RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 SSH2Q76I76 1423 aa20.94■□□□□ 0.94
PSME1-207ENST00000560420 PHRF1Q9P1Y6 1649 aaKnown RBP20.93■□□□□ 0.94
PSME1-207ENST00000560420 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
PSME1-207ENST00000560420 NWD2Q9ULI1 1742 aa20.93■□□□□ 0.94
PSME1-207ENST00000560420 QTRT2Q9H974 415 aaKnown RBP20.93■□□□□ 0.94
PSME1-207ENST00000560420 USP21Q9UK80 565 aa20.93■□□□□ 0.94
PSME1-207ENST00000560420 RGS12O14924 1447 aa20.93■□□□□ 0.94
PSME1-207ENST00000560420 RXRBP28702 533 aa20.92■□□□□ 0.94
PSME1-207ENST00000560420 BRD4O60885 1362 aaPredicted RBP20.92■□□□□ 0.94
PSME1-207ENST00000560420 USP6P35125 1406 aa20.91■□□□□ 0.94
PSME1-207ENST00000560420 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
PSME1-207ENST00000560420 TIMELESSQ9UNS1 1208 aa20.91■□□□□ 0.94
PSME1-207ENST00000560420 NRAPQ86VF7 1730 aa20.9■□□□□ 0.94
PSME1-207ENST00000560420 TRPC5Q9UL62 973 aaPredicted RBP20.9■□□□□ 0.94
PSME1-207ENST00000560420 AKAP12Q02952 1782 aa20.9■□□□□ 0.94
PSME1-207ENST00000560420 NRKQ7Z2Y5 1582 aa20.89■□□□□ 0.93
PSME1-207ENST00000560420 CPSF1Q10570 1443 aaKnown RBP20.88■□□□□ 0.93
PSME1-207ENST00000560420 ATAD2Q6PL18 1390 aa20.88■□□□□ 0.93
PSME1-207ENST00000560420 TESK2Q96S53 571 aa20.88■□□□□ 0.93
PSME1-207ENST00000560420 CABP1Q9NZU7 370 aa20.88■□□□□ 0.93
PSME1-207ENST00000560420 GLI3P10071 1580 aa20.88■□□□□ 0.93
PSME1-207ENST00000560420 USP19O94966 1318 aa20.87■□□□□ 0.93
PSME1-207ENST00000560420 LMOD2Q6P5Q4 547 aa20.87■□□□□ 0.93
PSME1-207ENST00000560420 COL14A1Q05707 1796 aaKnown RBP20.87■□□□□ 0.93
PSME1-207ENST00000560420 UNC5CLQ8IV45 518 aa20.86■□□□□ 0.93
PSME1-207ENST00000560420 CD163L1Q9NR16 1453 aa20.86■□□□□ 0.93
PSME1-207ENST00000560420 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
PSME1-207ENST00000560420 PIK3C2AO00443 1686 aa20.85■□□□□ 0.93
PSME1-207ENST00000560420 PAK3O75914 559 aaPredicted RBP20.84■□□□□ 0.93
PSME1-207ENST00000560420 MON2Q7Z3U7 1717 aa20.84■□□□□ 0.93
PSME1-207ENST00000560420 PUS7Q96PZ0 661 aaKnown RBP20.83■□□□□ 0.93
PSME1-207ENST00000560420 SLIT3O75094 1523 aa20.83■□□□□ 0.92
PSME1-207ENST00000560420 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
PSME1-207ENST00000560420 GJD4Q96KN9 370 aaPredicted RBP20.81■□□□□ 0.92
PSME1-207ENST00000560420 LMO7Q8WWI1 1683 aa20.8■□□□□ 0.92
PSME1-207ENST00000560420 HAP1P54257 671 aaPredicted RBP20.8■□□□□ 0.92
PSME1-207ENST00000560420 VPS72Q15906 364 aa20.8■□□□□ 0.92
PSME1-207ENST00000560420 CPDO75976 1380 aa20.8■□□□□ 0.92
PSME1-207ENST00000560420 USP47Q96K76 1375 aa20.8■□□□□ 0.92
PSME1-207ENST00000560420 EP400Q96L91 3159 aa20.8■□□□□ 0.92
PSME1-207ENST00000560420 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
PSME1-207ENST00000560420 PLEKHG5O94827 1062 aa20.79■□□□□ 0.92
PSME1-207ENST00000560420 KIAA0232Q92628 1395 aa20.79■□□□□ 0.92
PSME1-207ENST00000560420 ABTB2Q8N961 1025 aa20.78■□□□□ 0.92
PSME1-207ENST00000560420 NUTM2GQ5VZR2 741 aa20.77■□□□□ 0.92
PSME1-207ENST00000560420 ZNF692Q9BU19 519 aaPredicted RBP20.77■□□□□ 0.92
PSME1-207ENST00000560420 TTC21BQ7Z4L5 1316 aa20.76■□□□□ 0.91
PSME1-207ENST00000560420 ONECUT3O60422 494 aaPredicted RBP20.75■□□□□ 0.91
PSME1-207ENST00000560420 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
PSME1-207ENST00000560420 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
PSME1-207ENST00000560420 UPF1Q92900 1129 aaKnown RBP eCLIP20.74■□□□□ 0.91
PSME1-207ENST00000560420 PRDM11Q9NQV5 511 aa20.74■□□□□ 0.91
PSME1-207ENST00000560420 TTC21AQ8NDW8 1320 aa20.74■□□□□ 0.91
PSME1-207ENST00000560420 CAMTA1Q9Y6Y1 1673 aa20.73■□□□□ 0.91
PSME1-207ENST00000560420 NINLQ9Y2I6 1382 aa20.73■□□□□ 0.91
PSME1-207ENST00000560420 GCP02774 474 aa20.73■□□□□ 0.91
PSME1-207ENST00000560420 KTN1Q86UP2 1357 aaKnown RBP20.72■□□□□ 0.91
PSME1-207ENST00000560420 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
PSME1-207ENST00000560420 CCER1Q8TC90 406 aaPredicted RBP20.72■□□□□ 0.91
PSME1-207ENST00000560420 SLC12A5Q9H2X9 1139 aa20.72■□□□□ 0.91
PSME1-207ENST00000560420 NFAT5O94916 1531 aa20.72■□□□□ 0.91
PSME1-207ENST00000560420 COL18A1P39060 1754 aa20.72■□□□□ 0.91
PSME1-207ENST00000560420 A0A1W2PP64 1363 aa20.72■□□□□ 0.91
PSME1-207ENST00000560420 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
PSME1-207ENST00000560420 USP31Q70CQ4 1352 aa20.71■□□□□ 0.91
PSME1-207ENST00000560420 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.91
PSME1-207ENST00000560420 EDC4Q6P2E9 1401 aaKnown RBP20.7■□□□□ 0.9
PSME1-207ENST00000560420 BRWD3Q6RI45 1802 aa20.7■□□□□ 0.9
PSME1-207ENST00000560420 CHRNA2Q15822 529 aa20.7■□□□□ 0.9
PSME1-207ENST00000560420 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
PSME1-207ENST00000560420 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
PSME1-207ENST00000560420 NLRP6P59044 892 aa20.68■□□□□ 0.9
PSME1-207ENST00000560420 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
PSME1-207ENST00000560420 COL5A2P05997 1499 aaPredicted RBP20.67■□□□□ 0.9
PSME1-207ENST00000560420 OVOS2A0A0J9YW53 1432 aa20.66■□□□□ 0.9
PSME1-207ENST00000560420 OVOS2Q6IE36 1432 aa20.66■□□□□ 0.9
PSME1-207ENST00000560420 ABCC6O95255 1503 aa20.66■□□□□ 0.9
PSME1-207ENST00000560420 MYOM1P52179 1685 aa20.66■□□□□ 0.9
PSME1-207ENST00000560420 SPATA31A1Q5TZJ5 1347 aa20.65■□□□□ 0.9
PSME1-207ENST00000560420 ANKRD36BQ8N2N9 1353 aa20.64■□□□□ 0.89
PSME1-207ENST00000560420 SEPT12Q8IYM1 358 aa20.64■□□□□ 0.89
PSME1-207ENST00000560420 TMC1Q8TDI8 760 aa20.64■□□□□ 0.89
PSME1-207ENST00000560420 TMF1P82094 1093 aa20.63■□□□□ 0.89
PSME1-207ENST00000560420 HDGFL2Q7Z4V5 671 aaPredicted RBP20.63■□□□□ 0.89
PSME1-207ENST00000560420 ARHGEF25Q86VW2 580 aa20.63■□□□□ 0.89
PSME1-207ENST00000560420 TERF2IPQ9NYB0 399 aa20.63■□□□□ 0.89
PSME1-207ENST00000560420 NME9Q86XW9 330 aa20.62■□□□□ 0.89
PSME1-207ENST00000560420 ZRANB1Q9UGI0 708 aa20.62■□□□□ 0.89
PSME1-207ENST00000560420 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
PSME1-207ENST00000560420 KCNH5Q8NCM2 988 aa20.6■□□□□ 0.89
PSME1-207ENST00000560420 CCDC9Q9Y3X0 531 aaKnown RBP20.6■□□□□ 0.89
PSME1-207ENST00000560420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.59■□□□□ 0.89
PSME1-207ENST00000560420 LARP1Q6PKG0 1096 aaKnown RBP20.58■□□□□ 0.89
PSME1-207ENST00000560420 BARGINQ6ZT62 677 aa20.58■□□□□ 0.89
PSME1-207ENST00000560420 AXIN2Q9Y2T1 843 aa20.58■□□□□ 0.89
PSME1-207ENST00000560420 STRN4Q9NRL3 753 aa20.57■□□□□ 0.88
PSME1-207ENST00000560420 CRB1P82279 1406 aa20.56■□□□□ 0.88
PSME1-207ENST00000560420 CDCA8Q53HL2 280 aa20.56■□□□□ 0.88
PSME1-207ENST00000560420 RGPD5Q99666 1765 aa20.56■□□□□ 0.88
PSME1-207ENST00000560420 KRT27Q7Z3Y8 459 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms