33.32■■■□□ 2.92
TMEM170A-202ENST00000561878 ZRANB1Q9UGI0 708 aa33.31■■■□□ 2.92
TMEM170A-202ENST00000561878 PIK3C2AO00443 1686 aa33.3■■■□□ 2.92
TMEM170A-202ENST00000561878 CAMTA1Q9Y6Y1 1673 aa33.3■■■□□ 2.92
TMEM170A-202ENST00000561878 SLIT3O75094 1523 aa33.29■■■□□ 2.92
TMEM170A-202ENST00000561878 TTC21BQ7Z4L5 1316 aa33.25■■■□□ 2.91
TMEM170A-202ENST00000561878 TTC21AQ8NDW8 1320 aa33.25■■■□□ 2.91
TMEM170A-202ENST00000561878 USP35Q9P2H5 1018 aa33.24■■■□□ 2.91
TMEM170A-202ENST00000561878 CPSF1Q10570 1443 aaKnown RBP33.24■■■□□ 2.91
TMEM170A-202ENST00000561878 DEFB132Q7Z7B7 95 aa33.23■■■□□ 2.91
TMEM170A-202ENST00000561878 KTN1Q86UP2 1357 aaKnown RBP33.22■■■□□ 2.91
TMEM170A-202ENST00000561878 LARP1Q6PKG0 1096 aaKnown RBP33.22■■■□□ 2.91
TMEM170A-202ENST00000561878 BARGINQ6ZT62 677 aa33.22■■■□□ 2.91
TMEM170A-202ENST00000561878 COL5A2P05997 1499 aaPredicted RBP33.22■■■□□ 2.91
TMEM170A-202ENST00000561878 RGPD1P0DJD0 1748 aa33.22■■■□□ 2.91
TMEM170A-202ENST00000561878 ZBTB7CA1YPR0 619 aa33.21■■■□□ 2.91
TMEM170A-202ENST00000561878 MON2Q7Z3U7 1717 aa33.2■■■□□ 2.91
TMEM170A-202ENST00000561878 BAG6P46379 1132 aa33.2■■■□□ 2.91
TMEM170A-202ENST00000561878 AATKQ6ZMQ8 1374 aa33.2■■■□□ 2.9
TMEM170A-202ENST00000561878 TCP11L2Q8N4U5 519 aa33.19■■■□□ 2.9
TMEM170A-202ENST00000561878 KCNH5Q8NCM2 988 aa33.18■■■□□ 2.9
TMEM170A-202ENST00000561878 THRAP3Q9Y2W1 955 aaKnown RBP33.18■■■□□ 2.9
TMEM170A-202ENST00000561878 FAM182BQ5T319 152 aa33.17■■■□□ 2.9
TMEM170A-202ENST00000561878 CRB1P82279 1406 aa33.15■■■□□ 2.9
TMEM170A-202ENST00000561878 FAM196AQ6ZSG2 479 aa33.13■■■□□ 2.89
TMEM170A-202ENST00000561878 TMC1Q8TDI8 760 aa33.13■■■□□ 2.89
TMEM170A-202ENST00000561878 COL18A1P39060 1754 aa33.12■■■□□ 2.89
TMEM170A-202ENST00000561878 PDE3BQ13370 1112 aa33.12■■■□□ 2.89
TMEM170A-202ENST00000561878 HDGFL2Q7Z4V5 671 aaPredicted RBP33.12■■■□□ 2.89
TMEM170A-202ENST00000561878 PUS7Q96PZ0 661 aaKnown RBP33.12■■■□□ 2.89
TMEM170A-202ENST00000561878 SLC24A1O60721 1099 aa33.1■■■□□ 2.89
TMEM170A-202ENST00000561878 TNS1Q9HBL0 1735 aaKnown RBP33.09■■■□□ 2.89
TMEM170A-202ENST00000561878 PARP4Q9UKK3 1724 aaKnown RBP33.09■■■□□ 2.89
TMEM170A-202ENST00000561878 ARHGEF25Q86VW2 580 aa33.09■■■□□ 2.89
TMEM170A-202ENST00000561878 CD163L1Q9NR16 1453 aa33.09■■■□□ 2.89
TMEM170A-202ENST00000561878 SOX12O15370 315 aa33.07■■■□□ 2.88
TMEM170A-202ENST00000561878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.07■■■□□ 2.88
TMEM170A-202ENST00000561878 TERF2IPQ9NYB0 399 aa33.07■■■□□ 2.88
TMEM170A-202ENST00000561878 NFAT5O94916 1531 aa33.07■■■□□ 2.88
TMEM170A-202ENST00000561878 USP54Q70EL1 1684 aa33.07■■■□□ 2.88
TMEM170A-202ENST00000561878 DISP2A7MBM2 1401 aa33.06■■■□□ 2.88
TMEM170A-202ENST00000561878 TOM1L2Q6ZVM7 507 aa33.06■■■□□ 2.88
TMEM170A-202ENST00000561878 ST20-MTHFSA0A0A6YYL1 179 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms