RNA–Protein interactions for RNA: ENST00000560884.5

CPNE6-219, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-219ENST00000560884 EVC2Q86UK5 1308 aa18.71■□□□□ 0.59
CPNE6-219ENST00000560884 BCL9LQ86UU0 1499 aa18.7■□□□□ 0.58
CPNE6-219ENST00000560884 CDK12Q9NYV4 1490 aaPredicted RBP18.7■□□□□ 0.58
CPNE6-219ENST00000560884 FNBP4Q8N3X1 1017 aaPredicted RBP18.69■□□□□ 0.58
CPNE6-219ENST00000560884 CABLES1Q8TDN4 633 aa18.69■□□□□ 0.58
CPNE6-219ENST00000560884 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
CPNE6-219ENST00000560884 PIK3C2AO00443 1686 aa18.69■□□□□ 0.58
CPNE6-219ENST00000560884 COL14A1Q05707 1796 aaKnown RBP18.68■□□□□ 0.58
CPNE6-219ENST00000560884 ATRNO75882 1429 aa18.68■□□□□ 0.58
CPNE6-219ENST00000560884 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
CPNE6-219ENST00000560884 USP6P35125 1406 aa18.67■□□□□ 0.58
CPNE6-219ENST00000560884 LMOD2Q6P5Q4 547 aa18.67■□□□□ 0.58
CPNE6-219ENST00000560884 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
CPNE6-219ENST00000560884 ATAD2Q6PL18 1390 aa18.65■□□□□ 0.58
CPNE6-219ENST00000560884 RGS12O14924 1447 aa18.65■□□□□ 0.58
CPNE6-219ENST00000560884 CABP1Q9NZU7 370 aa18.64■□□□□ 0.57
CPNE6-219ENST00000560884 USP21Q9UK80 565 aa18.64■□□□□ 0.57
CPNE6-219ENST00000560884 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
CPNE6-219ENST00000560884 GLI3P10071 1580 aa18.64■□□□□ 0.57
CPNE6-219ENST00000560884 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
CPNE6-219ENST00000560884 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
CPNE6-219ENST00000560884 TESK2Q96S53 571 aa18.63■□□□□ 0.57
CPNE6-219ENST00000560884 USP47Q96K76 1375 aa18.63■□□□□ 0.57
CPNE6-219ENST00000560884 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
CPNE6-219ENST00000560884 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
CPNE6-219ENST00000560884 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
CPNE6-219ENST00000560884 RXRBP28702 533 aa18.62■□□□□ 0.57
CPNE6-219ENST00000560884 QTRT2Q9H974 415 aaKnown RBP18.62■□□□□ 0.57
CPNE6-219ENST00000560884 SLIT3O75094 1523 aa18.61■□□□□ 0.57
CPNE6-219ENST00000560884 PLEKHG5O94827 1062 aa18.61■□□□□ 0.57
CPNE6-219ENST00000560884 HAP1P54257 671 aaPredicted RBP18.61■□□□□ 0.57
CPNE6-219ENST00000560884 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
CPNE6-219ENST00000560884 USP19O94966 1318 aa18.6■□□□□ 0.57
CPNE6-219ENST00000560884 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
CPNE6-219ENST00000560884 RBM6P78332 1123 aaKnown RBP18.59■□□□□ 0.57
CPNE6-219ENST00000560884 TRPC5Q9UL62 973 aaPredicted RBP18.59■□□□□ 0.57
CPNE6-219ENST00000560884 MYOM1P52179 1685 aa18.58■□□□□ 0.57
CPNE6-219ENST00000560884 NUTM2GQ5VZR2 741 aa18.57■□□□□ 0.56
CPNE6-219ENST00000560884 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
CPNE6-219ENST00000560884 BRWD3Q6RI45 1802 aa18.56■□□□□ 0.56
CPNE6-219ENST00000560884 FAM83GA6ND36 823 aa18.56■□□□□ 0.56
CPNE6-219ENST00000560884 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
CPNE6-219ENST00000560884 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
CPNE6-219ENST00000560884 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
CPNE6-219ENST00000560884 KTN1Q86UP2 1357 aaKnown RBP18.54■□□□□ 0.56
CPNE6-219ENST00000560884 COL18A1P39060 1754 aa18.53■□□□□ 0.56
CPNE6-219ENST00000560884 ZNF692Q9BU19 519 aaPredicted RBP18.53■□□□□ 0.56
CPNE6-219ENST00000560884 CPDO75976 1380 aa18.53■□□□□ 0.56
CPNE6-219ENST00000560884 TTC21BQ7Z4L5 1316 aa18.52■□□□□ 0.56
CPNE6-219ENST00000560884 GJD4Q96KN9 370 aaPredicted RBP18.52■□□□□ 0.56
CPNE6-219ENST00000560884 NFAT5O94916 1531 aa18.52■□□□□ 0.56
CPNE6-219ENST00000560884 A0A1W2PP64 1363 aa18.52■□□□□ 0.55
CPNE6-219ENST00000560884 NINLQ9Y2I6 1382 aa18.52■□□□□ 0.55
CPNE6-219ENST00000560884 VPS72Q15906 364 aa18.51■□□□□ 0.55
CPNE6-219ENST00000560884 CAMTA1Q9Y6Y1 1673 aa18.5■□□□□ 0.55
CPNE6-219ENST00000560884 TTC21AQ8NDW8 1320 aa18.5■□□□□ 0.55
CPNE6-219ENST00000560884 EDC4Q6P2E9 1401 aaKnown RBP18.5■□□□□ 0.55
CPNE6-219ENST00000560884 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
CPNE6-219ENST00000560884 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
CPNE6-219ENST00000560884 PRDM11Q9NQV5 511 aa18.5■□□□□ 0.55
CPNE6-219ENST00000560884 BTG4Q9NY30 223 aa18.5■□□□□ 0.55
CPNE6-219ENST00000560884 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
CPNE6-219ENST00000560884 RGPD5Q99666 1765 aa18.49■□□□□ 0.55
CPNE6-219ENST00000560884 LTN1O94822 1766 aa18.48■□□□□ 0.55
CPNE6-219ENST00000560884 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
CPNE6-219ENST00000560884 GCP02774 474 aa18.48■□□□□ 0.55
CPNE6-219ENST00000560884 ZC3H6P61129 1189 aaKnown RBP18.48■□□□□ 0.55
CPNE6-219ENST00000560884 NLRP6P59044 892 aa18.47■□□□□ 0.55
CPNE6-219ENST00000560884 CHRNA2Q15822 529 aa18.47■□□□□ 0.55
CPNE6-219ENST00000560884 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
CPNE6-219ENST00000560884 USP31Q70CQ4 1352 aa18.46■□□□□ 0.55
CPNE6-219ENST00000560884 EP400Q96L91 3159 aa18.46■□□□□ 0.55
CPNE6-219ENST00000560884 TMF1P82094 1093 aa18.46■□□□□ 0.55
CPNE6-219ENST00000560884 KIF20BQ96Q89 1820 aa18.46■□□□□ 0.55
CPNE6-219ENST00000560884 ABCC6O95255 1503 aa18.45■□□□□ 0.54
CPNE6-219ENST00000560884 WNK3Q9BYP7 1800 aa18.45■□□□□ 0.54
CPNE6-219ENST00000560884 OVOS2A0A0J9YW53 1432 aa18.45■□□□□ 0.54
CPNE6-219ENST00000560884 OVOS2Q6IE36 1432 aa18.45■□□□□ 0.54
CPNE6-219ENST00000560884 COL5A2P05997 1499 aaPredicted RBP18.45■□□□□ 0.54
CPNE6-219ENST00000560884 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
CPNE6-219ENST00000560884 HDGFL2Q7Z4V5 671 aaPredicted RBP18.44■□□□□ 0.54
CPNE6-219ENST00000560884 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
CPNE6-219ENST00000560884 SPATA31A5Q5VU36 1347 aa18.43■□□□□ 0.54
CPNE6-219ENST00000560884 SPATA31A7Q8IWB4 1347 aa18.43■□□□□ 0.54
CPNE6-219ENST00000560884 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
CPNE6-219ENST00000560884 NME9Q86XW9 330 aa18.42■□□□□ 0.54
CPNE6-219ENST00000560884 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
CPNE6-219ENST00000560884 UPF1Q92900 1129 aaKnown RBP eCLIP18.42■□□□□ 0.54
CPNE6-219ENST00000560884 ZRANB1Q9UGI0 708 aa18.42■□□□□ 0.54
CPNE6-219ENST00000560884 AATKQ6ZMQ8 1374 aa18.42■□□□□ 0.54
CPNE6-219ENST00000560884 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
CPNE6-219ENST00000560884 PARP4Q9UKK3 1724 aaKnown RBP18.39■□□□□ 0.53
CPNE6-219ENST00000560884 SPATA31A1Q5TZJ5 1347 aa18.39■□□□□ 0.53
CPNE6-219ENST00000560884 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
CPNE6-219ENST00000560884 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
CPNE6-219ENST00000560884 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
CPNE6-219ENST00000560884 SEPT12Q8IYM1 358 aa18.38■□□□□ 0.53
CPNE6-219ENST00000560884 KCNH5Q8NCM2 988 aa18.38■□□□□ 0.53
CPNE6-219ENST00000560884 EIF4G2P78344 907 aaKnown RBP eCLIP18.37■□□□□ 0.53
CPNE6-219ENST00000560884 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms