RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ROCK2O75116 1388 aaKnown RBP24.73■■□□□ 1.55
CDC42BPB-208ENST00000561271 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
CDC42BPB-208ENST00000561271 RALGAPBQ86X10 1494 aa24.7■■□□□ 1.55
CDC42BPB-208ENST00000561271 POLR3AO14802 1390 aaPredicted RBP24.7■■□□□ 1.55
CDC42BPB-208ENST00000561271 PAK3O75914 559 aaPredicted RBP24.69■■□□□ 1.54
CDC42BPB-208ENST00000561271 UPF1Q92900 1129 aaKnown RBP eCLIP24.69■■□□□ 1.54
CDC42BPB-208ENST00000561271 PPIP5K1Q6PFW1 1433 aa24.69■■□□□ 1.54
CDC42BPB-208ENST00000561271 NRKQ7Z2Y5 1582 aa24.68■■□□□ 1.54
CDC42BPB-208ENST00000561271 EP400Q96L91 3159 aa24.67■■□□□ 1.54
CDC42BPB-208ENST00000561271 SRPK2P78362 688 aaKnown RBP24.67■■□□□ 1.54
CDC42BPB-208ENST00000561271 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
CDC42BPB-208ENST00000561271 UNC5CLQ8IV45 518 aa24.67■■□□□ 1.54
CDC42BPB-208ENST00000561271 ACEP12821 1306 aa24.66■■□□□ 1.54
CDC42BPB-208ENST00000561271 CCDC61Q9Y6R9 512 aa24.66■■□□□ 1.54
CDC42BPB-208ENST00000561271 TONSLQ96HA7 1378 aa24.66■■□□□ 1.54
CDC42BPB-208ENST00000561271 CABP2Q9NPB3 220 aa24.65■■□□□ 1.54
CDC42BPB-208ENST00000561271 GJD4Q96KN9 370 aaPredicted RBP24.64■■□□□ 1.54
CDC42BPB-208ENST00000561271 PIK3C2AO00443 1686 aa24.63■■□□□ 1.53
CDC42BPB-208ENST00000561271 MON2Q7Z3U7 1717 aa24.63■■□□□ 1.53
CDC42BPB-208ENST00000561271 PLEKHG3A1L390 1219 aa24.62■■□□□ 1.53
CDC42BPB-208ENST00000561271 ATAD2Q6PL18 1390 aa24.62■■□□□ 1.53
CDC42BPB-208ENST00000561271 FAM83GA6ND36 823 aa24.6■■□□□ 1.53
CDC42BPB-208ENST00000561271 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
CDC42BPB-208ENST00000561271 LMO7Q8WWI1 1683 aa24.57■■□□□ 1.52
CDC42BPB-208ENST00000561271 VPS72Q15906 364 aa24.57■■□□□ 1.52
CDC42BPB-208ENST00000561271 EVC2Q86UK5 1308 aa24.57■■□□□ 1.52
CDC42BPB-208ENST00000561271 USP6P35125 1406 aa24.56■■□□□ 1.52
CDC42BPB-208ENST00000561271 CCDC9Q9Y3X0 531 aaKnown RBP24.56■■□□□ 1.52
CDC42BPB-208ENST00000561271 KIAA0232Q92628 1395 aa24.55■■□□□ 1.52
CDC42BPB-208ENST00000561271 BTG4Q9NY30 223 aa24.55■■□□□ 1.52
CDC42BPB-208ENST00000561271 RGPD5Q99666 1765 aa24.54■■□□□ 1.52
CDC42BPB-208ENST00000561271 THSD7AQ9UPZ6 1657 aa24.54■■□□□ 1.52
CDC42BPB-208ENST00000561271 PRDM11Q9NQV5 511 aa24.54■■□□□ 1.52
CDC42BPB-208ENST00000561271 CARD11Q9BXL7 1154 aa24.52■■□□□ 1.52
CDC42BPB-208ENST00000561271 CABP1Q9NZU7 370 aa24.52■■□□□ 1.52
CDC42BPB-208ENST00000561271 SBNO2Q9Y2G9 1366 aa24.52■■□□□ 1.52
CDC42BPB-208ENST00000561271 ABTB2Q8N961 1025 aa24.51■■□□□ 1.51
CDC42BPB-208ENST00000561271 SLIT3O75094 1523 aa24.51■■□□□ 1.51
CDC42BPB-208ENST00000561271 USP19O94966 1318 aa24.5■■□□□ 1.51
CDC42BPB-208ENST00000561271 CHRNA2Q15822 529 aa24.49■■□□□ 1.51
CDC42BPB-208ENST00000561271 BRD4O60885 1362 aaPredicted RBP24.49■■□□□ 1.51
CDC42BPB-208ENST00000561271 WNK3Q9BYP7 1800 aa24.49■■□□□ 1.51
CDC42BPB-208ENST00000561271 ZC3H6P61129 1189 aaKnown RBP24.48■■□□□ 1.51
CDC42BPB-208ENST00000561271 SSH2Q76I76 1423 aa24.48■■□□□ 1.51
CDC42BPB-208ENST00000561271 COL18A1P39060 1754 aa24.47■■□□□ 1.51
CDC42BPB-208ENST00000561271 USP54Q70EL1 1684 aa24.47■■□□□ 1.51
CDC42BPB-208ENST00000561271 CAMTA1Q9Y6Y1 1673 aa24.47■■□□□ 1.51
CDC42BPB-208ENST00000561271 SEPT12Q8IYM1 358 aa24.47■■□□□ 1.51
CDC42BPB-208ENST00000561271 LTN1O94822 1766 aa24.46■■□□□ 1.51
CDC42BPB-208ENST00000561271 RGPD1P0DJD0 1748 aa24.45■■□□□ 1.5
CDC42BPB-208ENST00000561271 A0A0G2JS52 829 aa24.44■■□□□ 1.5
CDC42BPB-208ENST00000561271 MYT1Q01538 1121 aa24.44■■□□□ 1.5
CDC42BPB-208ENST00000561271 CPDO75976 1380 aa24.43■■□□□ 1.5
CDC42BPB-208ENST00000561271 SPATA31A5Q5VU36 1347 aa24.43■■□□□ 1.5
CDC42BPB-208ENST00000561271 SPATA31A7Q8IWB4 1347 aa24.43■■□□□ 1.5
CDC42BPB-208ENST00000561271 FAM98CQ17RN3 349 aaKnown RBP24.43■■□□□ 1.5
CDC42BPB-208ENST00000561271 NLRP13Q86W25 1043 aa24.43■■□□□ 1.5
CDC42BPB-208ENST00000561271 CPSF1Q10570 1443 aaKnown RBP24.43■■□□□ 1.5
CDC42BPB-208ENST00000561271 TNS1Q9HBL0 1735 aaKnown RBP24.42■■□□□ 1.5
CDC42BPB-208ENST00000561271 ONECUT3O60422 494 aaPredicted RBP24.41■■□□□ 1.5
CDC42BPB-208ENST00000561271 STRN4Q9NRL3 753 aa24.41■■□□□ 1.5
CDC42BPB-208ENST00000561271 CD163L1Q9NR16 1453 aa24.4■■□□□ 1.5
CDC42BPB-208ENST00000561271 PARP4Q9UKK3 1724 aaKnown RBP24.39■■□□□ 1.5
CDC42BPB-208ENST00000561271 KTN1Q86UP2 1357 aaKnown RBP24.39■■□□□ 1.49
CDC42BPB-208ENST00000561271 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
CDC42BPB-208ENST00000561271 BLMP54132 1417 aaPredicted RBP24.38■■□□□ 1.49
CDC42BPB-208ENST00000561271 GCP02774 474 aa24.38■■□□□ 1.49
CDC42BPB-208ENST00000561271 NLRP6P59044 892 aa24.38■■□□□ 1.49
CDC42BPB-208ENST00000561271 TTC21BQ7Z4L5 1316 aa24.37■■□□□ 1.49
CDC42BPB-208ENST00000561271 NFAT5O94916 1531 aa24.37■■□□□ 1.49
CDC42BPB-208ENST00000561271 KRT27Q7Z3Y8 459 aa24.37■■□□□ 1.49
CDC42BPB-208ENST00000561271 SPATA31A1Q5TZJ5 1347 aa24.36■■□□□ 1.49
CDC42BPB-208ENST00000561271 ZBTB7CA1YPR0 619 aa24.35■■□□□ 1.49
CDC42BPB-208ENST00000561271 ZNF692Q9BU19 519 aaPredicted RBP24.34■■□□□ 1.49
CDC42BPB-208ENST00000561271 TTC21AQ8NDW8 1320 aa24.34■■□□□ 1.49
CDC42BPB-208ENST00000561271 LRRC37A3O60309 1634 aa24.33■■□□□ 1.49
CDC42BPB-208ENST00000561271 CCDC125Q86Z20 511 aa24.32■■□□□ 1.48
CDC42BPB-208ENST00000561271 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
CDC42BPB-208ENST00000561271 USP35Q9P2H5 1018 aa24.32■■□□□ 1.48
CDC42BPB-208ENST00000561271 ST20-MTHFSA0A0A6YYL1 179 aa24.31■■□□□ 1.48
CDC42BPB-208ENST00000561271 EVA1CP58658 441 aa24.31■■□□□ 1.48
CDC42BPB-208ENST00000561271 LARP1Q6PKG0 1096 aaKnown RBP24.31■■□□□ 1.48
CDC42BPB-208ENST00000561271 TMC1Q8TDI8 760 aa24.31■■□□□ 1.48
CDC42BPB-208ENST00000561271 SBF2Q86WG5 1849 aa24.31■■□□□ 1.48
CDC42BPB-208ENST00000561271 MYOM1P52179 1685 aa24.3■■□□□ 1.48
CDC42BPB-208ENST00000561271 USP47Q96K76 1375 aa24.3■■□□□ 1.48
CDC42BPB-208ENST00000561271 TESK2Q96S53 571 aa24.3■■□□□ 1.48
CDC42BPB-208ENST00000561271 KIF20BQ96Q89 1820 aa24.3■■□□□ 1.48
CDC42BPB-208ENST00000561271 A0A1W2PP64 1363 aa24.29■■□□□ 1.48
CDC42BPB-208ENST00000561271 AATKQ6ZMQ8 1374 aa24.29■■□□□ 1.48
CDC42BPB-208ENST00000561271 SOX12O15370 315 aa24.28■■□□□ 1.48
CDC42BPB-208ENST00000561271 FAM182BQ5T319 152 aa24.28■■□□□ 1.48
CDC42BPB-208ENST00000561271 ABCC6O95255 1503 aa24.28■■□□□ 1.48
CDC42BPB-208ENST00000561271 CRB1P82279 1406 aa24.27■■□□□ 1.48
CDC42BPB-208ENST00000561271 EDC4Q6P2E9 1401 aaKnown RBP24.27■■□□□ 1.48
CDC42BPB-208ENST00000561271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.27■■□□□ 1.48
CDC42BPB-208ENST00000561271 SLC12A5Q9H2X9 1139 aa24.27■■□□□ 1.48
CDC42BPB-208ENST00000561271 DEFB132Q7Z7B7 95 aa24.25■■□□□ 1.47
CDC42BPB-208ENST00000561271 ZRANB1Q9UGI0 708 aa24.25■■□□□ 1.47
CDC42BPB-208ENST00000561271 PEAK1Q9H792 1746 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms