RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	NOL10	Q9BSC4	688 aa	Known RBP	11.38	□□□□□ -0.59
NEO1-208	ENST00000560328	CPLX2	Q6PUV4	134 aa	Known RBP	11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	WWC1	Q8IX03	1113 aa		11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	CHMP5	Q9NZZ3	219 aa		11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	DENND4B	O75064	1496 aa	Predicted RBP	11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	CLASRP	Q8N2M8	674 aa	Known RBP	11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	ATF7IP	Q6VMQ6	1270 aa		11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	DHX29	Q7Z478	1369 aa	Known RBP	11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	GNAI2	P04899	355 aa		11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	RBM42	Q9BTD8	480 aa	Known RBP	11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	ATP10B	O94823	1461 aa		11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	TRDN	Q13061	729 aa		11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	TOM1L2	Q6ZVM7	507 aa		11.37	□□□□□ -0.59
NEO1-208	ENST00000560328	TMPO	P42166	694 aa	Known RBP	11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	RAPGEF6	Q8TEU7	1601 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	MARCH6	O60337	910 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	AMOTL1	Q8IY63	956 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	GCC1	Q96CN9	775 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	FAM135A	Q9P2D6	1515 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	CPLX1	O14810	134 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	SLFN5	Q08AF3	891 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	CREBRF	Q8IUR6	639 aa		11.36	□□□□□ -0.59
NEO1-208	ENST00000560328	NFE2L2	Q16236	605 aa		11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	CABP4	P57796	275 aa		11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	SPG7	Q9UQ90	795 aa		11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	PTPRK	Q15262	1439 aa		11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	CCT4	P50991	539 aa	Known RBP	11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	GSE1	Q14687	1217 aa		11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	MVP	Q14764	893 aa	Known RBP	11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	CNTROB	Q8N137	903 aa		11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	DDX54	Q8TDD1	881 aa	Known RBP	11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	NOS1	P29475	1434 aa		11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	CEBPA	P49715	358 aa	Predicted RBP	11.35	□□□□□ -0.59
NEO1-208	ENST00000560328	WASHC4	Q2M389	1173 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	UGGT2	Q9NYU1	1516 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	NUP153	P49790	1475 aa	Known RBP	11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	NINL	Q9Y2I6	1382 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	TRIM29	Q14134	588 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	VPS53	Q5VIR6	699 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	KIF6	Q6ZMV9	814 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	NME9	Q86XW9	330 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	FSD1	Q9BTV5	496 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	SMC3	Q9UQE7	1217 aa		11.34	□□□□□ -0.59
NEO1-208	ENST00000560328	FAM177B	A6PVY3	158 aa		11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	PRDM11	Q9NQV5	511 aa		11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	ZC3H6	P61129	1189 aa	Known RBP	11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	C14orf93	Q9H972	538 aa	Known RBP	11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	SCAF11	Q99590	1463 aa	Known RBP	11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	SRCIN1	Q9C0H9	1055 aa		11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	PLCH2	O75038	1416 aa		11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	NFXL1	Q6ZNB6	911 aa		11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	AMOTL2	Q9Y2J4	779 aa		11.33	□□□□□ -0.6
NEO1-208	ENST00000560328	WASL	O00401	505 aa	Predicted RBP	11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	FBXW7	Q969H0	707 aa		11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	VPS37C	A5D8V6	355 aa	Predicted RBP	11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	RBM33	Q96EV2	1170 aa	Known RBP	11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	NUCB2	P80303	420 aa		11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	PPP6R1	Q9UPN7	881 aa		11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	KCNH5	Q8NCM2	988 aa		11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	THUMPD2	Q9BTF0	503 aa	Known RBP	11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	BTBD11	A6QL63	1104 aa		11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	RAD21	O60216	631 aa		11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.32	□□□□□ -0.6
NEO1-208	ENST00000560328	ERC1	Q8IUD2	1116 aa		11.31	□□□□□ -0.6
NEO1-208	ENST00000560328	MYL6B	P14649	208 aa		11.31	□□□□□ -0.6
NEO1-208	ENST00000560328	TRIM34	Q9BYJ4	488 aa		11.31	□□□□□ -0.6
NEO1-208	ENST00000560328	GNAT3	A8MTJ3	354 aa		11.31	□□□□□ -0.6
NEO1-208	ENST00000560328	ZNF428	Q96B54	188 aa		11.31	□□□□□ -0.6
NEO1-208	ENST00000560328	ERICH2	A1L162	156 aa		11.31	□□□□□ -0.6
NEO1-208	ENST00000560328	DNAJC2	Q99543	621 aa	Known RBP	11.31	□□□□□ -0.6
NEO1-208	ENST00000560328	RALYL	Q86SE5	291 aa	Known RBP	11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	NUTM2E	B1AL46	878 aa	Predicted RBP	11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	MCM10	Q7L590	875 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	MIS18A	Q9NYP9	233 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	KDM5B	Q9UGL1	1544 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	EMILIN1	Q9Y6C2	1016 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	DISP3	Q9P2K9	1392 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	BECN2	A8MW95	431 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	GOLGA6L19	H0YKK7	550 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	ASXL2	Q76L83	1435 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	CCDC27	Q2M243	656 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	LRRCC1	Q9C099	1032 aa		11.3	□□□□□ -0.6
NEO1-208	ENST00000560328	DCTN1	Q14203	1278 aa		11.29	□□□□□ -0.6
NEO1-208	ENST00000560328	PSMA5	P28066	241 aa		11.29	□□□□□ -0.6
NEO1-208	ENST00000560328	TPD52L1	Q16890	204 aa	Predicted RBP	11.29	□□□□□ -0.6
NEO1-208	ENST00000560328	BICD2	Q8TD16	824 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	DHX16	O60231	1041 aa	Known RBP	11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	FOSB	P53539	338 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	SIL1	Q9H173	461 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	CTTNBP2	Q8WZ74	1663 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	FYB1	O15117	783 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	CHD1L	Q86WJ1	897 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	TMEM57	Q8N5G2	664 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	PHF8	Q9UPP1	1060 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	NEK4	P51957	841 aa		11.28	□□□□□ -0.6
NEO1-208	ENST00000560328	SYCP2	Q9BX26	1530 aa		11.27	□□□□□ -0.6
NEO1-208	ENST00000560328	HIP1	O00291	1037 aa		11.27	□□□□□ -0.6
NEO1-208	ENST00000560328	PES1	O00541	588 aa	Known RBP	11.27	□□□□□ -0.6

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