RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.4
IRF9-213ENST00000561342 NRXN1Q9ULB1 1477 aa17.51■□□□□ 0.39
IRF9-213ENST00000561342 RGL3Q3MIN7 710 aa17.51■□□□□ 0.39
IRF9-213ENST00000561342 FMN2Q9NZ56 1722 aa17.5■□□□□ 0.39
IRF9-213ENST00000561342 PMFBP1Q8TBY8 1022 aa17.5■□□□□ 0.39
IRF9-213ENST00000561342 CAMTA1Q9Y6Y1 1673 aa17.5■□□□□ 0.39
IRF9-213ENST00000561342 COL14A1Q05707 1796 aaKnown RBP17.5■□□□□ 0.39
IRF9-213ENST00000561342 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
IRF9-213ENST00000561342 GIGYF1O75420 1035 aaPredicted RBP17.49■□□□□ 0.39
IRF9-213ENST00000561342 TMEM132EQ6IEE7 984 aa17.49■□□□□ 0.39
IRF9-213ENST00000561342 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
IRF9-213ENST00000561342 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
IRF9-213ENST00000561342 STRN4Q9NRL3 753 aa17.48■□□□□ 0.39
IRF9-213ENST00000561342 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
IRF9-213ENST00000561342 RREB1Q92766 1687 aa17.48■□□□□ 0.39
IRF9-213ENST00000561342 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
IRF9-213ENST00000561342 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
IRF9-213ENST00000561342 C11orf95C9JLR9 678 aaPredicted RBP17.46■□□□□ 0.39
IRF9-213ENST00000561342 BARGINQ6ZT62 677 aa17.46■□□□□ 0.39
IRF9-213ENST00000561342 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
IRF9-213ENST00000561342 SYT17Q9BSW7 474 aa17.45■□□□□ 0.38
IRF9-213ENST00000561342 YTHDC2Q9H6S0 1430 aaKnown RBP17.45■□□□□ 0.38
IRF9-213ENST00000561342 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
IRF9-213ENST00000561342 EVA1CP58658 441 aa17.44■□□□□ 0.38
IRF9-213ENST00000561342 FHDC1Q9C0D6 1143 aaPredicted RBP17.44■□□□□ 0.38
IRF9-213ENST00000561342 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
IRF9-213ENST00000561342 KNDC1Q76NI1 1749 aa17.44■□□□□ 0.38
IRF9-213ENST00000561342 UTRNP46939 3433 aa17.43■□□□□ 0.38
IRF9-213ENST00000561342 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
IRF9-213ENST00000561342 NRKQ7Z2Y5 1582 aa17.42■□□□□ 0.38
IRF9-213ENST00000561342 PTGER2P43116 358 aa17.42■□□□□ 0.38
IRF9-213ENST00000561342 PLSCR1O15162 318 aa17.41■□□□□ 0.38
IRF9-213ENST00000561342 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
IRF9-213ENST00000561342 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
IRF9-213ENST00000561342 BCL11BQ9C0K0 894 aaPredicted RBP17.41■□□□□ 0.38
IRF9-213ENST00000561342 ATF5Q9Y2D1 282 aaPredicted RBP17.41■□□□□ 0.38
IRF9-213ENST00000561342 ANKARQ7Z5J8 1434 aa17.4■□□□□ 0.38
IRF9-213ENST00000561342 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
IRF9-213ENST00000561342 TCP11L2Q8N4U5 519 aa17.4■□□□□ 0.38
IRF9-213ENST00000561342 ANO8Q9HCE9 1232 aaPredicted RBP17.4■□□□□ 0.38
IRF9-213ENST00000561342 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
IRF9-213ENST00000561342 PDGFDQ9GZP0 370 aaPredicted RBP17.39■□□□□ 0.37
IRF9-213ENST00000561342 STAC3Q96MF2 364 aa17.38■□□□□ 0.37
IRF9-213ENST00000561342 RAB3GAP2Q9H2M9 1393 aa17.38■□□□□ 0.37
IRF9-213ENST00000561342 PRAM1Q96QH2 718 aa17.37■□□□□ 0.37
IRF9-213ENST00000561342 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
IRF9-213ENST00000561342 NGDNQ8NEJ9 315 aaKnown RBP17.36■□□□□ 0.37
IRF9-213ENST00000561342 POGKQ9P215 609 aa17.36■□□□□ 0.37
IRF9-213ENST00000561342 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
IRF9-213ENST00000561342 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
IRF9-213ENST00000561342 GPR162Q16538 588 aa17.35■□□□□ 0.37
IRF9-213ENST00000561342 MTFR1LQ9H019 292 aa17.35■□□□□ 0.37
IRF9-213ENST00000561342 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
IRF9-213ENST00000561342 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
IRF9-213ENST00000561342 STK32BQ9NY57 414 aa17.34■□□□□ 0.37
IRF9-213ENST00000561342 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.37
IRF9-213ENST00000561342 LARP1Q6PKG0 1096 aaKnown RBP17.33■□□□□ 0.36
IRF9-213ENST00000561342 MYOM1P52179 1685 aa17.32■□□□□ 0.36
IRF9-213ENST00000561342 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
IRF9-213ENST00000561342 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
IRF9-213ENST00000561342 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
IRF9-213ENST00000561342 EIF3AQ14152 1382 aaKnown RBP17.32■□□□□ 0.36
IRF9-213ENST00000561342 TRPM3Q9HCF6 1732 aaPredicted RBP17.32■□□□□ 0.36
IRF9-213ENST00000561342 ALS2Q96Q42 1657 aa17.32■□□□□ 0.36
IRF9-213ENST00000561342 CEP350Q5VT06 3117 aa17.31■□□□□ 0.36
IRF9-213ENST00000561342 CASZ1Q86V15 1759 aa17.31■□□□□ 0.36
IRF9-213ENST00000561342 ARXQ96QS3 562 aa17.31■□□□□ 0.36
IRF9-213ENST00000561342 SLC15A2Q16348 729 aa17.3■□□□□ 0.36
IRF9-213ENST00000561342 PROM2Q8N271 834 aa17.29■□□□□ 0.36
IRF9-213ENST00000561342 CHD4Q14839 1912 aa17.28■□□□□ 0.36
IRF9-213ENST00000561342 SGIP1Q9BQI5 828 aa17.28■□□□□ 0.36
IRF9-213ENST00000561342 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
IRF9-213ENST00000561342 ADGRB1O14514 1584 aa17.28■□□□□ 0.36
IRF9-213ENST00000561342 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
IRF9-213ENST00000561342 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
IRF9-213ENST00000561342 DDB1Q16531 1140 aa17.26■□□□□ 0.35
IRF9-213ENST00000561342 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
IRF9-213ENST00000561342 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
IRF9-213ENST00000561342 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
IRF9-213ENST00000561342 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
IRF9-213ENST00000561342 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
IRF9-213ENST00000561342 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
IRF9-213ENST00000561342 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
IRF9-213ENST00000561342 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
IRF9-213ENST00000561342 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
IRF9-213ENST00000561342 CRYBG1Q9Y4K1 1723 aa17.23■□□□□ 0.35
IRF9-213ENST00000561342 MINK1Q8N4C8 1332 aaPredicted RBP17.22■□□□□ 0.35
IRF9-213ENST00000561342 HSPA6P17066 643 aa17.22■□□□□ 0.35
IRF9-213ENST00000561342 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
IRF9-213ENST00000561342 ATP7BP35670 1465 aa17.21■□□□□ 0.35
IRF9-213ENST00000561342 CPDO75976 1380 aa17.21■□□□□ 0.35
IRF9-213ENST00000561342 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
IRF9-213ENST00000561342 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.34
IRF9-213ENST00000561342 CRB1P82279 1406 aa17.19■□□□□ 0.34
IRF9-213ENST00000561342 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
IRF9-213ENST00000561342 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
IRF9-213ENST00000561342 GRIN3BO60391 1043 aa17.17■□□□□ 0.34
IRF9-213ENST00000561342 BCL9O00512 1426 aa17.16■□□□□ 0.34
IRF9-213ENST00000561342 POLD1P28340 1107 aa17.16■□□□□ 0.34
IRF9-213ENST00000561342 MARCH10Q8NA82 808 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms