RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 LIAT1Q6ZQX7 453 aa9.43□□□□□ -0.9
CLPX-206ENST00000560166 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
CLPX-206ENST00000560166 STK17AQ9UEE5 414 aa9.43□□□□□ -0.9
CLPX-206ENST00000560166 MADDQ8WXG6 1647 aa9.42□□□□□ -0.9
CLPX-206ENST00000560166 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
CLPX-206ENST00000560166 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
CLPX-206ENST00000560166 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
CLPX-206ENST00000560166 NCOA2Q15596 1464 aa9.41□□□□□ -0.9
CLPX-206ENST00000560166 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
CLPX-206ENST00000560166 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
CLPX-206ENST00000560166 MIA2Q96PC5 1412 aa9.4□□□□□ -0.9
CLPX-206ENST00000560166 SUPT6HQ7KZ85 1726 aaKnown RBP9.4□□□□□ -0.9
CLPX-206ENST00000560166 PLEKHD1A6NEE1 506 aa9.4□□□□□ -0.9
CLPX-206ENST00000560166 WFS1O76024 890 aa9.4□□□□□ -0.9
CLPX-206ENST00000560166 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
CLPX-206ENST00000560166 MYOM3Q5VTT5 1437 aa9.39□□□□□ -0.91
CLPX-206ENST00000560166 PHLDB1Q86UU1 1377 aa9.39□□□□□ -0.91
CLPX-206ENST00000560166 CCNB3Q8WWL7 1395 aa9.39□□□□□ -0.91
CLPX-206ENST00000560166 RIMS1Q86UR5 1692 aaKnown RBP9.39□□□□□ -0.91
CLPX-206ENST00000560166 PPARGC1BQ86YN6 1023 aaKnown RBP9.39□□□□□ -0.91
CLPX-206ENST00000560166 TTC13Q8NBP0 860 aa9.39□□□□□ -0.91
CLPX-206ENST00000560166 PCDHB3Q9Y5E6 796 aa9.39□□□□□ -0.91
CLPX-206ENST00000560166 BCORL1Q5H9F3 1711 aa9.39□□□□□ -0.91
CLPX-206ENST00000560166 TNFRSF10AO00220 468 aa9.38□□□□□ -0.91
CLPX-206ENST00000560166 WIPF1O43516 503 aa9.38□□□□□ -0.91
CLPX-206ENST00000560166 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
CLPX-206ENST00000560166 CRIPAKQ8N1N5 446 aa9.38□□□□□ -0.91
CLPX-206ENST00000560166 FGD6Q6ZV73 1430 aa9.38□□□□□ -0.91
CLPX-206ENST00000560166 ARID3CA6NKF2 412 aa9.37□□□□□ -0.91
CLPX-206ENST00000560166 SEMA3EO15041 775 aa9.37□□□□□ -0.91
CLPX-206ENST00000560166 TMEM132AQ24JP5 1023 aa9.37□□□□□ -0.91
CLPX-206ENST00000560166 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
CLPX-206ENST00000560166 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
CLPX-206ENST00000560166 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
CLPX-206ENST00000560166 KIF14Q15058 1648 aa9.37□□□□□ -0.91
CLPX-206ENST00000560166 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
CLPX-206ENST00000560166 PPEF1O14829 653 aaPredicted RBP9.36□□□□□ -0.91
CLPX-206ENST00000560166 TCOF1Q13428 1488 aaKnown RBP9.35□□□□□ -0.91
CLPX-206ENST00000560166 SLC4A3P48751 1232 aa9.35□□□□□ -0.91
CLPX-206ENST00000560166 CDHR5Q9HBB8 845 aa9.35□□□□□ -0.91
CLPX-206ENST00000560166 INSM1Q01101 510 aaPredicted RBP9.34□□□□□ -0.91
CLPX-206ENST00000560166 NFX1Q12986 1120 aaKnown RBP9.34□□□□□ -0.91
CLPX-206ENST00000560166 MLECQ14165 292 aa9.34□□□□□ -0.91
CLPX-206ENST00000560166 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
CLPX-206ENST00000560166 TESPA1A2RU30 521 aaPredicted RBP9.33□□□□□ -0.92
CLPX-206ENST00000560166 TLL1O43897 1013 aa9.33□□□□□ -0.92
CLPX-206ENST00000560166 S1PR4O95977 384 aa9.33□□□□□ -0.92
CLPX-206ENST00000560166 OSBPP22059 807 aa9.33□□□□□ -0.92
CLPX-206ENST00000560166 EYA1Q99502 592 aa9.33□□□□□ -0.92
CLPX-206ENST00000560166 GPATCH8Q9UKJ3 1502 aaKnown RBP9.32□□□□□ -0.92
CLPX-206ENST00000560166 LOC100996750A0A140TA64 210 aa9.32□□□□□ -0.92
CLPX-206ENST00000560166 GRXCR2A6NFK2 248 aa9.32□□□□□ -0.92
CLPX-206ENST00000560166 KRTAP4-6Q9BYQ5 205 aa9.32□□□□□ -0.92
CLPX-206ENST00000560166 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
CLPX-206ENST00000560166 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
CLPX-206ENST00000560166 AVPP01185 164 aa9.31□□□□□ -0.92
CLPX-206ENST00000560166 PKD2L1Q9P0L9 805 aa9.31□□□□□ -0.92
CLPX-206ENST00000560166 POGZQ7Z3K3 1410 aa9.31□□□□□ -0.92
CLPX-206ENST00000560166 NPDC1Q9NQX5 325 aaPredicted RBP9.3□□□□□ -0.92
CLPX-206ENST00000560166 ARIH1Q9Y4X5 557 aaPredicted RBP9.3□□□□□ -0.92
CLPX-206ENST00000560166 PADI6Q6TGC4 694 aa9.29□□□□□ -0.92
CLPX-206ENST00000560166 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
CLPX-206ENST00000560166 PTPN23Q9H3S7 1636 aa9.29□□□□□ -0.92
CLPX-206ENST00000560166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLPX-206ENST00000560166 AKNAQ7Z591 1439 aa9.29□□□□□ -0.92
CLPX-206ENST00000560166 FANCAO15360 1455 aa9.28□□□□□ -0.92
CLPX-206ENST00000560166 PLEKHH2Q8IVE3 1493 aa9.28□□□□□ -0.92
CLPX-206ENST00000560166 C11orf95C9JLR9 678 aaPredicted RBP9.28□□□□□ -0.92
CLPX-206ENST00000560166 BRPF1P55201 1214 aaPredicted RBP9.28□□□□□ -0.92
CLPX-206ENST00000560166 PLA2G2CQ5R387 149 aa9.28□□□□□ -0.92
CLPX-206ENST00000560166 CFDP1Q9UEE9 299 aaPredicted RBP9.28□□□□□ -0.92
CLPX-206ENST00000560166 PLCH2O75038 1416 aa9.28□□□□□ -0.92
CLPX-206ENST00000560166 YEATS2Q9ULM3 1422 aa9.28□□□□□ -0.92
CLPX-206ENST00000560166 NEO1Q92859 1461 aa9.28□□□□□ -0.92
CLPX-206ENST00000560166 ARHGEF40Q8TER5 1519 aa9.27□□□□□ -0.93
CLPX-206ENST00000560166 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
CLPX-206ENST00000560166 KIAA1107Q9UPP5 1409 aa9.27□□□□□ -0.93
CLPX-206ENST00000560166 FRMPD1Q5SYB0 1578 aa9.27□□□□□ -0.93
CLPX-206ENST00000560166 PREX2Q70Z35 1606 aa9.27□□□□□ -0.93
CLPX-206ENST00000560166 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.93
CLPX-206ENST00000560166 ACTN4O43707 911 aaKnown RBP9.26□□□□□ -0.93
CLPX-206ENST00000560166 ADH1BP00325 375 aa9.26□□□□□ -0.93
CLPX-206ENST00000560166 HRCP23327 699 aa9.26□□□□□ -0.93
CLPX-206ENST00000560166 FAM50AQ14320 339 aaKnown RBP9.26□□□□□ -0.93
CLPX-206ENST00000560166 RSPH4AQ5TD94 716 aa9.26□□□□□ -0.93
CLPX-206ENST00000560166 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
CLPX-206ENST00000560166 CAMSAP2Q08AD1 1489 aa9.26□□□□□ -0.93
CLPX-206ENST00000560166 ACIN1Q9UKV3 1341 aaKnown RBP9.26□□□□□ -0.93
CLPX-206ENST00000560166 ROCK1Q13464 1354 aa9.25□□□□□ -0.93
CLPX-206ENST00000560166 TTC37Q6PGP7 1564 aa9.25□□□□□ -0.93
CLPX-206ENST00000560166 AXIN1O15169 862 aa9.25□□□□□ -0.93
CLPX-206ENST00000560166 CEBPAP49715 358 aaPredicted RBP9.25□□□□□ -0.93
CLPX-206ENST00000560166 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
CLPX-206ENST00000560166 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
CLPX-206ENST00000560166 TOR4AQ9NXH8 423 aa9.25□□□□□ -0.93
CLPX-206ENST00000560166 SHANK2Q9UPX8 1470 aa9.25□□□□□ -0.93
CLPX-206ENST00000560166 FER1L4A9Z1Z3 1794 aa9.24□□□□□ -0.93
CLPX-206ENST00000560166 DENND4BO75064 1496 aaPredicted RBP9.24□□□□□ -0.93
CLPX-206ENST00000560166 NEUROD2Q15784 382 aa9.24□□□□□ -0.93
CLPX-206ENST00000560166 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms